Dictyostelium discoideum cDNA Clone FC-AB04

Size:		1.0K
3' sequence:	AK
5' sequence:	AK961220
Whole insert?:	*
Accession #:	-
Remarks:	*

Sequence FC-AB04

AGTATAGATT TTTTTCATAT AAATAAATTT TTTAATAACA TAAAACAATA
ATAAAATGCA AGCAATTAAA TGTGTCGTTG TCGGTGATGG TGCTGTAGGT
AAAACCTGTC TTTTAATTTC TTACACCACC AATGCATTCC CAGGTGAATA
TATCCCAACA GTTTTCGATA ACTACAGCGC TAATGTAATG GTTGATGGTA
AACCAATCAA TCTCGGCTTA TGGGATACTG CTGGTCAAGA AGATTATGAT
CGTTTACGTC CACTCTCATA TCCACAAACT GATGTTTTCT TAATTTGTTT
CTCTATCATT TCACCATCAT CATTTGAAAA TGTTAATGGT AAATGGCATC
CAGAAATTTG TCATCATGCA CCAAATGTTC CAATCATTTT AGTTGGTACT
AAATTGGATA TGCGTGAAGA TAAGGAAACT CAAGATAGAT TAAAAGAAAA
GAAACTCTAC CCAATTTCAT ACGAACAAGG TTTAGCTAAA ATGAAAGAAA
TCAACGCTGT TAAATATCTT GAATGTTCAG CTCTTACCCA AAAAGGTCTC
AAGACTGTTT TTGATGAAGC CATTAGAGCC GTTATCAACC CACCACTCAG
CAAAAAGAAG AAAAGTTCAG GTGGTTGCAA CATTTTATAA ACAAATTGTA
TTTCATCAAC ---------- AATAATCCAA CCAAATTTTT AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAA

Translated Amino Acid Sequence FC-AB04

yrffsyk*if**hktiikckqlnvslsvmvl*vkpvf*fltppmhsqvnisqqfsittal
m*wlmvnqsisaygillvkkimivyvhshihklmfs*fvslsfhhhhlkmlmvngiqkfv
imhqmfqsf*lvlnwicvkirklkid*kkrnstqfhtnkv*lk*KKSTLLNILNVQLLPK
KVSRLFLMKPLEPLSTHHSAKRRKVQVVATFYKQIVFHQ---

---NNPTKFLKKKKKKKKKKKKKK

Homology FC-AB04 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AB04 (FC-AB04Q) /CSM/FC/FC-AB/FC-AB04Q.Seq.d/                     1168   0.0
VSI186 (VSI186Q) /CSM/VS/VSI1-D/VSI186Q.Seq.d/                       1154   0.0
SLB519 (SLB519Q) /CSM/SL/SLB5-A/SLB519Q.Seq.d/                       1154   0.0
VSI334 (VSI334Q) /CSM/VS/VSI3-B/VSI334Q.Seq.d/                       1108   0.0
SLB482 (SLB482Q) /CSM/SL/SLB4-D/SLB482Q.Seq.d/                        985   0.0
SSG480 (SSG480Q) /CSM/SS/SSG4-D/SSG480Q.Seq.d/                        926   0.0
VSG753 (VSG753Q) /CSM/VS/VSG7-C/VSG753Q.Seq.d/                        918   0.0
SSE292 (SSE292Q) /CSM/SS/SSE2-D/SSE292Q.Seq.d/                        771   0.0
VSE758 (VSE758Q) /CSM/VS/VSE7-C/VSE758Q.Seq.d/                        733   0.0
VSH418 (VSH418Q) /CSM/VS/VSH4-A/VSH418Q.Seq.d/                        731   0.0

Homology FC-AB04 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU284231) Dictyostelium discoideum gamete cDNA clone:FC-AB0...  1168   0.0    1
(AU060794) Dictyostelium discoideum slug cDNA, clone SLB519.     1166   0.0    1
(L11588) Dictyostelium discoideum rac1A protein mRNA, comple...  1152   0.0    1
(AF309947) Dictyostelium discoideum Rac1A (rac1A) gene, comp...   658   0.0    2
(AU268527) Dictyostelium discoideum vegetative cDNA clone:VS...   999   0.0    1
(AU033822) Dictyostelium discoideum slug cDNA, clone SLB482.      985   0.0    1
(C94161) Dictyostelium discoideum slug cDNA, clone SSG480.        926   0.0    1
(AU266784) Dictyostelium discoideum vegetative cDNA clone:VS...   892   0.0    2
(AU268289) Dictyostelium discoideum vegetative cDNA clone:VS...   880   0.0    1
(AU263353) Dictyostelium discoideum vegetative cDNA clone:VS...   733   0.0    1

Homology FC-AB04 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P34144) RecName: Full=Rho-related protein rac1A; Flags: Precurs...   384   e-105
L11588_1(L11588|pid:none) Dictyostelium discoideum rac1A protein...   383   e-105
CS026775_1(CS026775|pid:none) Sequence 327 from Patent WO2005014...   364   3e-99
(P34146) RecName: Full=Rho-related protein rac1C; Flags: Precurs...   359   9e-98
AB510955_1(AB510955|pid:none) Ephydatia fluviatilis EfRac1 mRNA ...   329   8e-89
AY892146_1(AY892146|pid:none) Synthetic construct Homo sapiens c...   326   6e-88
AY889694_1(AY889694|pid:none) Synthetic construct Homo sapiens c...   326   6e-88
AF174644_1(AF174644|pid:none) Xenopus laevis rac GTPase mRNA, co...   326   8e-88
(P62998) RecName: Full=Ras-related C3 botulinum toxin substrate ...   326   8e-88
BT045529_1(BT045529|pid:none) Salmo salar clone ssal-rgf-524-088...   326   8e-88

Homology FC-AB04 vs Genome