Dictyostelium discoideum cDNA Clone FC-AE20

Size:		696
3' sequence:	AK
5' sequence:	AK
Whole insert?:	Y
Accession #:	-
Remarks:	*

Sequence FC-AE20

AATGTCTGCC AAAGCTGCCA CCAAAAACGC TACTAAGGTT GCCGTCAAAG
CACCAGAAGC AACTACACCA GTTGAAACCA AAAAATCAAA GAAAGACAAT
GTCATGAGAG GTCTCAGAAT TGAAAAGTTA GTTCTCAACA TTTGTGTTGG
TGAATCTGGT GATAGATTAG TTCGTGCTGC TAAAGTACTT GAACAATTAA
CTGGTCAAAC CCCAGTCTAC TCTAAAGCTC GTTACACTGT CAGATCTTTC
AACATTCGTC GTAATGAACA AATCGCTGCT CACGTCACTG TCCGTGGTGA
AAAAGCTGCT GAAATCTTAG AAAAAGGTCT CAAAGTTAGA GAATTCGAAC
TCCGTGCCCG TAACTTCTCA ACCCAAGGTT CATTTGGTTT TGGTATCCAA
GAACACATCG ATTTAGGTAT TAAATACGAT CCATCAATCG GTATTTACGG
TATGGATTTC TTCGTCGTAC TTTCACGTCC AGGTTTCCGT GTTGCTCACA
AAAAGAGAGC CGGTGCTAAA GTTGGTTTCC AACATAAAAT CGGTAAAGAA
GATGCCGTTA ACTGGTTCAA AACCACTTAT GATGGTATTG TTATTGGTGG
AAAGAAATAA ACAATTGTTC ACACATAAAT TATAAAAACT ATATTCATAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA A

Translated Amino Acid Sequence FC-AE20

MSAKAATKNATKVAVKAPEATTPVETKKSKKDNVMRGLRIEKLVLNICVGESGDRLVRAA
KVLEQLTGQTPVYSKARYTVRSFNIRRNEQIAAHVTVRGEKAAEILEKGLKVREFELRAR
NFSTQGSFGFGIQEHIDLGIKYDPSIGIYGMDFFVVLSRPGFRVAHKKRAGAKVGFQHKI
GKEDAVNWFKTTYDGIVIGGKK*tivht*iiktifikkkkkkkkkkkkkkkkkkkk

Homology FC-AE20 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AE20 (FC-AE20Q) /CSM/FC/FC-AE/FC-AE20Q.Seq.d/                     1285   0.0
FC-AG19 (FC-AG19Q) /CSM/FC/FC-AG/FC-AG19Q.Seq.d/                     1273   0.0
FC-AR12 (FC-AR12Q) /CSM/FC/FC-AR/FC-AR12Q.Seq.d/                     1269   0.0
VHC468 (VHC468Q) /CSM/VH/VHC4-C/VHC468Q.Seq.d/                       1241   0.0
FC-BL21 (FC-BL21Q) /CSM/FC/FC-BL/FC-BL21Q.Seq.d/                     1203   0.0
VHH863 (VHH863Q) /CSM/VH/VHH8-C/VHH863Q.Seq.d/                       1193   0.0
VFF502 (VFF502Q) /CSM/VF/VFF5-A/VFF502Q.Seq.d/                       1178   0.0
VFA578 (VFA578Q) /CSM/VF/VFA5-D/VFA578Q.Seq.d/                        977   0.0
VSG602 (VSG602Q) /CSM/VS/VSG6-A/VSG602Q.Seq.d/                        601   e-171
FC-IC1530 (FC-IC1530Q) /CSM/FC-IC/FC-IC1530Q.Seq.d/                   543   e-153

Homology FC-AE20 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


X15382|X15382.1 D.discoideum vegetative specific gene V18 ge...   444   e-176  2
AX073244|AX073244.1 Sequence 355 from Patent WO0102550.            78   7e-37  4
AL423295|AL423295.1 T7 end of clone AZ0AA007E12 of library A...    86   9e-33  4
AL423296|AL423296.1 T3 end of clone AZ0AA007E12 of library A...    86   1e-32  4
BI512306|BI512306.1 BB160008B20A06.5 Bee Brain Normalized Li...    66   1e-26  4
BI505034|BI505034.1 BB170010B20C07.5 Bee Brain Normalized/Su...    66   2e-26  4
BI745153|BI745153.1 rk96g12.y1 Meloidogyne javanica egg pAMP...    82   3e-25  2
BE492917|BE492917.1 WHE0566_F09_F09ZE Triticum monococcum ve...    84   1e-21  2
BE492135|BE492135.1 WHE0555_A08_A08ZE Triticum monococcum ve...    84   1e-21  2
BQ427221|BQ427221.1 CgHem 027-J-09 C. gigas Hemocytes Lambda...    46   1e-21  6

Homology FC-AE20 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P16168) RecName: Full=60S ribosomal protein L11; AltName: Full=...   365   1e-99
EZ419774_1(EZ419774|pid:none) TSA: Cimex lectularius CL-4-24-44 ...   268   1e-70
AM049026_1(AM049026|pid:none) Curculio glandium mRNA for ribosom...   268   2e-70
AB374946_1(AB374946|pid:none) Solea senegalensis RPL11 mRNA for ...   266   7e-70
BC135522_1(BC135522|pid:none) Xenopus tropicalis hypothetical pr...   266   7e-70
EU144049_1(EU144049|pid:none) Perca flavescens ribosomal protein...   266   7e-70
BC078513_1(BC078513|pid:none) Xenopus laevis MGC85310 protein, m...   265   1e-69
EF639091_1(EF639091|pid:none) Triatoma infestans clone tin-445 r...   265   2e-69
BT127135_1(BT127135|pid:none) Dendroctonus ponderosae clone DPO0...   265   2e-69
AK340094_1(AK340094|pid:none) Acyrthosiphon pisum ACYPI008302 mR...   265   2e-69

Homology FC-AE20 vs Genome