Homology FC-IC1620 vs Protein
Query= FC-IC1620 (FC-IC1620Q) /CSM/FC-IC/FC-IC1620Q.Seq.d/
(1617 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717 pro... 58 2e-06
AK292863_1(AK292863|pid:none) Homo sapiens cDNA FLJ76193 complet... 58 2e-06
BC148035_1(BC148035|pid:none) Bos taurus Rho-related BTB domain ... 57 4e-06
CR859023_1(CR859023|pid:none) Pongo abelii mRNA; cDNA DKFZp469P2... 56 7e-06
BC026836_1(BC026836|pid:none) Mus musculus Rho-related BTB domai... 55 9e-06
AK122354_1(AK122354|pid:none) Mus musculus mRNA for mKIAA0717 pr... 55 1e-05
AF420001_1(AF420001|pid:none) Mus musculus DBC2 protein (Dbc2) m... 55 1e-05
AK171295_1(AK171295|pid:none) Mus musculus NOD-derived CD11c +ve... 55 1e-05
(O94844) RecName: Full=Rho-related BTB domain-containing protein... 55 2e-05
BC144800_1(BC144800|pid:none) Mus musculus Rho-related BTB domai... 54 2e-05
CR858863_1(CR858863|pid:none) Pongo abelii mRNA; cDNA DKFZp469P1... 54 2e-05
(Q9DAK3) RecName: Full=Rho-related BTB domain-containing protein... 54 2e-05
AK173015_1(AK173015|pid:none) Mus musculus premature mRNA for mK... 54 2e-05
AK005770_1(AK005770|pid:none) Mus musculus adult male testis cDN... 54 2e-05
JI861809_1(JI861809|pid:none) TSA: Capra hircus 8214.1.Cahikidne... 51 2e-04
FQ310506_541(FQ310506|pid:none) Dicentrarchus labrax chromosome ... 51 2e-04
AC117082_9(AC117082|pid:none) Dictyostelium discoideum chromosom... 49 0.001
HB815236_1(HB815236|pid:none) Sequence 164450 from Patent EP2090... 47 0.002
BX649610_1(BX649610|pid:none) Zebrafish DNA sequence from clone ... 45 0.009
(P0C7A6) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 45 0.009
AE014296_3770(AE014296|pid:none) Drosophila melanogaster chromos... 44 0.021
AF221547_1(AF221547|pid:none) Drosophila melanogaster RhoGTPase ... 44 0.021
AF033623_1(AF033623|pid:none) Ovis aries putative heparan sulfat... 44 0.027
BX784028_1(BX784028|pid:none) Zebrafish DNA sequence from clone ... 44 0.035
(Q9ZVC2) RecName: Full=Regulatory protein NPR5; AltName: Full=BT... 43 0.046
(Q1LVW0) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 43 0.046
BX649350_1(BX649350|pid:none) Zebrafish DNA sequence from clone ... 43 0.046
AL928936_1(AL928936|pid:none) Zebrafish DNA sequence from clone ... 43 0.046
BT002986_1(BT002986|pid:none) Arabidopsis thaliana clone RAFL15-... 43 0.046
DQ450955_1(DQ450955|pid:none) Oryza sativa (japonica cultivar-gr... 43 0.061
BC006756_1(BC006756|pid:none) Mus musculus ankyrin repeat and BT... 42 0.079
(O08764) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 42 0.079
AB173763_1(AB173763|pid:none) Macaca fascicularis brain cDNA clo... 42 0.10
BC141145_1(BC141145|pid:none) Mus musculus BTB (POZ) domain cont... 42 0.13
AK044022_1(AK044022|pid:none) Mus musculus 10 days neonate corte... 42 0.13
BC072592_1(BC072592|pid:none) Mus musculus BTB (POZ) domain cont... 42 0.13
AK039038_1(AK039038|pid:none) Mus musculus adult male hypothalam... 42 0.13
AK018115_1(AK018115|pid:none) Mus musculus adult male medulla ob... 42 0.13
AK091560_1(AK091560|pid:none) Homo sapiens cDNA FLJ34241 fis, cl... 41 0.18
(A6QL63) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 41 0.18
BT039266_1(BT039266|pid:none) Zea mays full-length cDNA clone ZM... 41 0.18
BC084274_1(BC084274|pid:none) Xenopus laevis hypothetical LOC495... 41 0.18
AK127012_1(AK127012|pid:none) Homo sapiens cDNA FLJ45068 fis, cl... 41 0.18
CR860715_1(CR860715|pid:none) Pongo abelii mRNA; cDNA DKFZp459O0... 41 0.18
AY373588_1(AY373588|pid:none) Homo sapiens ANK-repeat BTB domain... 41 0.18
(Q8N961) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 41 0.18
AK128445_1(AK128445|pid:none) Homo sapiens cDNA FLJ46588 fis, cl... 41 0.18
CP001159_136(CP001159|pid:none) Thalassiosira pseudonana CCMP133... 41 0.18
AB385392_1(AB385392|pid:none) Synthetic construct DNA, clone: pF... 41 0.23
AB020685_1(AB020685|pid:none) Homo sapiens mRNA for KIAA0878 pro... 41 0.23
BC041337_1(BC041337|pid:none) Homo sapiens Rho-related BTB domai... 41 0.23
FP671138_274(FP671138|pid:none) Mycoplasma agalactiae 5632 chrom... 40 0.39
AE001362_184(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.39
AK355716_1(AK355716|pid:none) Hordeum vulgare subsp. vulgare mRN... 40 0.51
AL606921_1(AL606921|pid:none) Mouse DNA sequence from clone RP23... 39 0.87
(Q8CII0) RecName: Full=Zinc finger and BTB domain-containing pro... 39 0.87
AK132152_1(AK132152|pid:none) Mus musculus 14, 17 days embryo he... 39 0.87
AK228073_1(AK228073|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.87
CP002686_6025(CP002686|pid:none) Arabidopsis thaliana chromosome... 39 1.1
AK367450_1(AK367450|pid:none) Hordeum vulgare subsp. vulgare mRN... 39 1.1
(Q9CTN4) RecName: Full=Rho-related BTB domain-containing protein... 39 1.1
AK129234_1(AK129234|pid:none) Mus musculus mRNA for mKIAA0878 pr... 39 1.1
BC059036_1(BC059036|pid:none) Mus musculus BTB (POZ) domain cont... 39 1.1
AJ720925_1(AJ720925|pid:none) Gallus gallus mRNA for hypothetica... 39 1.1
BC101561_1(BC101561|pid:none) Homo sapiens BTB (POZ) domain cont... 38 1.5
(Q8NAP8) RecName: Full=Zinc finger and BTB domain-containing pro... 38 1.5
AK317640_1(AK317640|pid:none) Arabidopsis thaliana AT5G19330 mRN... 38 1.5
AK357951_1(AK357951|pid:none) Hordeum vulgare subsp. vulgare mRN... 38 1.9
AK360591_1(AK360591|pid:none) Hordeum vulgare subsp. vulgare mRN... 38 1.9
AP003633_29(AP003633|pid:none) Oryza sativa Japonica Group genom... 38 1.9
JN180856_1(JN180856|pid:none) Medicago truncatula cultivar R108 ... 38 1.9
AP008217_208(AP008217|pid:none) Oryza sativa (japonica cultivar-... 37 2.5
EU969827_1(EU969827|pid:none) Zea mays clone 336160 unknown mRNA. 37 2.5
FQ378032_67(FQ378032|pid:none) Oryza brachyantha chromosome 11. 37 2.5
EU410304_250(EU410304|pid:none) Vaccinia virus GLV-1h68, complet... 37 2.5
JN408495_1(JN408495|pid:none) Lotus japonicus BTB/POZ ankyrin re... 37 3.3
HQ288144_1(HQ288144|pid:none) Hottentotta judaicus clone Hj0079 ... 37 3.3
FJ532056_1(FJ532056|pid:none) Brassica rapa subsp. pekinensis NP... 37 3.3
JN180860_1(JN180860|pid:none) Pisum sativum cultivar Parvus BTB/... 37 4.3
BC155152_1(BC155152|pid:none) Danio rerio zgc:110075, mRNA (cDNA... 37 4.3
BC092719_1(BC092719|pid:none) Danio rerio zgc:110075, mRNA (cDNA... 37 4.3
BC042246_1(BC042246|pid:none) Xenopus laevis BTB/POZ and zinc-fi... 37 4.3
AM427664_1(AM427664|pid:none) Vitis vinifera contig VV78X250604.... 37 4.3
JN180865_1(JN180865|pid:none) Pisum sativum cultivar SGE BTB/POZ... 37 4.3
JN180862_1(JN180862|pid:none) Pisum sativum cultivar Paloma BTB/... 37 4.3
AP004183_11(AP004183|pid:none) Oryza sativa Japonica Group genom... 37 4.3
CR954214_345(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 36 5.7
DQ121394_178(DQ121394|pid:none) Vaccinia virus strain Lister clo... 36 5.7
FR823386_206(FR823386|pid:none) Neospora caninum Liverpool compl... 36 5.7
AK100472_1(AK100472|pid:none) Oryza sativa Japonica Group cDNA c... 36 5.7
BC043960_1(BC043960|pid:none) Xenopus laevis hypothetical protei... 36 5.7
AC132492_6(AC132492|pid:none) Oryza sativa (japonica cultivar-gr... 36 5.7
CP002160_1979(CP002160|pid:none) Clostridium cellulovorans 743B,... 36 7.4
AC140916_9(AC140916|pid:none) Medicago truncatula clone mth2-12b... 36 7.4
CP001820_52(CP001820|pid:none) Veillonella parvula DSM 2008, com... 36 7.4
AY074524_1(AY074524|pid:none) Arabidopsis thaliana unknown prote... 36 7.4
T15442(T15442)hypothetical protein C07D10.2 - Caenorhabditis ele... 36 7.4
(B7U179) RecName: Full=ARMADILLO BTB ARABIDOPSIS PROTEIN 1; ... 36 7.4
JI164394_1(JI164394|pid:none) TSA: Ascaris suum ASCF_417_5100 mR... 36 7.4
AY678275_240(AY678275|pid:none) Vaccinia virus strain LC16m8, co... 36 7.4
EF087879_1(EF087879|pid:none) Picea sitchensis clone WS02815_I02... 36 7.4
GU591327_69(GU591327|pid:none) Durinskia baltica strain CS-38 ch... 35 9.7
(Q4L7C9) RecName: Full=Phosphoenolpyruvate carboxykinase [ATP]; ... 35 9.7
AY084611_1(AY084611|pid:none) Arabidopsis thaliana clone 113260 ... 35 9.7
(Q1EBV6) RecName: Full=BTB/POZ and MATH domain-containing protei... 35 9.7
HQ407377_179(HQ407377|pid:none) Cowpox virus strain Austria 1999... 35 9.7
(O72736) RecName: Full=Kelch repeat and BTB domain-containing pr... 35 9.7
AL138638_8(AL138638|pid:none) Arabidopsis thaliana DNA chromosom... 35 9.7
(Q54BA2) RecName: Full=Ankyrin repeat, bromo and BTB domain-cont... 35 9.7
>AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717
protein, partial cds.
Length = 751
Score = 57.8 bits (138), Expect = 2e-06
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Frame = -3
Query: 505 VTIKPNEKNDDGTKSSGEFVEISIDSSINRRVFNRFIEFLYTGVLNYLDKNDQ-LQETIA 329
V+I+ D T S V + +DSSI F +++LYTG L D+N++ L
Sbjct: 418 VSIQEEMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTGEL---DENERDLMHIAH 474
Query: 328 LAESVGFKYLASACKNVLGGNEDLNPSIGTFLNDQLGETSKELFFTKKILSDIQFIVEGR 149
+AE + L N+L +N I + + KE K SD+ FI++
Sbjct: 475 IAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECL-AKGTFSDVTFILDDG 533
Query: 148 SIFAHKALIFSRSNVVNALIGRNFIEREGKVEMSDDVTFDSFMAILEYL 2
+I AHK L+ S + + A+ G F+E + + + A+LEYL
Sbjct: 534 TISAHKPLLISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYL 582
Score = 47.0 bits (110), Expect = 0.003
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Frame = -3
Query: 1339 VTIKPNEKNDDGTKSSGEFVEISIDSSINRRVFNRFIEFLYTGVLNYLDKNDQ-LQETIA 1163
V+I+ D T S V + +DSSI F +++LYTG LD+N++ L
Sbjct: 418 VSIQEEMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTG---ELDENERDLMHIAH 474
Query: 1162 LAESVGFKYLASACKNVLGGNEDLNPSIGTFLNDQLGETSKELFFTKKILSDIQFIVEGR 983
+AE + L N+L +N I + + KE K SD+ FI++
Sbjct: 475 IAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKEC-LAKGTFSDVTFILDDG 533
Query: 982 SIFAHXALIFSRSNVVNALIG*KF 911
+I AH L+ S + + A+ G F
Sbjct: 534 TISAHKPLLISSCDWMAAMFGGPF 557
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 4,248,451,832
Number of extensions: 85557034
Number of successful extensions: 221124
Number of sequences better than 10.0: 109
Number of HSP's gapped: 220965
Number of HSP's successfully gapped: 132
Length of query: 539
Length of database: 1,732,582,204
Length adjustment: 137
Effective length of query: 402
Effective length of database: 999,740,023
Effective search space: 401895489246
Effective search space used: 401895489246
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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