Dictyostelium discoideum cDNA Clone FC-IC1496

Sequence FC-IC1496

ACTCATATTT ATTTAATTAT TAAAACCATA CTAATTACAC CTATATAAAT
TAATAATGCA AAAGGCAATA AGGATTTCCA ACCTAAATAC ATTAATTGAT
CATATCTATA TCTTGGTAAA GTTGCTCTTA CCCAAATAAA ACTACATAAC
ATACCAACTC CTTTCATTGC TCCTAGAATT TTATTACTTA CAATTCCACC
TAAAAAAAAA AAACTGATAA TAATACACTC ATTAGTATTA TATTTGCATA
TTCACCTAAG AAAAATAATG CAAATCCTGT TGATGAATAT TCAACATTAT
ATCCTGAAAC AAGTTCTGCT CCTGCTTCTG GTAAATCAAA AGGTGGTCTA
TTTGTCTCTG CTAAAGCACT AATAAATGCT AATAAAAATC CTGGCAATAA
TGGTATTATA AACCATACTT TTTCTTGATT TTCCATTATT TCTTGCAGAT
TTACTGTTCC TGCGTAAGTT ATTATACTTA ATATAATTAA TCCTAATGCT
ACTTCATATG AAACCATTTG CGCTGCTGAT CGTAATCCTC CTAAAAAGGC
ATATTTTGAA TTACTTGCCC ATCCTGCTAA TATTATTCCA TAAACTCCTA
TCGATGATAT TGCTAAAATA AATATCACTC CACTATTAAT ACTTGCAAAT
ACACTTTGT

Translated Amino Acid Sequence FC-IC1496

thiyliiktilitpi*innakgnkdfqpkyin*SYLYLGKVALTQIKLHNIPTPFIAPRI
LLLTIPPKKKKLIIIHSLVLYLHIHLRKIMQILLMNIQHYILKQVLLLLLVNQKVVYLSL
LKH**mlikilaimvl*tilfldfplfladllflrkllyli*lilmllhmkpfallivil
lkrhilnylpillilfhkllsmillk*islhy*ylqihf

Homology FC-IC1496 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-IC1496 (FC-IC1496Q) /CSM/FC-IC/FC-IC1496Q.Seq.d/                  1235   0.0
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/               860   0.0
FC-IC1497 (FC-IC1497Q) /CSM/FC-IC/FC-IC1497Q.Seq.d/                   773   0.0
FC-IC1494 (FC-IC1494Q) /CSM/FC-IC/FC-IC1494Q.Seq.d/                   490   e-137
SLG623 (SLG623Q) /CSM/SL/SLG6-A/SLG623Q.Seq.d/                         64   3e-09
VSI180 (VSI180Q) /CSM/VS/VSI1-D/VSI180Q.Seq.d/                         40   0.042
SSI172 (SSI172Q) /CSM/SS/SSI1-C/SSI172Q.Seq.d/                         38   0.16
SLH578 (SLH578Q) /CSM/SL/SLH5-D/SLH578Q.Seq.d/                         38   0.16
VSC705 (VSC705Q) /CSM/VS/VSC7-A/VSC705Q.Seq.d/                         36   0.65
VFK219 (VFK219Q) /CSM/VF/VFK2-A/VFK219Q.Seq.d/                         36   0.65

Homology FC-IC1496 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


D16466|D16466.1 Dictyostelium discoideum mitochondrial DNA.       860   0.0    2
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D...   860   0.0    2
AF007261|AF007261.1 Reclinomonas americana mitochondrial DNA...   101   1e-59  10
U17009|U17009.2 Phytophthora infestans mitochondrion, comple...   109   5e-38  7
Z48930|Z48930.1 C.caldarium mitochondrial genes (10kb).            90   4e-34  3
D89861|D89861.1 Cyanidioschyzon merolae mitochondrial DNA, c...    94   8e-34  6
Z47547|Z47547.1 Chondrus crispus complete mitochondrial genome.    68   5e-28  6
AE008670|AE008670.1 Rickettsia conorii Malish 7, section 102...    60   2e-23  5
AJ235273|AJ235273.1 Rickettsia prowazekii strain Madrid E, c...    80   5e-23  11
AF193903|AF193903.1 Cafeteria roenbergensis mitochondrial DN...    78   7e-23  4

Homology FC-IC1496 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q37313) RecName: Full=NADH-ubiquinone oxidoreductase chain 1;  ...   272   e-107
(Q2LCR1) RecName: Full=NADH-ubiquinone oxidoreductase chain 1;  ...   273   e-106
EU275726_11(EU275726|pid:none) Polysphondylium pallidum strain P...   223   1e-73
EU275727_13(EU275727|pid:none) Dictyostelium fasciculatum strain...   226   2e-73
AF007261_10(AF007261|pid:none) Reclinomonas americana mitochondr...   203   3e-63
HQ586061_14(HQ586061|pid:none) Plocamiocolax pulvinata mitochond...   208   9e-63
AF288091_25(AF288091|pid:none) Thraustochytrium aureum mitochond...   206   2e-62
AY354961_1(AY354961|pid:none) Radula complanata NADH dehydrogena...   207   3e-62
AF114794_12(AF114794|pid:none) Porphyra purpurea mitochondrion, ...   207   3e-62
AY354963_1(AY354963|pid:none) Blasia pusilla NADH dehydrogenase ...   207   4e-62

Homology FC-IC1496 vs Genome