Dictyostelium discoideum cDNA Clone FC-AF06

Size:		2.1K
3' sequence:	AK960913
5' sequence:	AK
Whole insert?:	*
Accession #:	C23756
Remarks:	*

Sequence FC-AF06

GAGGAAAATA AAAAAAGTAG TAGTGATGAT TCAGCACCAG CCATTCAATC
TAATTTAACA TTTTCTGGTT ATATGACAGG TGGAGAACAG GTTTGTGACC
CAAAATCATG TAACAGTCCA TCAGTTTTCA CACAAAATTA CCTTTGTAAT
ACATCATCAG CATGGGCAAA TGGTTATGTT TTCCATGATC CTGTACCACC
AACTGGATTG TTTGTAGTAC ATAAGATCGT TGTAACTTTT ACTGGTATGT
TCAATGTTAT ACCTCCAACT AGTATGGTTT TTTCATTGGT AAATGGTGAA
GAAAATGCTG GTATCTTTTT CATTTCTAAA AGTTCACCTT CACAATGTCC
AAATTGTCAA ATATCTTTTT CACCTCGTAC ATTACCAGAT GTTGATCCAA
ATGGTTTAGC ATCATATAGA TATGGTAGTA ATAATTCAAT TATATTTA--
--------CA ATTGTTATTC ATAGAGATTT AAAGAGTCAT AATCTTTTAG
TTGATGAACA TTATAGAGTT AAAATTTCAG ATTTTGGTCT TTCAACTAGA
TTTAAGAAAC ATTTAGATAA AAAGACTGCA ATGACACCTG TTGGTACACC
TTGTTGGACT GCACCAGAAG TTTTAAGAAA TGACCCATAT ACTGAGAAAG
CTGATGTTTT CTCATTTGCA ATTGTTTTAT GGGAAATTGT AACAAGAGAA
GATCCATATC AAGGTATGCC AACTTTCCAA ATTGTAATTT CTGTTGGTCA
ACATAAATTA AGACCAATCG TACCACCACA AGTATCGCTC CATTCACACG
TCTTATCACT GAATGTTGGT CTGAAGATCC ACAACAAAGA CCTTCATTCC
AAGAAATCGT TAAAAGATTG GAAGCAATGT AGACTACCAA AAATTATCCA
AAAACAAAAA AACAAAAAAA CAAAAAACAA AAAAAAAATT TACAAATCAC
AAACCATAAA CCAAATTAAT ACACTACCTT TATAAATTTT TAAAAAAATG
GTTTCATGGC GACTTCCAAA CATTTAAAAC AAAAAAAAAA AAAAAAA

Translated Amino Acid Sequence FC-AF06

EENKKSSSDDSAPAIQSNLTFSGYMTGGEQVCDPKSCNSPSVFTQNYLCNTSSAWANGYV
FHDPVPPTGLFVVHKIVVTFTGMFNVIPPTSMVFSLVNGEENAGIFFISKSSPSQCPNCQ
ISFSPRTLPDVDPNGLASYRYGSNNSIIF---

---IVIHRDLKSHNLLVDEHYRVKISDFGLSTRFKKHLDKKTAMTPVGTPCWTAPEVLRN
DPYTEKADVFSFAIVLWEIVTREDPYQGMPTFQIVISVGQHKLRPIVPPQVSLHSHVLSL
NVGLKIHNKDLHSKKSLKDWKQCRLPKIIQKQKNKKTKNKKKIYKSQTINQINTLPL*if
kkmvswrlpni*nkkkkk

Homology FC-AF06 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AF06 (FC-AF06Q) /CSM/FC/FC-AF/FC-AF06Q.Seq.d/                     1669   0.0
CFJ144 (CFJ144Q) /CSM/CF/CFJ1-B/CFJ144Q.Seq.d/                        351   1e-95
CHP817 (CHP817Q) /CSM/CH/CHP8-A/CHP817Q.Seq.d/                        196   5e-49
VHA413 (VHA413Q) /CSM/VH/VHA4-A/VHA413Q.Seq.d/                        125   1e-27
VHC610 (VHC610Q) /CSM/VH/VHC6-A/VHC610Q.Seq.d/                         94   5e-18
CHF507 (CHF507Q) /CSM/CH/CHF5-A/CHF507Q.Seq.d/                         90   8e-17
VFG871 (VFG871Q) /CSM/VF/VFG8-C/VFG871Q.Seq.d/                         44   0.004
VFF415 (VFF415Q) /CSM/VF/VFF4-A/VFF415Q.Seq.d/                         44   0.004
VFF409 (VFF409Q) /CSM/VF/VFF4-A/VFF409Q.Seq.d/                         44   0.004
VFF240 (VFF240Q) /CSM/VF/VFF2-B/VFF240Q.Seq.d/                         44   0.004

Homology FC-AF06 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C23756) Dictyostelium discoideum gamete cDNA, clone FC-AF06.     850   0.0    2
(C23755) Dictyostelium discoideum gamete cDNA, clone FC-AF06.     856   0.0    1
(BJ375611) Dictyostelium discoideum cDNA clone:ddc19g11, 3' ...   351   4e-92  1
(BJ383432) Dictyostelium discoideum cDNA clone:ddc53b06, 3' ...   196   1e-45  1
(BJ436420) Dictyostelium discoideum cDNA clone:ddv31j04, 3' ...   125   4e-24  1
(BJ437990) Dictyostelium discoideum cDNA clone:ddv36c04, 3' ...    94   1e-14  1
(BJ378890) Dictyostelium discoideum cDNA clone:ddc33m01, 3' ...    90   2e-13  1
(BU582405) PL N82 P.lunula ZAP-cDNA library Pyrocystis lunul...    48   2e-07  3
(AC116989) Dictyostelium discoideum chromosome 2 map 4545040...    36   5e-04  6
(BJ362850) Dictyostelium discoideum cDNA clone:ddc23c23, 5' ...    40   0.002  2

Homology FC-AF06 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54TA1) RecName: Full=Probable serine/threonine-protein kinase ...   312   2e-83
(Q54H46) RecName: Full=Probable serine/threonine-protein kinase ...   138   1e-33
(Q54H45) RecName: Full=Probable serine/threonine-protein kinase ...   137   8e-33
AC116989_2(AC116989|pid:none) Dictyostelium discoideum chromosom...   109   3e-27
(Q55A09) RecName: Full=Probable serine/threonine-protein kinase ...   109   3e-27
BT084504_1(BT084504|pid:none) Zea mays full-length cDNA clone ZM...   104   1e-26
AK370509_1(AK370509|pid:none) Hordeum vulgare subsp. vulgare mRN...   103   2e-26
CP002688_5535(CP002688|pid:none) Arabidopsis thaliana chromosome...   105   1e-25
CP002688_5534(CP002688|pid:none) Arabidopsis thaliana chromosome...   103   3e-25
CP002688_5537(CP002688|pid:none) Arabidopsis thaliana chromosome...   103   3e-25

Homology FC-AF06 vs Genome