Dictyostelium discoideum cDNA Clone FC-IC1475

Sequence FC-IC1475

ACTTGTCCGA AAGATTATTC TAATTCCGCC TCACCTTTGT AAGATTACCC
GCTGAACTTA AGCATATCAG TAAGCGGAGG AAAAGAAACT AACTAGGATT
CCGTCAGTAA CGGCGAGTGA AGACGGAATA GCCCAAGGTT CAAACCTGGA
TCTCTTCGAG GTTAGGTGAT GTGACCTATG GACTGATGGA GCCCGCTGTT
GTGACTGCTA ATTCCGTTTG GAATTTCGAG TCGTAGAAGG TGATAACCCT
GTTCGCAGTA TCACAACAGT TGGACTTTGC CATTAGCTCC ACGAGTAGGA
ATGTCTGAAA TTGCATTCTG AATGGGTGAT AAGATTCATC CAAGGCTAAA
TATATGTTAG GAGATCGATA GCATACAAGT ----------

Translated Amino Acid Sequence FC-IC1475

lserlf*frltfvrlpaelkhiskrrkrn*lgfrq*rrvkte*PKVQTWISSRLGDVTYG
LMEPAVVTANSVWNFES*kvitlfavsqqldfaisstsrnv*ncilng**dsskakymlg
dr*ht---

Homology FC-IC1475 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK396 (VHK396Q) /CSM/VH/VHK3-D/VHK396Q.Seq.d/                        753   0.0
FC-IC1475 (FC-IC1475Q) /CSM/FC-IC/FC-IC1475Q.Seq.d/                   753   0.0
FC-IC1168 (FC-IC1168Q) /CSM/FC-IC/FC-IC1168Q.Seq.d/                   753   0.0
FC-IC0461 (FC-IC0461Q) /CSM/FC-IC/FC-IC0461Q.Seq.d/                   741   0.0
CHI777 (CHI777Q) /CSM/CH/CHI7-D/CHI777Q.Seq.d/                        710   0.0
SHI761 (SHI761Q) /CSM/SH/SHI7-C/SHI761Q.Seq.d/                        708   0.0
CHN482 (CHN482Q) /CSM/CH/CHN4-D/CHN482Q.Seq.d/                        708   0.0
FC-IC0540 (FC-IC0540Q) /CSM/FC-IC/FC-IC0540Q.Seq.d/                   706   0.0
CHK282 (CHK282Q) /CSM/CH/CHK2-D/CHK282Q.Seq.d/                        700   0.0
VFK410 (VFK410Q) /CSM/VF/VFK4-A/VFK410Q.Seq.d/                        698   0.0

Homology FC-IC1475 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY171066|AY171066.1 Dictyostelium discoideum extrachromosoma...   753   0.0    1
X00601|X00601.1 Dictyostelium discoideum ribosomal RNA gene.      737   0.0    1
M19231|M19231.1 Slime mold (D.discoideum) 28S large subunit ...   690   0.0    1
AC121240|AC121240.18 Medicago truncatula clone mth1-51o19, W...   103   1e-41  4
AC122172|AC122172.25 Medicago truncatula clone mth2-27e7, WO...   103   1e-40  4
AC136838|AC136838.17 Medicago truncatula clone mth1-5j15, WO...   103   2e-39  4
AC137509|AC137509.11 Medicago truncatula clone mth2-20l21, W...   103   3e-39  4
AC129003|AC129003.4 Rattus norvegicus clone CH230-6L3, *** S...   107   1e-37  3
AY112929|AY112929.1 Salal associated fungal clone UBCtra1522...   147   1e-31  1
U15003|U15003.1 Opisthorchis viverrini 28S rRNA gene, partia...   137   3e-31  2

Homology FC-IC1475 vs Protein

Sequences producing significant alignments:                      (bits) Value


HE601628_128(HE601628|pid:none) Schistosoma mansoni strain Puert...    42   0.014
AE010299_1578(AE010299|pid:none) Methanosarcina acetivorans str....    38   0.21
CP000930_2260(CP000930|pid:none) Heliobacterium modesticaldum Ic...    37   0.47
GU474883_37(GU474883|pid:none) Uncultured delta proteobacterium ...    35   1.4
GU474879_27(GU474879|pid:none) Uncultured delta proteobacterium ...    35   1.4
GU474881_38(GU474881|pid:none) Uncultured Acidobacteriales bacte...    35   1.4
GU474914_23(GU474914|pid:none) Uncultured delta proteobacterium ...    35   1.8
CP000423_1127(CP000423|pid:none) Lactobacillus casei ATCC 334, c...    33   5.1
GU474896_16(GU474896|pid:none) Uncultured Acidobacteria bacteriu...    33   5.1
CP002616_1370(CP002616|pid:none) Lactobacillus casei LC2W, compl...    33   5.1

Homology FC-IC1475 vs Genome