Homology FC-IC1496 vs DNA
Query= FC-IC1496 (FC-IC1496Q) /CSM/FC-IC/FC-IC1496Q.Seq.d/
(659 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,356,762 sequences; S,976,024,753 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
D16466|D16466.1 Dictyostelium discoideum mitochondrial DNA. 860 0.0 2
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D... 860 0.0 2
AF007261|AF007261.1 Reclinomonas americana mitochondrial DNA... 101 1e-59 10
U17009|U17009.2 Phytophthora infestans mitochondrion, comple... 109 5e-38 7
Z48930|Z48930.1 C.caldarium mitochondrial genes (10kb). 90 4e-34 3
D89861|D89861.1 Cyanidioschyzon merolae mitochondrial DNA, c... 94 8e-34 6
Z47547|Z47547.1 Chondrus crispus complete mitochondrial genome. 68 5e-28 6
AE008670|AE008670.1 Rickettsia conorii Malish 7, section 102... 60 2e-23 5
AJ235273|AJ235273.1 Rickettsia prowazekii strain Madrid E, c... 80 5e-23 11
AF193903|AF193903.1 Cafeteria roenbergensis mitochondrial DN... 78 7e-23 4
AF494279|AF494279.1 Chaetosphaeridium globosum mitochondrial... 82 4e-22 5
AF222718|AF222718.1 Chrysodidymus synuroideus mitochondrion,... 72 1e-20 6
U02970|U02970.1 Prototheca wickerhamii 263-11 complete mitoc... 68 3e-19 7
AF110138|AF110138.1 Nephroselmis olivacea mitochondrion, com... 62 2e-16 7
AJ277126|AJ277126.1 Pilayella littoralis complete mitochondr... 74 3e-16 2
AF353999|AF353999.1 Mesostigma viride mitochondrion, complet... 64 7e-15 3
X82618|X82618.1 A.thaliana mitochondrial mRNA for subunit 1 ... 86 2e-14 2
AF287134|AF287134.1 Ochromonas danica mitochondrial DNA, com... 62 2e-14 3
AF402141|AF402141.1 Schizophyllum commune mitochondrial DNA,... 74 9e-14 8
AF008237|AF008237.1 Chlamydomonas eugametos mitochondrion, c... 46 9e-14 6
AF373870|AF373870.1 Wolbachia endosymbiont of Brugia malayi ... 66 1e-12 2
AJ344328|AJ344328.1 Laminaria digitata complete mitochondria... 72 1e-12 3
AF295546|AF295546.1 Malawimonas jakobiformis mitochondrial D... 46 2e-12 8
U12386|U12386.1 Acanthamoeba castellanii mitochondrion, comp... 54 2e-10 5
AF288091|AF288091.2 Thraustochytrium aureum mitochondrial DN... 62 2e-09 3
AY267353|AY267353.1 Chara vulgaris mitochondrion, complete g... 60 9e-09 4
AF288092|AF288092.1 Naegleria gruberi mitochondrial DNA, com... 72 1e-08 1
Y13644|Y13644.1 Chlorogonium elongatum partial mitochondtial... 38 2e-08 3
U41288|U41288.1 Allomyces macrogynus mitochondrial DNA, comp... 52 7e-08 4
AF114794|AF114794.1 Porphyra purpurea mitochondrion, complet... 66 1e-07 3
AC004512|AC004512.2 Arabidopsis thaliana chromosome 1 BAC T8... 68 2e-07 1
Y08502|Y08502.1 A.thaliana mitochondrial genome, part B. 68 2e-07 1
X98301|X98301.1 A.thaliana mitochondrial nad1 gene, exons 2 ... 68 2e-07 1
L05401|L05401.1 Arabidopsis thaliana polyubiquitin gene sequ... 68 2e-07 1
AQ957377|AQ957377.1 LERAP43TR LERA Arabidopsis thaliana geno... 68 2e-07 1
BH705280|BH705280.1 BOMFM69TF BO_2_3_KB Brassica oleracea ge... 66 6e-07 1
BZ445885|BZ445885.1 BONFK01TR BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BH597339|BH597339.1 BOHEQ66TF BOHE Brassica oleracea genomic... 66 6e-07 1
BG833138|BG833138.1 951001C12.x1 951 - BMS tissue from Walbo... 66 6e-07 1
BZ485891|BZ485891.1 BONOX72TR BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BH669976|BH669976.1 BOMMZ64TF BO_2_3_KB Brassica oleracea ge... 66 6e-07 1
BZ435323|BZ435323.1 BOOAY69TF BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BH724722|BH724722.1 BOHUD54TR BO_2_3_KB Brassica oleracea ge... 66 6e-07 1
BZ455924|BZ455924.1 BONPU63TF BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BZ418384|BZ418384.1 if22c08.b1 WGS-ZmaysF (DH5a methyl filte... 66 6e-07 1
BZ451180|BZ451180.1 BONDK35TF BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BH979193|BH979193.1 ode94c04.g1 B.oleracea002 Brassica olera... 66 6e-07 1
BH490013|BH490013.1 BOHEH23TF BOHE Brassica oleracea genomic... 66 6e-07 1
BH866576|BH866576.1 hg30d01.x8 WGS-ZmaysF (JM107 adapted met... 66 6e-07 1
CG426110|CG426110.1 01S0576-07B1-B04 UniformMu MuTAIL Librar... 66 6e-07 1
BH977681|BH977681.1 odf94a03.b1 B.oleracea002 Brassica olera... 66 6e-07 1
AP006444|AP006444.1 Brassica napus mitochondrial DNA, comple... 66 6e-07 1
BZ473469|BZ473469.1 BONIB22TR BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BH563289|BH563289.1 BOHOC38TF BOHO Brassica oleracea genomic... 66 6e-07 1
BZ327765|BZ327765.1 id31a06.g1 WGS-ZmaysF (JM107 adapted met... 66 6e-07 1
BH988340|BH988340.1 oei86g06.g1 B.oleracea002 Brassica olera... 66 6e-07 1
BH460167|BH460167.1 BOHNO69TR BOHN Brassica oleracea genomic... 66 6e-07 1
CA169279|CA169279.1 SCJFSB1012A10.b SB1 Saccharum officinaru... 66 6e-07 1
BH506811|BH506811.1 BOHPV40TF BOHP Brassica oleracea genomic... 66 6e-07 1
CB065314|CB065314.1 EST644995 HOGA Medicago truncatula cDNA ... 66 6e-07 1
BZ435119|BZ435119.1 BONGD10TF BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BZ005415|BZ005415.1 oei73e04.b1 B.oleracea002 Brassica olera... 66 6e-07 1
BH596916|BH596916.1 BOGLC76TR BOGL Brassica oleracea genomic... 66 6e-07 1
BH432092|BH432092.1 BOHIN19TR BOHI Brassica oleracea genomic... 66 6e-07 1
BZ316644|BZ316644.1 ia74e10.b1 WGS-ZmaysF (JM107 adapted met... 66 6e-07 1
AK064531|AK064531.1 Oryza sativa (japonica cultivar-group) c... 66 6e-07 1
BH546742|BH546742.1 BOGUU19TF BOGU Brassica oleracea genomic... 66 6e-07 1
CC167388|CC167388.1 ij90f08.g1 WGS-ZmaysF (DH5a methyl filte... 66 6e-07 1
BH921957|BH921957.1 odi73h10.b1 B.oleracea002 Brassica olera... 66 6e-07 1
BZ434143|BZ434143.1 BONRL26TR BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BH693961|BH693961.1 BOHWV18TR BO_2_3_KB Brassica oleracea ge... 66 6e-07 1
M18339|M18339.1 Maize mitochondrial ATPase subunit 9 and S13... 66 6e-07 1
BH502222|BH502222.1 BOGKN85TR BOGK Brassica oleracea genomic... 66 6e-07 1
BH927659|BH927659.1 odh22b07.b1 B.oleracea002 Brassica olera... 66 6e-07 1
BH955772|BH955772.1 odi48b08.b1 B.oleracea002 Brassica olera... 66 6e-07 1
BZ085334|BZ085334.1 lkz68a10.b1 B.oleracea002 Brassica olera... 66 6e-07 1
BH487899|BH487899.1 BOGGY43TR BOGG Brassica oleracea genomic... 66 6e-07 1
BH964533|BH964533.1 odh57a08.g1 B.oleracea002 Brassica olera... 66 6e-07 1
BH440210|BH440210.1 BOGUC47TR BOGU Brassica oleracea genomic... 66 6e-07 1
M63033|M63033.1 Oenothera berteriana mitochondrial NADH:ubiq... 66 6e-07 1
CG179741|CG179741.1 PUFTS88TB ZM_0.6_1.0_KB Zea mays genomic... 66 6e-07 1
BH950726|BH950726.1 odi64d05.g1 B.oleracea002 Brassica olera... 66 6e-07 1
BH484618|BH484618.1 BOHEZ22TF BOHE Brassica oleracea genomic... 66 6e-07 1
BH248726|BH248726.1 BOGAK45TF BOGA Brassica oleracea genomic... 66 6e-07 1
CG179743|CG179743.1 PUFTS88TD ZM_0.6_1.0_KB Zea mays genomic... 66 6e-07 1
BZ468835|BZ468835.1 BONCX62TF BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
CC951464|CC951464.1 BOIEH36TF BO_1.4_1.6_KB_nuc Brassica ole... 66 6e-07 1
BH591801|BH591801.1 BOHEW61TR BOHE Brassica oleracea genomic... 66 6e-07 1
BZ479086|BZ479086.1 BONLM10TR BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
BH672662|BH672662.1 BOHSS67TF BO_2_3_KB Brassica oleracea ge... 66 6e-07 1
BH470990|BH470990.1 BOHPF05TF BOHP Brassica oleracea genomic... 66 6e-07 1
BZ457482|BZ457482.1 BONCR92TR BO_1.6_2_KB_tot Brassica olera... 66 6e-07 1
AF538053|AF538053.1 Monosiga brevicollis mitochondrion, comp... 36 9e-06 9
AL844509|AL844509.1 Plasmodium falciparum chromosome 13. 34 2e-05 25
AF391448|AF391448.1 Gnatholepis scapulostigma NADH dehydroge... 34 2e-05 5
AQ957376|AQ957376.1 LERAP43TF LERA Arabidopsis thaliana geno... 60 4e-05 1
AC005506|AC005506.8 Plasmodium falciparum chromosome 12 clon... 34 5e-05 12
AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromo... 40 6e-05 11
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clon... 32 7e-05 14
AF494278|AF494278.1 Chaetosphaeridium globosum chloroplast, ... 48 1e-04 8
>D16466|D16466.1 Dictyostelium discoideum mitochondrial DNA.
Length = 13232
Score = 860 bits (434), Expect(2) = 0.0
Identities = 443/446 (99%)
Strand = Plus / Minus
Query: 214 ctgataataatacactcattagtattatatttgcatattcacctaagaaaaataatgcaa 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11256 ctgataataatacactcattagtattatatttgcatattcacctaagaaaaataatgcaa 11197
Query: 274 atcctgttgatgaatattcaacattatatcctgaaacaagttctgctcctgcttctggta 333
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 11196 atcctgttgatgaatattcaacattatatcctgaaacaagttctgcttctgcttctggta 11137
Query: 334 aatcaaaaggtggtctatttgtctctgctaaagcactaataaatgctaataaaaatcctg 393
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 11136 aatcaaaaggtggtctatttgtctccgttaaagcactaataaatgctaataaaaatcctg 11077
Query: 394 gcaataatggtattataaaccatactttttcttgattttccattatttcttgcagattta 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11076 gcaataatggtattataaaccatactttttcttgattttccattatttcttgcagattta 11017
Query: 454 ctgttcctgcgtaagttattatacttaatataattaatcctaatgctacttcatatgaaa 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11016 ctgttcctgcgtaagttattatacttaatataattaatcctaatgctacttcatatgaaa 10957
Query: 514 ccatttgcgctgctgatcgtaatcctcctaaaaaggcatattttgaattacttgcccatc 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10956 ccatttgcgctgctgatcgtaatcctcctaaaaaggcatattttgaattacttgcccatc 10897
Query: 574 ctgctaatattattccataaactcctatcgatgatattgctaaaataaatatcactccac 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10896 ctgctaatattattccataaactcctatcgatgatattgctaaaataaatatcactccac 10837
Query: 634 tattaatacttgcaaatacactttgt 659
||||||||||||||||||||||||||
Sbjct: 10836 tattaatacttgcaaatacactttgt 10811
Score = 398 bits (201), Expect(2) = 0.0
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 1 actcatatttatttaattattaaaaccatactaattacacctatataaattaataatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11467 actcatatttatttaattattaaaaccatactaattacacctatataaattaataatgca 11408
Query: 61 aaaggcaataaggatttccaacctaaatacattaattgatcatatctatatcttggtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11407 aaaggcaataaggatttccaacctaaatacattaattgatcatatctatatcttggtaaa 11348
Query: 121 gttgctcttacccaaataaaactacataacataccaactcctttcattgctcctagaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11347 gttgctcttacccaaataaaactacataacataccaactcctttcattgctcctagaatt 11288
Query: 181 ttattacttacaattccacct 201
|||||||||||||||||||||
Sbjct: 11287 ttattacttacaattccacct 11267
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 19,150,261
Number of Sequences: 30356762
Number of extensions: 19150261
Number of successful extensions: 1646838
Number of sequences better than 10.0: 1148
length of query: 659
length of database: S,976,024,753
effective HSP length: 22
effective length of query: 637
effective length of database: S,308,175,989
effective search space: 22491308104993
effective search space used: 22491308104993
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home