Homology FC-IC1431 vs DNA
Query= FC-IC1431 (FC-IC1431Q) /CSM/FC-IC/FC-IC1431Q.Seq.d/
(430 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/a/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/a/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/a/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/a/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/a/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/a/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/a/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/a/new_est_rest1.seq
30,679,270 sequences; T,251,742,201 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D... 402 e-108 1
D16466|D16466.1 Dictyostelium discoideum mitochondrial DNA. 402 e-108 1
U21880|U21880.1 Dictyostelium discoideum mitochondrion large... 402 e-108 1
AF295546|AF295546.1 Malawimonas jakobiformis mitochondrial D... 66 1e-39 4
AB076666|AB076666.1 Oryza sativa (japonica cultivar-group) m... 58 5e-30 5
AP000397|AP000397.1 Beta vulgaris subsp. vulgaris mitochondr... 58 5e-30 4
Z67753|Z67753.1 Odontella sinensis complete chloroplast genome. 80 1e-24 4
AL591974|AL591974.1 Listeria monocytogenes strain EGD, compl... 56 1e-18 4
AL596164|AL596164.1 Listeria innocua Clip11262 complete geno... 56 5e-18 5
AF494279|AF494279.1 Chaetosphaeridium globosum mitochondrial... 60 7e-18 3
AL596170|AL596170.1 Listeria innocua Clip11262 complete geno... 56 9e-18 4
AX638811|AX638811.1 Sequence 1 from Patent WO0101118. 56 1e-17 4
AL591983|AL591983.1 Listeria monocytogenes strain EGD, compl... 56 2e-17 5
AX641672|AX641672.1 Sequence 2862 from Patent WO0101118. 56 3e-17 5
AX415067|AX415067.1 Sequence 2058 from Patent WO0228891. 56 3e-17 5
AY267353|AY267353.1 Chara vulgaris mitochondrion, complete g... 72 4e-17 2
L36472|L36472.1 Staphylococcus aureus lysyl-tRNA sythetase g... 56 4e-17 4
BU671902|BU671902.1 HaEF274 Helianthus annuus Early Flower H... 58 6e-17 3
AB031211|AB031211.1 Bacillus halodurans lysS, rrnC-16S, trn-... 56 1e-16 4
AF166114|AF166114.1 Mesostigma viride chloroplast DNA, compl... 56 1e-16 6
BE034465|BE034465.1 MH05D02 MH Mesembryanthemum crystallinum... 58 2e-16 2
BF480502|BF480502.1 L0-2447T3 Ice plant Lambda Uni-Zap XR ex... 58 2e-16 2
BE577401|BE577401.1 L48-2240T3 Ice plant Lambda Uni-Zap XR e... 58 2e-16 2
AP005672|AP005672.1 Physcomitrella patens subsp. patens chlo... 56 3e-16 5
U38804|U38804.1 Porphyra purpurea chloroplast, complete genome. 64 5e-16 5
X04465|X04465.1 Marchantia polymorpha chloroplast genome DNA. 56 6e-16 6
AP000423|AP000423.1 Arabidopsis thaliana chloroplast genomic... 56 7e-16 7
AJ400848|AJ400848.1 Spinacia oleracea complete chloroplast g... 56 7e-16 5
BE522665|BE522665.1 M27G11STM Arabidopsis developing seed Ar... 60 8e-16 2
AB086179|AB086179.1 Anthoceros formosae chloroplast DNA, com... 56 9e-16 5
AP004638|AP004638.1 Psilotum nudum chloroplast DNA, complete... 56 1e-15 6
U03732|U03732.1 Acanthamoeba castellanii Neff mitochondrion ... 72 1e-15 3
CB091832|CB091832.1 he97a10.g1 Cycad Leaf Library (NYBG) Cyc... 60 1e-15 2
D26185|D26185.1 B. subtilis DNA, 180 kilobase region of repl... 56 1e-15 5
BH538312|BH538312.1 BOGUX82TR BOGU Brassica oleracea genomic... 58 2e-15 2
AJ301784|AJ301784.1 Sesbania rostrata EST clone SSH-52. 58 2e-15 2
AV414479|AV414479.1 Lotus corniculatus var. japonicus cDNA c... 58 2e-15 2
BE527106|BE527106.1 M67K24STM Arabidopsis developing seed Ar... 58 2e-15 2
BE528155|BE528155.1 M70L22STM Arabidopsis developing seed Ar... 58 2e-15 2
CD799351|CD799351.1 EST 13012 Green Grape (harvested at 9 a.... 58 2e-15 2
BE528603|BE528603.1 M72E11STM Arabidopsis developing seed Ar... 58 2e-15 2
BE529905|BE529905.1 M76G03STM Arabidopsis developing seed Ar... 58 2e-15 2
X15901|X15901.1 Oryza sativa complete chloroplast genome. 56 2e-15 4
AB042240|AB042240.3 Triticum aestivum chloroplast DNA, compl... 56 2e-15 4
Z99104|Z99104.2 Bacillus subtilis complete genome (section 1... 56 2e-15 6
U30821|U30821.1 Cyanophora paradoxa cyanelle, complete genome. 56 2e-15 4
CA214951|CA214951.1 SCSBAD1126C09.g AD1 Saccharum officinaru... 58 2e-15 2
AV418673|AV418673.1 Lotus corniculatus var. japonicus cDNA c... 58 2e-15 2
BI098885|BI098885.1 IP1_34_E02.b1_A002 Immature pannicle 1 (... 58 2e-15 2
AV410602|AV410602.1 Lotus corniculatus var. japonicus cDNA c... 58 2e-15 2
AC144549|AC144549.1 Sorghum bicolor clone sorchlor map chlor... 56 2e-15 4
AV420330|AV420330.1 Lotus corniculatus var. japonicus cDNA c... 58 2e-15 2
AV415153|AV415153.1 Lotus corniculatus var. japonicus cDNA c... 58 2e-15 2
AL089212|AL089212.1 Arabidopsis thaliana genome survey seque... 58 2e-15 2
B76895|B76895.1 T28G2TR TAMU Arabidopsis thaliana genomic cl... 58 2e-15 2
AV417463|AV417463.1 Lotus corniculatus var. japonicus cDNA c... 58 2e-15 2
AV415797|AV415797.1 Lotus corniculatus var. japonicus cDNA c... 58 2e-15 2
BJ282267|BJ282267.1 Triticum aestivum cDNA clone:whr25n17, 5... 58 2e-15 2
BX569685|BX569685.1 Oryza sativa genomic DNA, chromosome 4, ... 56 3e-15 4
AJ500736|AJ500736.1 Medicago truncatula EST, clone mtgmacc12... 58 3e-15 2
BI942375|BI942375.1 sh66b02.y1 Gm-c1015 Glycine max cDNA clo... 58 3e-15 2
AL096256|AL096256.1 Arabidopsis thaliana genome survey seque... 58 3e-15 2
AU252083|AU252083.1 Lotus corniculatus var. japonicus flower... 58 3e-15 2
AP002983|AP002983.1 Lotus corniculatus var. japonicus chloro... 56 3e-15 4
AL662978|AL662978.3 Oryza sativa genomic DNA, chromosome 4, ... 56 3e-15 4
AJ428413|AJ428413.1 Calycanthus fertilis var. ferax complete... 56 3e-15 4
AV422888|AV422888.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
T46344|T46344.1 9607 Lambda-PRL2 Arabidopsis thaliana cDNA c... 58 3e-15 2
AV414913|AV414913.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AV525054|AV525054.1 Arabidopsis thaliana cDNA clone:APD15h08... 58 3e-15 2
BE524811|BE524811.1 M54E9STM Arabidopsis developing seed Ara... 58 3e-15 2
AV427300|AV427300.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AV426287|AV426287.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AV426360|AV426360.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
BI643151|BI643151.1 RL1AR_D01 Sugar beet root cDNA library (... 58 3e-15 2
AF375995|AF375995.1 Candidatus Kuenenia stuttgartiensis 16S ... 70 3e-15 2
Z00044|Z00044.1 Nicotiana tabacum chloroplast genome DNA. 56 3e-15 4
AV425114|AV425114.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AJ316582|AJ316582.1 Atropa belladonna complete chloroplast g... 56 3e-15 4
AJ542328|AJ542328.1 Helianthus annuus EST, clone HN0009G0. 58 3e-15 2
AV411373|AV411373.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AV424179|AV424179.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
B73878|B73878.1 T25N12TR TAMU Arabidopsis thaliana genomic c... 58 3e-15 2
CG944050|CG944050.1 MBEGH10TR mth2 Medicago truncatula genom... 58 3e-15 2
AV425416|AV425416.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AV414483|AV414483.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AV410543|AV410543.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AV407545|AV407545.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
CB322170|CB322170.1 EST0288 Mature leaf blade cDNA subtracti... 58 3e-15 2
AV426672|AV426672.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AV408553|AV408553.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
BQ740235|BQ740235.1 FI-SSH-EST113 Maize Subtracted cDNA Libr... 58 3e-15 2
AJ474571|AJ474571.1 Hordeum vulgare EST clone S0000800148E12F1. 58 3e-15 2
AV428402|AV428402.1 Lotus corniculatus var. japonicus cDNA c... 58 3e-15 2
AJ506156|AJ506156.2 Amborella trichopoda chloroplast genomic... 56 3e-15 4
AV423171|AV423171.1 Lotus corniculatus var. japonicus cDNA c... 58 4e-15 2
AJ271079|AJ271079.2 Oenothera elata subsp. hookeri chloropla... 56 4e-15 4
AU197610|AU197610.1 Oryza sativa (japonica cultivar-group) c... 58 4e-15 2
H36841|H36841.1 14970 Lambda-PRL2 Arabidopsis thaliana cDNA ... 58 4e-15 2
AU197410|AU197410.1 Oryza sativa (japonica cultivar-group) c... 58 4e-15 2
>AB000109|AB000109.1 Dictyostelium discoideum mitochondrial DNA,
complete sequence.
Length = 55564
Score = 402 bits (203), Expect = e-108
Identities = 206/207 (99%)
Strand = Plus / Plus
Query: 224 gtacttaaaccgacactggttaattgatagaatatattaaagtgtagaatgaatgattct 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20125 gtacttaaaccgacactggttaattgatagaatatattaaagtgtagaatgaatgattct 20184
Query: 284 gaaggaactcggcaaaataactccgtaactgcgggagaaggagagcctttgttgtaaaaa 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20185 gaaggaactcggcaaaataactccgtaactgcgggagaaggagagcctttgttgtaaaaa 20244
Query: 344 atgaaggtcacagtaaagaaggggtggcgactgtttaataaaaacacaggattctgcaaa 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20245 atgaaggtcacagtaaagaaggggtggcgactgtttaataaaaacacaggattctgcaaa 20304
Query: 404 atgacaacatgatgtatagggtctgcg 430
||| |||||||||||||||||||||||
Sbjct: 20305 atggcaacatgatgtatagggtctgcg 20331
Score = 398 bits (201), Expect = e-107
Identities = 204/205 (99%)
Strand = Plus / Plus
Query: 1 acttaaaccgacactggttaattgatagaatatattaaagtgtagaatgaatgattctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20127 acttaaaccgacactggttaattgatagaatatattaaagtgtagaatgaatgattctga 20186
Query: 61 aggaactcggcaaaataactccgtaactgcgggagaaggagagcctttgttgtaaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20187 aggaactcggcaaaataactccgtaactgcgggagaaggagagcctttgttgtaaaaaat 20246
Query: 121 gaaggtcacagtaaagaaggggtggcgactgtttaataaaaacacaggattctgcaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20247 gaaggtcacagtaaagaaggggtggcgactgtttaataaaaacacaggattctgcaaaat 20306
Query: 181 gacaacatgatgtatagggtctgcg 205
| |||||||||||||||||||||||
Sbjct: 20307 ggcaacatgatgtatagggtctgcg 20331
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 10,881,610
Number of Sequences: 30679270
Number of extensions: 10881610
Number of successful extensions: 843514
Number of sequences better than 10.0: 5044
length of query: 430
length of database: T,251,742,201
effective HSP length: 22
effective length of query: 408
effective length of database: S,576,798,261
effective search space: 14515333690488
effective search space used: 14515333690488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home