Dictyostelium discoideum cDNA Clone FC-AA13

Size:		1.0K
3' sequence:	HS960829
5' sequence:	-
Whole insert?:	-
Accession #:	-
Remarks:	*

Sequence FC-AA13

---------- AAAGCAAACT CGTGCTGGTC AACGTACCCG TTTCAAGGCT
TTCGTCGTTG TTGGTGATCA CAACGGTCAT GTAGGTCTCG GTGTTAAATG
CGCTAAGGAA GTTGCCACCG CCATTTCTGG TGCTATCGTT GCTGCCAAAT
TATCAGTCAT CCCAGTTCGT CGTGGTTATT GGGGTAACAA ACTCGGTGCT
CCACACACTG TCCCAACCAA AGTCACTGGT AAATGCGGTT CCGTCGCTGT
ACGTCTCGTT CCAGCCCCAA GAGGTACTGG TATCGTTGCT GCTCGTGTTC
CAAAGAAATT ACTCCAATAT GCTGGTGTTG ATGATGTTTA CACATCTTCA
CGTGGTAAGA CCAGAACCAT GGGTAACTTT GTCATGGCCA CTTTCTTCGC
CATCACCAAG ACCTTTGCTT ACTTAACCCC AGATCTTTGG AGAGAAGTCA
AATTAATCAA GACTCCATAC CAAGAACACT CTGCCAAATT ATCCGAAAAA
CAACAATAAA TCAATTTTAA TTAATTTTTT ACTGTTTT

Translated Amino Acid Sequence FC-AA13

---KQTRAGQRTRFKAFVVVGDHNGHVGLGVKCAKEVATAISGAIVAAKLSVIPVRRGYW
GNKLGAPHTVPTKVTGKCGSVAVRLVPAPRGTGIVAARVPKKLLQYAGVDDVYTSSRGKT
RTMGNFVMATFFAITKTFAYLTPDLWREVKLIKTPYQEHSAKLSEKQQ*infn*fftv

Homology FC-AA13 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLE490 (SLE490Q) /CSM/SL/SLE4-D/SLE490Q.Seq.d/                       1047   0.0
SLC152 (SLC152Q) /CSM/SL/SLC1-C/SLC152Q.Seq.d/                       1047   0.0
FC-BA12 (FC-BA12Q) /CSM/FC/FC-BA/FC-BA12Q.Seq.d/                     1047   0.0
FC-AC19 (FC-AC19Q) /CSM/FC/FC-AC/FC-AC19Q.Seq.d/                     1047   0.0
FC-AA13 (FC-AA13Q) /CSM/FC/FC-AA/FC-AA13Q.Seq.d/                     1047   0.0
VHC440 (VHC440Q) /CSM/VH/VHC4-B/VHC440Q.Seq.d/                       1035   0.0
VFE388 (VFE388Q) /CSM/VF/VFE3-D/VFE388Q.Seq.d/                       1015   0.0
VHC570 (VHC570Q) /CSM/VH/VHC5-C/VHC570Q.Seq.d/                       1007   0.0
VHN687 (VHN687Q) /CSM/VH/VHN6-D/VHN687Q.Seq.d/                       1005   0.0
AFO729 (AFO729Q) /CSM/AF/AFO7-B/AFO729Q.Seq.d/                        997   0.0

Homology FC-AA13 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU284508) Dictyostelium discoideum gamete cDNA clone:FC-BA1...  1047   0.0    1
(AU284245) Dictyostelium discoideum gamete cDNA clone:FC-AC1...  1047   0.0    1
(AU284221) Dictyostelium discoideum gamete cDNA clone:FC-AA1...  1047   0.0    1
(AU035013) Dictyostelium discoideum slug cDNA, clone SLE490.     1047   0.0    1
(AU034454) Dictyostelium discoideum slug cDNA, clone SLC152.     1047   0.0    1
(BJ437816) Dictyostelium discoideum cDNA clone:ddv35p10, 3' ...  1035   0.0    1
(BJ431130) Dictyostelium discoideum cDNA clone:ddv9p21, 3' e...  1013   0.0    1
(BJ445252) Dictyostelium discoideum cDNA clone:ddv58m22, 3' ...  1005   0.0    1
(BJ438188) Dictyostelium discoideum cDNA clone:ddv36k17, 3' ...  1005   0.0    1
(BJ346254) Dictyostelium discoideum cDNA clone:dda30j07, 3' ...   997   0.0    1

Homology FC-AA13 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P27685) RecName: Full=40S ribosomal protein S2; AltName: Full=P...   332   6e-90
JN048932_1(JN048932|pid:none) Dictyostelium lacteum clone DL0215...   294   1e-78
JN048898_1(JN048898|pid:none) Acytostelium subglobosum clone ADB...   288   1e-76
AC135958_8(AC135958|pid:none) Oryza sativa chromosome 3 BAC OSJN...   265   1e-69
AY088743_1(AY088743|pid:none) Arabidopsis thaliana clone 93867 m...   264   2e-69
AB008017_1(AB008017|pid:none) Arabidopsis thaliana RF12 mRNA, pa...   264   2e-69
(Q93VB8) RecName: Full=40S ribosomal protein S2-2;  &AB076984_1(...   264   2e-69
JN389445_2(JN389445|pid:none) Arabidopsis thaliana At1g58370 (At...   264   2e-69
(Q8L8Y0) RecName: Full=40S ribosomal protein S2-1;  &AB008016_1(...   264   2e-69
AY085726_1(AY085726|pid:none) Arabidopsis thaliana clone 17415 m...   263   3e-69

Homology FC-AA13 vs Genome