Dictyostelium discoideum cDNA Clone FC-AC12

Size:		1.5K
3' sequence:	HS960829
5' sequence:	HS961022
Whole insert?:	*
Accession #:	C22949
Remarks:	*

Sequence FC-AC12

ATGTAATATT AATAAAACGA AAATGTCGAC ACTCTATGAT GTTGTTATCG
TTGGTGGTGG TTTAGCAGGT TTAAATGCTG CCTATCAATT TAAGAAAGCT
GGTTTAAATG TAATGGTATT AGAAGCAAGA GATAGATTTG GTGGTAGAAC
AGAGTCAATT AAAGTTGAAG ATTATTGGTT TGATTTAGGC GGACAATGGA
TGGGAGGTAC ACATAAATAT TTAAAAGAAT TATGTGACGA ACTTGGAGTT
AAATCATTCC CACAATATGA TGAAGGTAAA CATGTATTAG AGATTAATGG
TAAGAAAGTT TATTATCAAG GTAATATTAG TAATTTAAAT AAGAGTTATA
ATTTAGAAGG ATTATTCGAG TCAATTAGCA AGATCGATGA ATTATCAGCC
GAATTGAATC CAGATAAACC ATATGCACAT AGTAAATCAA AGGAATATGA
TCAGTTAACA GTAGCACAAT GGGTGGAGAA GAATGTTAAA GGTAATGACG
CAAGATCCAT CATCGATTGG TTTTGTCGTG TTTGCGTTGC CGCAGAACCA
ACTGAAGTTA GTTTCTTATT TTTCTTACAT TTCATTCGTA CAGCTGGTAA
CTATGGTTTA TTAGCAGATA TTCATGGTGG AGCACAACAA GATCGTTTAA
TTGGTGG--- -------CCG TATTCATTAT TCACCATCTA TGCCACCAAG
ACGTGATGAA CTCACTCAAA GAATGCCAAT GGGTTCCGTC ATTAAAACCA
TCACCATCTA TGATGAACCA TTCTGGAGAA AAGAAGGTTA TTCAGCTGAA
GCCATCTCTG ATAAAGGTCC AATCTTTATC TGCTATGATG ACTCTTCACA
TGACGATAAG AAAACAGCTA TCGTTGGTTT CATTGCTGCT TCAGCCGCTA
AAGATTGGGC TGAAAAATCA CCAGAAGAAA GAAAGAGAGC CGTCTTAGAC
TGTTATGCTC GTTGGTGGGG TCCAAAAGCA TTATCTCCAA GAATCTTTTT
AGAGAAAAGT TGGAAAGAAG AAGAATATTC ACGTGGTTGT TATTTAGGTT
ACACTAGTCC AGGTACTCTC TACCAATGTG GTGAACATTT ACGTGCTCCA
GTTGGTAGAA TTCATTGGGC TGGTACAGAA ACTGCTTCAG TTTGGATTGG
TTATATGGAA GGTGCCTTAG AATCAGGTTT TAGAGTTTCA AAAGAAATTA
AAGATAAATT ATTAAATTCA AAATTATAAA TAAATAAATA AATAATAA

Translated Amino Acid Sequence FC-AC12

CNINKTKMSTLYDVVIVGGGLAGLNAAYQFKKAGLNVMVLEARDRFGGRTESIKVEDYWF
DLGGQWMGGTHKYLKELCDELGVKSFPQYDEGKHVLEINGKKVYYQGNISNLNKSYNLEG
LFESISKIDELSAELNPDKPYAHSKSKEYDQLTVAQWVEKNVKGNDARSIIDWFCRVCVA
AEPTEVSFLFFLHFIRTAGNYGLLADIHGGAQQDRLIG---

---RIHYSPSMPPRRDELTQRMPMGSVIKTITIYDEPFWRKEGYSAEAISDKGPIFICYD
DSSHDDKKTAIVGFIAASAAKDWAEKSPEERKRAVLDCYARWWGPKALSPRIFLEKSWKE
EEYSRGCYLGYTSPGTLYQCGEHLRAPVGRIHWAGTETASVWIGYMEGALESGFRVSKEI
KDKLLNSKL*ink*ii

Homology FC-AC12 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AC12 (FC-AC12Q) /CSM/FC/FC-AC/FC-AC12Q.Seq.d/                     2294   0.0
VFL280 (VFL280Q) /CSM/VF/VFL2-D/VFL280Q.Seq.d/                       1302   0.0
SLC349 (SLC349Q) /CSM/SL/SLC3-C/SLC349Q.Seq.d/                       1292   0.0
CFC831 (CFC831Q) /CSM/CF/CFC8-B/CFC831Q.Seq.d/                       1189   0.0
CFB191 (CFB191Q) /CSM/CF/CFB1-D/CFB191Q.Seq.d/                       1189   0.0
CFI555 (CFI555Q) /CSM/CF/CFI5-C/CFI555Q.Seq.d/                       1179   0.0
CFI459 (CFI459Q) /CSM/CF/CFI4-C/CFI459Q.Seq.d/                       1179   0.0
CFH589 (CFH589Q) /CSM/CF/CFH5-D/CFH589Q.Seq.d/                       1179   0.0
VFN480 (VFN480Q) /CSM/VF/VFN4-D/VFN480Q.Seq.d/                       1178   0.0
AFO409 (AFO409Q) /CSM/AF/AFO4-A/AFO409Q.Seq.d/                       1176   0.0

Homology FC-AC12 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C22949) Dictyostelium discoideum gamete cDNA, clone FC-AC12.    1298   0.0    1
(AU060948) Dictyostelium discoideum slug cDNA, clone SLC349.     1289   0.0    1
(BJ360501) Dictyostelium discoideum cDNA clone:ddc6n08, 5' e...  1189   0.0    1
(BJ360014) Dictyostelium discoideum cDNA clone:ddc3e23, 5' e...  1189   0.0    1
(BJ415849) Dictyostelium discoideum cDNA clone:ddv23o20, 5' ...  1187   0.0    1
(BJ361767) Dictyostelium discoideum cDNA clone:ddc18m13, 5' ...  1179   0.0    1
(BJ361529) Dictyostelium discoideum cDNA clone:ddc17f16, 5' ...  1179   0.0    1
(BJ361323) Dictyostelium discoideum cDNA clone:ddc16a23, 5' ...  1179   0.0    1
(BJ416971) Dictyostelium discoideum cDNA clone:ddv27p20, 5' ...  1178   0.0    1
(BJ328660) Dictyostelium discoideum cDNA clone:dda29b04, 5' ...  1176   0.0    1

Homology FC-AC12 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP010948_357(AP010948|pid:none) Azospirillum sp. B510 plasmid pA...   191   1e-46
AP006618_3091(AP006618|pid:none) Nocardia farcinica IFM 10152 DN...   182   3e-44
CP001854_3609(CP001854|pid:none) Conexibacter woesei DSM 14684, ...   178   5e-43
CP002988_2755(CP002988|pid:none) Halophilic archaeon DL31, compl...   173   2e-41
AY185211_1(AY185211|pid:none) Danio rerio monoamine oxidase mRNA...   169   4e-40
(Q6NSN2) RecName: Full=Amine oxidase [flavin-containing];       ...   169   4e-40
FQ859184_1118(FQ859184|pid:none) Streptomyces cattleya NRRL 8057...   168   5e-40
(Q6PLK3) RecName: Full=Amine oxidase [flavin-containing] B;     ...   167   2e-39
I51346(I51346) monoamine oxidase - rainbow trout  &L37878_1(L378...   165   4e-39
AF217955_1(AF217955|pid:none) Bos taurus monoamine oxidase B mRN...   165   6e-39

Homology FC-AC12 vs Genome