Dictyostelium discoideum cDNA Clone FC-AA11

Size:		1.6K
3' sequence:	HS960829
5' sequence:	HS960909
Whole insert?:	*
Accession #:	C22941
Remarks:	*

Sequence FC-AA11

GGTGAATTAA TTGTTGAACC AGTTGATCAA AAATATATTT TCAAGACTGA
ACGTAAAGTT CCAAGAATGG GTGTTATGAT TGTTGGTTTA TGTGGTAACA
ATGGTACAAC AGTAGTTGGT GGTGTTATTG CCAATCGTGA AGGTTTATGT
TGGAATACCA AACAAGGTCT TCAAACACCA AACTATTTTG GTTCAGTTGT
TATGTCCTCA ACCATTAGAA TGGGTATGGA TGAAAATGGT TGTGATGCCT
ACATTCCATT AAAGAACTTA ATCCCAATGG TTCATCCAAA CGATATTGTT
TTCGGTGGTT GGGATATCAA CAATGCCAAC TTAGCTGATG CCATGCAACG
TGCTCAAGTT TTTGACTATG ATTTACAAGT TCAATTGATT CCACACATGA
AAAACATCAC TCCACTCCCA TCCATCTATT TCCCAGACTT TATCGCTGCA
AATCAAAAGG ATCGTGCCAA CAATGTTTTA ACTGGTACCA AAAAGGAACA
AATGGAACAA ATTAGAAAAG ATATTAGAGA TTTCAAAGAA TCAAACAAAC
TCGACACCGT CGTCGTTATG TGGTCCGCAA ACACTGAACG TTTCTCTTCA
CTCGTTCCAG GTGTCAATGA TACCATCGAA A--------- -GTGAACACC
CAGATCACGT TATTGTCATC AAATACGTCC CATACGTAGG TGATTCAAAG
AGAGCTATGG ATGAATATAC CTCACAAATC TTTATGGGTG GTCACAATAC
AATCGTTCTC CACAACACTT GTGAAGATTC TTTATTAGCC GCTCCAATTA
TTTTAGATTT AGTTATTCTT GCTGAAGTTA CTAGTCGTAT CACAATGAAA
AAACAAGATG ATGATCAATT TGCTACTTTC CATCCAGTTT TATCATTATT
ATCATACCTC CTTAAAGCAC CAATTGTTCC AAAACATGCT ACCGTTGTAA
ATGCACTCTT CAAACAAAGA GCCTGCATAG AAAATATCTT CAAAGCATGC
GTTGGTATCG CTCCAGATAA TAACATGTTA TTAGAACAAA GATTATAAAT
AATACAAACA ATTTCAATAA TAATAACATT TATTTAAAAA ATAACTTCCA
TTTATAATAA AATAATCTTT TGTAAAATTT AATAACTCTA AAA

Translated Amino Acid Sequence FC-AA11

GELIVEPVDQKYIFKTERKVPRMGVMIVGLCGNNGTTVVGGVIANREGLCWNTKQGLQTP
NYFGSVVMSSTIRMGMDENGCDAYIPLKNLIPMVHPNDIVFGGWDINNANLADAMQRAQV
FDYDLQVQLIPHMKNITPLPSIYFPDFIAANQKDRANNVLTGTKKEQMEQIRKDIRDFKE
SNKLDTVVVMWSANTERFSSLVPGVNDTIE---

---EHPDHVIVIKYVPYVGDSKRAMDEYTSQIFMGGHNTIVLHNTCEDSLLAAPIILDLV
ILAEVTSRITMKKQDDDQFATFHPVLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFK
ACVGIAPDNNMLLEQRL*iiqtisiiitfi*kitsiynkiifcki**l*

Homology FC-AA11 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AA11 (FC-AA11Q) /CSM/FC/FC-AA/FC-AA11Q.Seq.d/                     2206   0.0
FC-010 (FC-010Q) /CSM/CG/CG-FC/FC-010Q.Seq.d/                        1251   0.0
VFG706 (VFG706Q) /CSM/VF/VFG7-A/VFG706Q.Seq.d/                       1181   0.0
SLB678 (SLB678Q) /CSM/SL/SLB6-D/SLB678Q.Seq.d/                       1061   0.0
SLD414 (SLD414Q) /CSM/SL/SLD4-A/SLD414Q.Seq.d/                        995   0.0
SLB787 (SLB787Q) /CSM/SL/SLB7-D/SLB787Q.Seq.d/                        995   0.0
SLI647 (SLI647Q) /CSM/SL/SLI6-B/SLI647Q.Seq.d/                        993   0.0
FC-IC0800 (FC-IC0800Q) /CSM/FC-IC/FC-IC0800Q.Seq.d/                   993   0.0
FC-AN23 (FC-AN23Q) /CSM/FC/FC-AN/FC-AN23Q.Seq.d/                      991   0.0
SLD258 (SLD258Q) /CSM/SL/SLD2-C/SLD258Q.Seq.d/                        987   0.0

Homology FC-AA11 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C22941) Dictyostelium discoideum gamete cDNA, clone FC-AA11.    1251   0.0    1
(AU060170) Dictyostelium discoideum slug cDNA, clone SLA510.     1221   0.0    1
(BJ413090) Dictyostelium discoideum cDNA clone:ddv14l01, 5' ...  1181   0.0    1
(AU060845) Dictyostelium discoideum slug cDNA, clone SLB678.     1061   0.0    1
(BJ390160) Dictyostelium discoideum cDNA clone:dds21i09, 5' ...   987   0.0    1
(BJ415724) Dictyostelium discoideum cDNA clone:ddv23c15, 5' ...   985   0.0    1
(BJ412716) Dictyostelium discoideum cDNA clone:ddv9h18, 5' e...   977   0.0    1
(BJ324589) Dictyostelium discoideum cDNA clone:dda7d05, 5' e...   971   0.0    1
(BJ415934) Dictyostelium discoideum cDNA clone:ddv24a08, 5' ...   948   0.0    1
(BJ416012) Dictyostelium discoideum cDNA clone:ddv24d14, 5' ...   944   0.0    1

Homology FC-AA11 vs Protein

Sequences producing significant alignments:                      (bits) Value


FR824046_202(FR824046|pid:none) Albugo laibachii Nc14, genomic c...   260   1e-67
(P42802) RecName: Full=Inositol-3-phosphate synthase;          S...   250   1e-64
FJ415168_1(FJ415168|pid:none) Gossypium hirsutum clone Spot14 My...   249   3e-64
DQ323907_1(DQ323907|pid:none) Glycine max myo-inositol-1-phospha...   248   6e-64
FM998582_1(FM998582|pid:none) Arabidopsis thaliana At4g39800 gen...   247   1e-63
FM998556_1(FM998556|pid:none) Arabidopsis thaliana At4g39800 gen...   246   1e-63
(Q9SSV4) RecName: Full=Inositol-3-phosphate synthase;          S...   246   1e-63
FQ857391_18(FQ857391|pid:none) Piriformospora indica PIRI_contig...   246   2e-63
(Q9FYV1) RecName: Full=Inositol-3-phosphate synthase;          S...   246   2e-63
(Q9LW96) RecName: Full=Inositol-3-phosphate synthase;          S...   246   2e-63

Homology FC-AA11 vs Genome