Dictyostelium discoideum cDNA Clone FC-IC1620

Sequence FC-IC1620

ACAAATATTC TAAAATCGCC ATGAATGAAT CAAAAGTTAC ATCATCAGAC
ATTTCAACCT TGCCTTCTCT TTCAATGAAA TTTCTACCAA TTAGCGCATT
TACAACATTT GAACGTGAGA AAATCAATGC TTTATGTGCA AAAATTGATC
TGCCTTCAAC GATGAATTGA ATATCAGATA GAATCTTTTT AGTAAAGAAT
AGCTCTTTAC TAGTTTCACC CAATTGGTCA TTTAAGAAAG TGCCAATCGA
TGGATTCAAA TCTTCATTAC CACCCAACAC ATTCTTACAA GCACTTGCTA
AATACTTGAA GCCGACACTC TCTGCCAATG CAATTGTCTC TTGAAGTTGG
TCATTCTTAT CAAGGTAATT CAACACACCA GTGTAAAGAA ACTCAATGAA
TCTATTGAAA ACACGACGAT TTATTGAACT GTCGATTGAG ATCTCGACAA
ATTCACCACT TGATTTAGTG CCGTCATCAT TCTTTTCGTT TGGTTTAATT
GTAACACTAC GAATATTTTT AACCTTACCC TCATTTAAAT CATCCAATTT
GAACTCAGCT TGGTCAGAGG ATAATGTGTA TCCAAATACC CTTCTAAAGG
AATTCAGATG CTGAGCATAA TATAACACGA TGTGCATAAA CTGGTCTCTC
TTCAAAAAAT GTAAATTTAA CATCACTAAA TGATTCACTA TTTAATGGTT
CTCTCATCTC TTTATCATAA GAACTTGTAA TAATATCAAT CCATGGTGCT
TTACCTGCTG GTGGCATNAC TGGTGGAATG GTACCCTCGG NCGCGANCCG
CTAGCCGAAT TCTGCAAT-- --------GA GGTCAAATNT TCTAAAATCG
CCCAGAATGA ATCAAAAGTT ACATCATCAG ACATTTCAAC CTTGGCTTTN
TCTTTCAATG AAATTTCTAC CCAATTAGCG CATTTACAAC ATTTGAACGT
GAGAAAATCA ATGCTTNATG TGCAAAAATT GATCTGCCTT CAACGATGAA
TTGAATATCA GATAGAATCT TTTTAGTAAA GAATAGCTCT TTACTAGTTT
CACCCAATTG GTCATTTAAG AAAGTGCCAA TCGATGGATT CAAATCTTCA
TTACCACCCA ACACATTCTT ACAAGCACTT GCTAAATACT TGAAGCCGAC
ACTCTCTGCC AATGCAATTG TCTCTTGAAG TTGGTCATTC TTATCAAGGT
AATTCAACAC ACCAGTGTAA AGAAACTCAA TGAATCTATT GAAAACACGA
CGATTTATTG AACTGTCGAT TGAGATCTCG ACAAATTCAC CACTTGATTT
AGTGCCGTCA TCATTCTTTT CGTTTGGTTT AATTGTAACA CTACGAATAT
TTTTAACCTT ACCCTCATTT AAATCATCCA ATTTGAACTC AGCTTGGTCA
GAGGATAATG TGTATCCAAA TACCCTTCTA AAGAATTCAG ATGCTGAGCA
TAATATAACA CGATGTGCAT AAACTGGTCT CTCTTCAAAA AATGTAAATT
TAACATCACT AAATGATTCA CTATTTAATG TTTCTCTCAT CTCTTTATCA
TAAGAACTTG TAATAATATC AATNCCATGG TGCTTTACCT GCTGGTGGCA
TAACTGGTGG AATTGGT

Translated Amino Acid Sequence FC-IC1620

kyskiamneskvtssdistlpslsmkflpisafttferekinalcakidlpstmn*isdr
iflvknssllvspnwsfkkvpidgfksslppntflqalakylkptlsanaivs*swsfls
r*fntpv*rnsmnllktrrfielsieistnspldlvpssffsfglivtlrifltlpsfks
snlnsawsednvypntllkefrc*a*yntmcinwslfkkckfnitk*fti*WFSHLFIIR
TCNNINPWCFTCWWHXWWNGTLGRXPLAEFCN---

---EVKXSKIAQNESKVTSSDISTLAXSFNEISTQLAHLQHLNVRKSMLXVQKLICLQR*
ieyqiesf**rialy*fhpighlrkcqsmdsnlhyhpthsykhllnt*srhslpmqlsle
vghsyqgnsthqcketq*iy*khddllncrlrsrqihhli*crhhsfrlv*l*hyeyf*p
yphlnhpi*tqlgqrimciqipf*riqmlsii*hdvhklvslqkm*i*hh*mihylmfls
slyhknl**yqxhgalpaggitggig

Homology FC-IC1620 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-IC1620 (FC-IC1620Q) /CSM/FC-IC/FC-IC1620Q.Seq.d/                  3104   0.0
FC-IC0228 (FC-IC0228Q) /CSM/FC-IC/FC-IC0228Q.Seq.d/                  1522   0.0
FC-IC1572 (FC-IC1572Q) /CSM/FC-IC/FC-IC1572Q.Seq.d/                  1487   0.0
FC-IC0242 (FC-IC0242Q) /CSM/FC-IC/FC-IC0242Q.Seq.d/                  1487   0.0
FC-IC1196 (FC-IC1196Q) /CSM/FC-IC/FC-IC1196Q.Seq.d/                  1461   0.0
FC-IC0284 (FC-IC0284Q) /CSM/FC-IC/FC-IC0284Q.Seq.d/                  1451   0.0
FC-IC1197 (FC-IC1197Q) /CSM/FC-IC/FC-IC1197Q.Seq.d/                  1439   0.0
FC-IC0621 (FC-IC0621Q) /CSM/FC-IC/FC-IC0621Q.Seq.d/                  1439   0.0
FC-IC0027 (FC-IC0027Q) /CSM/FC-IC/FC-IC0027Q.Seq.d/                  1114   0.0
FC-IC0005 (FC-IC0005Q) /CSM/FC-IC/FC-IC0005Q.Seq.d/                   785   0.0

Homology FC-IC1620 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gen...  1289   0.0    4
AL445563|AL445563.1 Mycoplasma pulmonis (strain UAB CTIP) co...    36   2e-05  16
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma...    40   0.007  14
CG110013|CG110013.1 PUIMI40TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.032  2
CC433814|CC433814.1 PUHOU87TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.045  2
CG111380|CG111380.1 PUFRH74TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.046  2
AE006338|AE006338.1 Lactococcus lactis subsp. lactis IL1403 ...    42   0.15   4
BW128099|BW128099.1 Ciona intestinalis cDNA, clone:rcign016n...    36   0.54   2
AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, comple...    32   1.2    16
BX649276|BX649276.2 Zebrafish DNA sequence *** SEQUENCING IN...    36   1.4    9

Homology FC-IC1620 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717 pro...    58   2e-06
AK292863_1(AK292863|pid:none) Homo sapiens cDNA FLJ76193 complet...    58   2e-06
BC148035_1(BC148035|pid:none) Bos taurus Rho-related BTB domain ...    57   4e-06
CR859023_1(CR859023|pid:none) Pongo abelii mRNA; cDNA DKFZp469P2...    56   7e-06
BC026836_1(BC026836|pid:none) Mus musculus Rho-related BTB domai...    55   9e-06
AK122354_1(AK122354|pid:none) Mus musculus mRNA for mKIAA0717 pr...    55   1e-05
AF420001_1(AF420001|pid:none) Mus musculus DBC2 protein (Dbc2) m...    55   1e-05
AK171295_1(AK171295|pid:none) Mus musculus NOD-derived CD11c +ve...    55   1e-05
(O94844) RecName: Full=Rho-related BTB domain-containing protein...    55   2e-05
BC144800_1(BC144800|pid:none) Mus musculus Rho-related BTB domai...    54   2e-05

Homology FC-IC1620 vs Genome