<List of Series> <Series: FC-AA> <Clone: FC-AA21> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Clone FC-AA21

Dictyostelium discoideum cDNA Project Home
Size:		839
3' sequence:	HS960829
5' sequence:	HS960914
Whole insert?:	Y
Accession #:	C23640
Remarks:	*

Sequence FC-AA21

AATTATTTTC ATTAATTTTA GCTTTATTCC TTGTCAACTC CGCTGTTGTC
TCTTCACTCG ACTCATGTAG TATTTGTGTT GATTTTGTTG GTAACTCACT
CAATGATCTT TTAAATATTA TCCTTAACTC TGGTGTTATT GGTACCTGTG
GTGATCTTTG CTCAGCTGTT CCAGGTGGTC AAATTGTTGA TACCGTTTGC
GACTTATTAT GCGATTATGT TGGCGTTGAT GAATTTATTA AACTCATTTC
AGATGTTGAC CCAGATCCAA TTTACATTTG TGAAAAGATC AGTGTTTGCA
AAACCAACGA TAACGCAGCT GCTTCATTAG ATTTAGTTCA AATTAACCCA
CAAAACGGTA CTGTCGGTGG AACATTCACC CTCTCAATTG CTTACACTGT
TACCAACACC ATCGCCACTG GTCAATTAGC TTTCAATATC ATCGATCCAA
CCGGTAATGC TTTTGGTGAT GCCGTTTTAT TAGTTCAACA ATCACCAGAA
CAATACACCC AACAATTCCA ATTCCAAGCT ACCCCATCAG AACAAGAATC
ATTCCCAAAT GGTTTATACA CTGTCCAAGC TCTCGTTTGT GAAGGTTCAT
GTGGTTCACC ACATCCAAAC ACTTACACTC TTGCCAACGG TACCACCACT
TTCACCATCT CTGGTGCTGA TTCTTCATCA ATGTCTGGTG CTGGTTCTTT
CTCTGGTTCT TCCCAATCAA CCCAAACTGG TGCCGCCTCT GGTTCAGGTT
CAGGTTTTGC TTTATTTTAA AAAAATACTT ATTAAAATAA ATATTTAATT
TTATAATTTT TTATTTAATT CTATAAAAAA AAAAAAAAA

Translated Amino Acid Sequence FC-AA21

<All Frames> 
LFSLILALFLVNSAVVSSLDSCSICVDFVGNSLNDLLNIILNSGVIGTCGDLCSAVPGGQ
IVDTVCDLLCDYVGVDEFIKLISDVDPDPIYICEKISVCKTNDNAAASLDLVQINPQNGT
VGGTFTLSIAYTVTNTIATGQLAFNIIDPTGNAFGDAVLLVQQSPEQYTQQFQFQATPSE
QESFPNGLYTVQALVCEGSCGSPHPNTYTLANGTTTFTISGADSSSMSGAGSFSGSSQST
QTGAASGSGSGFALF*knty*nkylil*ffi*fykkkkk


Homology FC-AA21 vs CSM-cDNA

<more CSM info> 
Sequences producing significant alignments:                      (bits) Value


FC-AA21 (FC-AA21Q) /CSM/FC/FC-AA/FC-AA21Q.Seq.d/                     1522   0.0
FC-020 (FC-020Q) /CSM/CG/CG-FC/FC-020Q.Seq.d/                        1522   0.0
VSI490 (VSI490Q) /CSM/VS/VSI4-D/VSI490Q.Seq.d/                       1509   0.0
VSF151 (VSF151Q) /CSM/VS/VSF1-C/VSF151Q.Seq.d/                       1509   0.0
SLE884 (SLE884Q) /CSM/SL/SLE8-D/SLE884Q.Seq.d/                       1497   0.0
VSJ484 (VSJ484Q) /CSM/VS/VSJ4-D/VSJ484Q.Seq.d/                       1493   0.0
VSF843 (VSF843Q) /CSM/VS/VSF8-B/VSF843Q.Seq.d/                       1481   0.0
SSD491 (SSD491Q) /CSM/SS/SSD4-D/SSD491Q.Seq.d/                       1451   0.0
VSC485 (VSC485Q) /CSM/VS/VSC4-D/VSC485Q.Seq.d/                       1209   0.0
FC-BO02 (FC-BO02Q) /CSM/FC/FC-BO/FC-BO02Q.Seq.d/                     1142   0.0


Homology FC-AA21 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


AF140780|AF140780.1 Dictyostelium discoideum countin gene, c...  1273   0.0    1
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...  1273   0.0    1
AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 ma...    54   2e-06  8
AE000788|AE000788.1 Borrelia burgdorferi B31 plasmid lp36, c...    36   0.083  6
AJ251114|AJ251114.1 Mucor circinelloides f. lusitanicus odc ...    42   0.36   2
AR300198|AR300198.1 Sequence 1 from patent US 6537773.             34   0.69   13
AL645770|AL645770.7 Human DNA sequence *** SEQUENCING CANCEL...    46   0.76   1
AL627310|AL627310.5 Human DNA sequence from clone RP11-199P2...    46   0.76   1
AC005699|AC005699.9 Homo sapiens chromosome 4 clone C0473M13...    36   0.91   7
AC006919|AC006919.6 Arabidopsis thaliana chromosome 2 clone ...    42   1.2    5


Homology FC-AA21 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q86IV5) RecName: Full=Countin-1; Flags: Precursor;  &AC116986_1...   413   e-114
AF140780_1(AF140780|pid:none) Dictyostelium discoideum countin g...   409   e-112
(Q86HV8) RecName: Full=Countin-3; Flags: Precursor;  &AB211530_1...   208   3e-52
(Q8WSR7) RecName: Full=Countin-2; Flags: Precursor;  &AB067573_1...   176   2e-42
(Q554K2) RecName: Full=Countin-like protein; Flags: Precursor;        108   3e-22
AC116956_1(AC116956|pid:none) Dictyostelium discoideum chromosom...   108   3e-22
CP000682_1469(CP000682|pid:none) Metallosphaera sedula DSM 5348,...    38   0.57
AF082528_1(AF082528|pid:none) Entamoeba dispar strain SAW 142 po...    38   0.75
(Q24824) RecName: Full=Pore-forming peptide ameobapore B; AltNam...    37   1.3
CP000269_2685(CP000269|pid:none) Janthinobacterium sp. Marseille...    37   1.7


Homology FC-AA21 vs Genome

<more Genome info> 





<List of Series> <Series: FC-AA> <Clone: FC-AA21> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>





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