Dictyostelium discoideum cDNA Clone FC-AG09

Size:		456
3' sequence:	HS961118
5' sequence:	-
Whole insert?:	Y
Accession #:	C23650
Remarks:	*

Sequence FC-AG09

ATTTGCAACG TTGAAGAAAA ACTCGGTGAT TGTGGTGCTG TTGCTCGTTG
TTCAGGTAAC TATGCTACCA TCGTCTCACA CAACCCAGAT GAAGGTGTTA
CCCGTATCAA ATTACCATCA GGTTCAAAGA AGAACGTTTC TTCATTAGCT
CGTGCTATGA TCGGTATTGT TGCCGGTGGT GGTCGTATCG ATAAACCAAT
GCTCAAAGCT GGTCGTGCTT TCCACAAATA CAGAGTTAAG AAGAATAACT
GGCCAAAGGT TAGAGGTGTT GCTATGAATC CAGTAGAACA TCCACACGGT
GGTGGTAATC ATCAACATGT TGGTCATGCC ACTACAACCA AGAGAGACGA
TCCAGCTGGT AAGAAAGTTG GTTTAATTGC TGCCCGTCGT ACTGGTCGTT
TAAGAGGAAC TAAAAACATT TCAGAATAAA CAGCATTCAA AACCTTTTAT
AAATAA

Translated Amino Acid Sequence FC-AG09

ICNVEEKLGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGG
GRIDKPMLKAGRAFHKYRVKKNNWPKVRGVAMNPVEHPHGGGNHQHVGHATTTKRDDPAG
KKVGLIAARRTGRLRGTKNISE*tafktfyk*

Homology FC-AG09 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSE883 (VSE883Q) /CSM/VS/VSE8-D/VSE883Q.Seq.d/                        904   0.0
VSE183 (VSE183Q) /CSM/VS/VSE1-D/VSE183Q.Seq.d/                        904   0.0
FC-AG09 (FC-AG09Q) /CSM/FC/FC-AG/FC-AG09Q.Seq.d/                      904   0.0
VSH302 (VSH302Q) /CSM/VS/VSH3-A/VSH302Q.Seq.d/                        902   0.0
VSE252 (VSE252Q) /CSM/VS/VSE2-C/VSE252Q.Seq.d/                        902   0.0
VSB214 (VSB214Q) /CSM/VS/VSB2-A/VSB214Q.Seq.d/                        902   0.0
SLC245 (SLC245Q) /CSM/SL/SLC2-B/SLC245Q.Seq.d/                        900   0.0
SLB881 (SLB881Q) /CSM/SL/SLB8-D/SLB881Q.Seq.d/                        900   0.0
SLB815 (SLB815Q) /CSM/SL/SLB8-A/SLB815Q.Seq.d/                        900   0.0
VSC263 (VSC263Q) /CSM/VS/VSC2-C/VSC263Q.Seq.d/                        894   0.0

Homology FC-AG09 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...   902   0.0    1
X15710|X15710.1 Dictyostelium discoideum mRNA for ribosomal ...   307   0.0    5
BI773231|BI773231.1 kt03a04.y1 Strongyloides ratti L1 SL1 To...   115   2e-42  2
BQ479322|BQ479322.1 ku32g10.y1 Strongyloides ratti PA female...   115   2e-42  2
BQ479192|BQ479192.1 ku28g04.y1 Strongyloides ratti PA female...   115   2e-42  2
BQ479234|BQ479234.1 ku30d08.y1 Strongyloides ratti PA female...   115   2e-42  2
BI773235|BI773235.1 kt06g12.y1 Strongyloides ratti L3 adult ...   115   2e-42  2
BQ479216|BQ479216.1 ku29e08.y1 Strongyloides ratti PA female...   115   2e-42  2
BI704050|BI704050.1 kt78f10.y4 Strongyloides ratti L2 SL1 TO...   115   2e-42  2
BQ479440|BQ479440.1 ku36f01.y1 Strongyloides ratti PA female...    88   8e-39  3

Homology FC-AG09 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P13023) RecName: Full=60S ribosomal protein L8; AltName: Full=6...   295   5e-79
EF103429_1(EF103429|pid:none) Haliotis discus discus ribosomal p...   229   3e-59
AF156372_1(AF156372|pid:none) Nicotiana tabacum clone PR60 60S r...   228   6e-59
FJ429203_1(FJ429203|pid:none) Lepidochitona cinerea ribosomal pr...   227   2e-58
DQ252497_1(DQ252497|pid:none) Solanum tuberosum clone 068C11 rib...   227   2e-58
EU574889_1(EU574889|pid:none) Ornithodoros coriaceus clone OC-88...   224   9e-58
(Q9XVF7) RecName: Full=60S ribosomal protein L8;  &T18676(T18676...   224   1e-57
BT070439_1(BT070439|pid:none) Picea sitchensis clone WS0272_A03 ...   223   2e-57
BT078708_1(BT078708|pid:none) Lepeophtheirus salmonis Pacific fo...   223   3e-57
HQ317704_1(HQ317704|pid:none) Rana sylvatica ribosomal protein L...   223   3e-57

Homology FC-AG09 vs Genome