Homology FC-AF06 vs DNA
Query= FC-AF06 (FC-AF06Q) /CSM/FC/FC-AF/FC-AF06Q.Seq.d/
(1047 letters)
Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C23756) Dictyostelium discoideum gamete cDNA, clone FC-AF06. 850 0.0 2
(C23755) Dictyostelium discoideum gamete cDNA, clone FC-AF06. 856 0.0 1
(BJ375611) Dictyostelium discoideum cDNA clone:ddc19g11, 3' ... 351 4e-92 1
(BJ383432) Dictyostelium discoideum cDNA clone:ddc53b06, 3' ... 196 1e-45 1
(BJ436420) Dictyostelium discoideum cDNA clone:ddv31j04, 3' ... 125 4e-24 1
(BJ437990) Dictyostelium discoideum cDNA clone:ddv36c04, 3' ... 94 1e-14 1
(BJ378890) Dictyostelium discoideum cDNA clone:ddc33m01, 3' ... 90 2e-13 1
(BU582405) PL N82 P.lunula ZAP-cDNA library Pyrocystis lunul... 48 2e-07 3
(AC116989) Dictyostelium discoideum chromosome 2 map 4545040... 36 5e-04 6
(BJ362850) Dictyostelium discoideum cDNA clone:ddc23c23, 5' ... 40 0.002 2
(BJ410459) Dictyostelium discoideum cDNA clone:ddv12k13, 5' ... 40 0.003 2
(BJ389260) Dictyostelium discoideum cDNA clone:dds18j04, 5' ... 40 0.003 2
(BJ390184) Dictyostelium discoideum cDNA clone:dds21o07, 5' ... 40 0.003 2
(EG631336) 010928AVBB009177CT (AVBB) Royal Gala young shoot ... 38 0.010 2
(CN884777) 010815AASB006570HT (AASB) Royal Gala 10 DAFB frui... 38 0.010 2
(CN864553) 000924AALA007586HT (AALA) Royal Gala 150 DAFB fru... 44 0.010 2
(EH757275) CNSL2093.b1_J19.ab1 CNS(LMS) yellow starthistle C... 54 0.011 1
(GD042899) CCHZ22547.b1 CCHZ Panicum virgatum abiotic and bi... 54 0.011 1
(GD023598) CCHZ11208.b1 CCHZ Panicum virgatum abiotic and bi... 54 0.011 1
(GD023127) CCHZ10934.b1 CCHZ Panicum virgatum abiotic and bi... 54 0.011 1
(FL920480) CCGO13009.g1 CCGO Panicum virgatum root (H) Panic... 54 0.011 1
(FL920479) CCGO13009.b1 CCGO Panicum virgatum root (H) Panic... 54 0.011 1
(FL850554) CCGI1084.b1 CCGI Panicum virgatum etiolated seedl... 54 0.011 1
(FL739054) CCGB16208.g1 CCGB Panicum virgatum apex + stem (L... 54 0.011 1
(FL739053) CCGB16208.b1 CCGB Panicum virgatum apex + stem (L... 54 0.011 1
(BJ360523) Dictyostelium discoideum cDNA clone:ddc6d13, 5' e... 40 0.026 2
(AF510714) Dictyostelium discoideum Rh-like glycoprotein gen... 48 0.032 2
(DT040596) Mdrtp1010F07.g1 Apple_EST_Mdrtp Malus x domestica... 36 0.037 2
(AM051929) Dasytricha ruminantium EST, clone Dr05_C09. 40 0.037 2
(AC084161) Caenorhabditis elegans cosmid Y92H12A, complete s... 38 0.11 7
(AC232067) Solanum tuberosum chromosome 1 clone RH088D06, **... 34 0.11 2
(FH643143) CHO_OF4975xh02r1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 0.14 2
(FH991923) CHO_OF6850xb09r1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 0.14 2
(FH675217) CHO_OF5041xb10r1.ab1 CHO_OF5 Nicotiana tabacum ge... 34 0.14 2
(FH740335) CHO_OF5150xj09r1.ab1 CHO_OF5 Nicotiana tabacum ge... 34 0.14 2
(FH226135) CHO_OF3395xm08r1.ab1 CHO_OF3 Nicotiana tabacum ge... 34 0.14 2
(FH398060) CHO_OF4811xl16r1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 0.14 2
(FH993947) CHO_OF6854xo05f1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 0.14 2
(FH211492) CHO_OF3232xk10r1.ab1 CHO_OF3 Nicotiana tabacum ge... 34 0.14 2
(FH709950) CHO_OF5000xp09f1.ab1 CHO_OF5 Nicotiana tabacum ge... 34 0.14 2
(FH525566) CHO_OF4800xd08f1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 0.14 2
(ET872944) CHO_OF244xj23r1.ab1 CHO_OF Nicotiana tabacum geno... 34 0.14 2
(FI031477) CHO_OF6945xn04f1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 0.14 2
(FH172686) CHO_OF3389xf02r1.ab1 CHO_OF3 Nicotiana tabacum ge... 34 0.14 2
(FI031548) CHO_OF6945xn04r1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 0.14 2
(FI048874) CHO_OF6509xi09r1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 0.14 2
(FH918173) CHO_ONF018xa05f1.ab1 CHO_ONF Nicotiana tabacum ge... 34 0.14 2
(ET684991) CHO_OF352xh06r1.ab1 CHO_OF Nicotiana tabacum geno... 34 0.14 2
(ET912997) CHO_OF202xh04r1.ab1 CHO_OF Nicotiana tabacum geno... 34 0.14 2
(GD016068) CCHZ6688.g1 CCHZ Panicum virgatum abiotic and bio... 50 0.18 1
(FE390062) CBTO2412.rev CBTO_Daphnia_pulex_Chosen_One_Librar... 50 0.18 1
(BC012622) Homo sapiens protein kinase, AMP-activated, alpha... 38 0.19 3
(BJ362111) Dictyostelium discoideum cDNA clone:ddc20d10, 5' ... 40 0.40 2
(AC139746) Medicago truncatula clone mth2-17b20, complete se... 38 0.40 2
(AC148177) Medicago truncatula clone mth2-4c9, complete sequ... 38 0.40 2
(BT053162) Medicago truncatula clone MTYFL_FM_FN_FO1G-I-14 u... 38 0.49 2
(FB911464) Sequence 130737 from Patent WO2008034648. 38 0.50 2
(FF571477) TTEBP50THB Tetrahymena thermophila conjugation cD... 38 0.51 2
(DW018299) EST1227260 MTY Medicago truncatula cDNA clone MTY... 38 0.51 2
(BQ164795) EST610664 KVKC Medicago truncatula cDNA clone pKV... 38 0.51 2
(BG646682) EST508301 HOGA Medicago truncatula cDNA clone pHO... 38 0.51 2
(EV261912) MTYEP29TF JCVI-MT1 Medicago truncatula cDNA 5', m... 38 0.51 2
(BG645865) EST507484 KV3 Medicago truncatula cDNA clone pKV3... 38 0.52 2
(EV257540) MTYD958TF JCVI-MT1 Medicago truncatula cDNA 5', m... 38 0.52 2
(BF647893) NF038B09EC1F1076 Elicited cell culture Medicago t... 38 0.52 2
(BF646211) NF067F06EC1F1058 Elicited cell culture Medicago t... 38 0.52 2
(BF642554) NF060G08IN1F1066 Insect herbivory Medicago trunca... 38 0.52 2
(BG453581) NF092A07LF1F1050 Developing leaf Medicago truncat... 38 0.52 2
(BF644581) NF016B08EC1F1064 Elicited cell culture Medicago t... 38 0.52 2
(CX529651) s13dNF50A04MJ022_245349 Methyl Jasmonate-Elicited... 38 0.52 2
(CX532261) s13dNF67C12MJ086_270818 Methyl Jasmonate-Elicited... 38 0.52 2
(BF597433) su97g06.y1 Gm-c1056 Glycine soja cDNA clone GENOM... 34 0.52 2
(AW685406) NF028H12NR1F1000 Nodulated root Medicago truncatu... 38 0.52 2
(BG453480) NF092C08LF1F1055 Developing leaf Medicago truncat... 38 0.52 2
(CA853099) B04C02.seq cDNA Peking library 12hr SCN3 Glycine ... 34 0.52 2
(BF631769) NF026A05DT1F1034 Drought Medicago truncatula cDNA... 38 0.52 2
(AI974331) T110180e KV0 Medicago truncatula cDNA clone pKV0-... 38 0.53 2
(EF014111) Synthetic construct flag-tagged protein kinase do... 48 0.71 1
(AY142014) Arabidopsis thaliana At4g18950/F13C5_120 mRNA, co... 48 0.71 1
(AY087826) Arabidopsis thaliana clone 38712 mRNA, complete s... 48 0.71 1
(AY058189) Arabidopsis thaliana AT4g18950/F13C5_120 mRNA, co... 48 0.71 1
(AP009641) Lotus japonicus genomic DNA, chromosome 1, clone:... 48 0.71 1
(AL161549) Arabidopsis thaliana DNA chromosome 4, contig fra... 48 0.71 1
(AL021711) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 48 0.71 1
(AK318880) Arabidopsis thaliana AT4G18950 mRNA, complete cds... 48 0.71 1
(AF165818) Guillardia theta nucleomorph chromosome 1, comple... 48 0.71 1
(AX651329) Sequence 117 from Patent WO03000898. 48 0.71 1
(AP010058) Lotus japonicus genomic DNA, clone: LjT35E05, TM0... 48 0.71 1
(AP008019) Lotus japonicus genomic DNA, chromosome 1, clone:... 48 0.71 1
(BX827900) Arabidopsis thaliana Full-length cDNA Complete se... 48 0.71 1
(BX827547) Arabidopsis thaliana Full-length cDNA Complete se... 48 0.71 1
(BX657770) Arabidopsis thaliana T-DNA flanking sequence GK-6... 48 0.71 1
(EL458324) CHTS11772.b1_G16.ab1 CHT(LMS) Jerusalem artichoke... 48 0.71 1
(EL127935) EB3RODY01CDU99 8-day Arabidopsis seedlings, aeria... 48 0.71 1
(EL118512) EB3RODY01C3TD5 8-day Arabidopsis seedlings, aeria... 48 0.71 1
(CD534609) 40D6 Arabidopsis Leaf Senescence Library Arabidop... 48 0.71 1
(CD534592) 40C6 Arabidopsis Leaf Senescence Library Arabidop... 48 0.71 1
(GE300026) OXAY-aaa42f02.g1 Oxytricha_pSMART_OXAY Sterkiella... 48 0.71 1
(AM739296) Cucumis melo subsp. melo EST, clone 15d_03-F02-M13R. 38 0.71 2
(CZ535478) SRAA-aac97e01.b1 Strongyloides ratti whole genome... 42 0.71 2
(AM484822) Vitis vinifera contig VV78X230147.5, whole genome... 44 0.83 2
(BJ430105) Dictyostelium discoideum cDNA clone:ddv6i02, 3' e... 32 1.7 3
(FG940064) UCRVU09_CCNT16677_g1 Cowpea UCR 707 Mixed Tissue ... 42 1.9 2
(FG940063) UCRVU09_CCNT16677_b1 Cowpea UCR 707 Mixed Tissue ... 42 1.9 2
(EF558371) Origanum onites mitogen activated protein kinase ... 36 1.9 2
(AY651025) Hydra vulgaris c-Jun NH2-terminal kinase mRNA, co... 34 1.9 2
(ER380239) 1094338648881 Global-Ocean-Sampling_GS-34-01-01-1... 36 1.9 2
(EX301601) 1616138_5_C08_030 PY06 Carica papaya cDNA, mRNA s... 36 1.9 2
(FH506016) CHO_OF4823xg21f1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 1.9 2
(EX297742) 1611861_5_A03_016 PY06 Carica papaya cDNA, mRNA s... 36 1.9 2
(BJ435507) Dictyostelium discoideum cDNA clone:ddv27i10, 3' ... 38 2.3 2
(CZ542489) SRAA-aad44d11.b1 Strongyloides ratti whole genome... 36 2.7 2
(CZ542662) SRAA-aad45d11.b1 Strongyloides ratti whole genome... 36 2.7 2
(AC115829) Mus musculus chromosome 5, clone RP24-93O11, comp... 46 2.8 1
(AC234117) Nomascus leucogenys leucogenys clone CH271-227A6,... 46 2.8 1
(AC230460) Bos taurus clone CH240-508C13, WORKING DRAFT SEQU... 46 2.8 1
(AC190359) Nomascus leucogenys leucogenys clone CH271-64P7, ... 46 2.8 1
(AG455937) Mus musculus molossinus DNA, clone:MSMg01-342F21.... 46 2.8 1
(DY970508) CLSM3663.b1_M04.ab1 CLS(LMS) lettuce sativa Lactu... 46 2.8 1
(CU531788) Theobroma cacao, mRNA sequence (KZ0AAK1YM13RM1). 46 2.8 1
(AJ899050) Trichoderma atroviride EST, clone L07T11P036R03443. 46 2.8 1
(BQ989845) QGF18M18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca... 46 2.8 1
(GE273484) CBWT3702.g1 CBWT Trichoderma atroviride culture i... 46 2.8 1
(GD042900) CCHZ22547.g1 CCHZ Panicum virgatum abiotic and bi... 46 2.8 1
(AW496536) kp01e12.y1 TBN95TM-SSFH Strongyloides stercoralis... 34 2.9 3
(BJ433606) Dictyostelium discoideum cDNA clone:ddv22k12, 3' ... 32 3.0 3
(AC034307) Homo sapiens chromosome 18 clone RP11-444B1 map 1... 42 3.8 6
(AC155175) Pan troglodytes BAC clone CH251-72L14 from chromo... 38 4.0 4
(AJ297966) Dictyostelium discoideum mRNA for SHK1 protein. 32 4.0 3
(BJ373288) Dictyostelium discoideum cDNA clone:ddc2f13, 3' e... 34 4.5 2
(BJ430196) Dictyostelium discoideum cDNA clone:ddv6m08, 3' e... 34 5.1 2
(AL954224) Pan troglodytes chromosome 22 BAC PTB-270D20. 38 5.3 4
(BJ432910) Dictyostelium discoideum cDNA clone:ddv20p03, 3' ... 34 5.5 2
(BJ429477) Dictyostelium discoideum cDNA clone:ddv3k13, 3' e... 34 5.6 2
(DJ386630) Diagnosis of Diseases Associated with Metastasis. 38 5.7 3
(AX348692) Sequence 150 from Patent WO0202807. 38 5.7 3
(AX345993) Sequence 1064 from Patent WO0200928. 38 5.7 3
(AX281426) Sequence 90 from Patent WO0177376. 38 5.7 3
(BJ125431) Caenorhabditis elegans cDNA clone:yk1323a04 : 5' ... 42 5.8 2
(BJ401231) Dictyostelium discoideum cDNA clone:dds22g13, 3' ... 34 5.9 2
(AU264967) Dictyostelium discoideum vegetative cDNA clone:VS... 34 6.0 2
(AU264963) Dictyostelium discoideum vegetative cDNA clone:VS... 34 6.3 2
(BJ400941) Dictyostelium discoideum cDNA clone:dds15c13, 3' ... 34 6.3 2
(AU052419) Dictyostelium discoideum slug cDNA, clone SLD285. 34 6.3 2
(AM486945) Vitis vinifera contig VV78X064807.6, whole genome... 34 6.4 3
(C83859) Dictyostelium discoideum slug cDNA, clone SSA402. 34 6.4 2
(AC073369) Homo sapiens chromosome 10 clone RP11-466H6, comp... 38 6.5 5
(BJ373418) Dictyostelium discoideum cDNA clone:ddc3c06, 3' e... 34 6.6 2
(C91258) Dictyostelium discoideum slug cDNA, clone SSJ513. 34 6.7 2
(BJ432814) Dictyostelium discoideum cDNA clone:ddv19n19, 3' ... 34 6.7 2
(BJ346767) Dictyostelium discoideum cDNA clone:dda24p20, 3' ... 34 6.7 2
(C91976) Dictyostelium discoideum slug cDNA, clone SSC643. 34 6.7 2
(BJ340861) Dictyostelium discoideum cDNA clone:dda4m06, 3' e... 34 6.7 2
(BJ346567) Dictyostelium discoideum cDNA clone:dda24h10, 3' ... 34 6.8 2
(BJ431378) Dictyostelium discoideum cDNA clone:ddv14a01, 3' ... 34 6.9 2
(AU034202) Dictyostelium discoideum slug cDNA, clone SLC252. 34 6.9 2
(BJ431323) Dictyostelium discoideum cDNA clone:ddv13b21, 3' ... 34 6.9 2
(ER313495) 1092344115947 Global-Ocean-Sampling_GS-34-01-01-1... 34 7.0 2
(DU880417) 273187 Tomato HindIII BAC Library Solanum lycoper... 34 7.0 2
(FE679085) Pv007C_M13F_H05.ab1 Phaseolus vulgaris cv Early g... 32 7.0 2
(FH529541) CHO_OF4137xb11r1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 7.0 2
(FH626523) CHO_OF4955xe10r1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 7.0 2
(FH474825) CHO_OF4753xa23r1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 7.1 2
(FH012131) CHO_OF411xo11r1.ab1 CHO_OF Nicotiana tabacum geno... 34 7.1 2
(EE612942) CHWM10089.b1_B03.ab1 CHW(LMS) silverleaf sunflowe... 34 7.1 2
(FI054299) CHO_OF6518xh13f1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 7.1 2
(FH012042) CHO_OF411xm09f2.ab1 CHO_OF Nicotiana tabacum geno... 34 7.1 2
(ET730077) CHO_OF151xk16r2.ab1 CHO_OF Nicotiana tabacum geno... 34 7.1 2
(ET747020) CHO_OF284xm02f1.ab1 CHO_OF Nicotiana tabacum geno... 34 7.1 2
(FI010707) CHO_OF6906xm06r1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 7.1 2
(FI035715) CHO_OF6450xa10f1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 7.1 2
(ET857063) CHO_OF147xn17r1.ab1 CHO_OF Nicotiana tabacum geno... 34 7.1 2
(GO033553) LJNAK11TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA ... 32 7.1 2
(AC182689) Populus trichocarpa clone Pop1-40G6, complete seq... 38 7.1 5
(EB424785) KF8C.101I02F.051214T7 KF8 Nicotiana tabacum cDNA ... 34 7.1 2
(BJ359886) Dictyostelium discoideum cDNA clone:ddc3i06, 5' e... 32 7.2 2
(BJ370991) Dictyostelium discoideum cDNA clone:ddc56a12, 5' ... 32 7.2 2
(BJ415348) Dictyostelium discoideum cDNA clone:ddv22d09, 5' ... 32 7.2 2
(BJ323345) Dictyostelium discoideum cDNA clone:dda10l06, 5' ... 32 7.2 2
(BJ329837) Dictyostelium discoideum cDNA clone:dda26o12, 5' ... 32 7.2 2
(AW693712) NF068C05ST1F1037 Developing stem Medicago truncat... 34 7.2 2
(AM809363) Nicotiana tabacum EST, clone nt002193069. 34 7.3 2
(C90109) Dictyostelium discoideum slug cDNA, clone SSI101. 34 7.4 2
(BJ401086) Dictyostelium discoideum cDNA clone:dds22h06, 3' ... 34 7.4 2
(BJ346766) Dictyostelium discoideum cDNA clone:dda24p19, 3' ... 34 7.7 2
(EH012734) USDA-FP_185605 Lysiphlebus testaceipes adult whol... 40 8.2 2
(AC175765) Bos taurus clone CH240-381L10, WORKING DRAFT SEQU... 36 8.5 6
(ER303999) 1092343728668 Global-Ocean-Sampling_GS-34-01-01-1... 40 9.1 2
(BX927382) Zebrafish DNA sequence from clone DKEY-168I13 in ... 38 9.5 4
>(C23756) Dictyostelium discoideum gamete cDNA, clone FC-AF06.
Length = 589
Score = 850 bits (429), Expect(2) = 0.0
Identities = 429/429 (100%)
Strand = Plus / Plus
Query: 459 caattgttattcatagagatttaaagagtcataatcttttagttgatgaacattatagag 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caattgttattcatagagatttaaagagtcataatcttttagttgatgaacattatagag 60
Query: 519 ttaaaatttcagattttggtctttcaactagatttaagaaacatttagataaaaagactg 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaaaatttcagattttggtctttcaactagatttaagaaacatttagataaaaagactg 120
Query: 579 caatgacacctgttggtacaccttgttggactgcaccagaagttttaagaaatgacccat 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatgacacctgttggtacaccttgttggactgcaccagaagttttaagaaatgacccat 180
Query: 639 atactgagaaagctgatgttttctcatttgcaattgttttatgggaaattgtaacaagag 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atactgagaaagctgatgttttctcatttgcaattgttttatgggaaattgtaacaagag 240
Query: 699 aagatccatatcaaggtatgccaactttccaaattgtaatttctgttggtcaacataaat 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagatccatatcaaggtatgccaactttccaaattgtaatttctgttggtcaacataaat 300
Query: 759 taagaccaatcgtaccaccacaagtatcgctccattcacacgtcttatcactgaatgttg 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagaccaatcgtaccaccacaagtatcgctccattcacacgtcttatcactgaatgttg 360
Query: 819 gtctgaagatccacaacaaagaccttcattccaagaaatcgttaaaagattggaagcaat 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtctgaagatccacaacaaagaccttcattccaagaaatcgttaaaagattggaagcaat 420
Query: 879 gtagactac 887
|||||||||
Sbjct: 421 gtagactac 429
Score = 182 bits (92), Expect(2) = 0.0
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 939 tttacaaatcacaaaccataaaccaaattaatacactacctttataaatttttaaaaaaa 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttacaaatcacaaaccataaaccaaattaatacactacctttataaatttttaaaaaaa 540
Query: 999 tggtttcatggcgacttccaaacatttaaaac 1030
||||||||||||||||||||||||||||||||
Sbjct: 541 tggtttcatggcgacttccaaacatttaaaac 572
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 1,272,388,492
Number of extensions: 78259046
Number of successful extensions: 6790889
Number of sequences better than 10.0: 191
Length of query: 1047
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 1023
Effective length of database: 102,084,959,077
Effective search space: 104432913135771
Effective search space used: 104432913135771
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home