Homology FC-IC1296 vs Protein
Query= FC-IC1296 (FC-IC1296Q) /CSM/FC-IC/FC-IC1296Q.Seq.d/
(559 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC116330_42(AC116330|pid:none) Dictyostelium discoideum chromoso... 37 0.41
CP002551_1771(CP002551|pid:none) Methanobacterium sp. AL-21, com... 37 0.54
CP000712_1048(CP000712|pid:none) Pseudomonas putida F1, complete... 37 0.54
CP001368_536(CP001368|pid:none) Escherichia coli O157:H7 str. TW... 35 1.6
CP001846_570(CP001846|pid:none) Escherichia coli O55:H7 str. CB9... 35 2.1
CU928158_504(CU928158|pid:none) Escherichia fergusonii ATCC 3546... 34 4.6
>AC116330_42(AC116330|pid:none) Dictyostelium discoideum chromosome
2 map 3191214-3323468 strain AX4, complete sequence.
&AC116330_44(AC116330|pid:none)
Length = 235
Score = 37.4 bits (85), Expect = 0.41
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +3
Query: 318 FGCEASLEVTTGFEYEETVTSETTHTWXQTLTEGTYIVYQNVLVYAYTIVLSVNQTNTIN 497
F EA + FEY SET ++ Q L+ +Y V+Q+++ YAY ++ S++ +
Sbjct: 122 FDFEAKFKFIRKFEYSADFYSETKTSYSQYLSTTSY-VHQSLVTYAYKMIDSIDH-RRLA 179
Query: 498 QYNPGMNLRYI 530
Q NP + ++I
Sbjct: 180 QLNPDFDWKFI 190
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,391,246,449
Number of extensions: 25572078
Number of successful extensions: 64568
Number of sequences better than 10.0: 6
Number of HSP's gapped: 64512
Number of HSP's successfully gapped: 6
Length of query: 186
Length of database: 1,732,582,204
Length adjustment: 124
Effective length of query: 62
Effective length of database: 1,069,279,792
Effective search space: 66295347104
Effective search space used: 66295347104
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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