Dictyostelium discoideum cDNA Clone FC-IC1296

Sequence FC-IC1296

ACTGAAATTA AGGCAAGTGC ATCAGCAGGG TTCTTTGGTT GCAAAGCATC
ACTCGAAGTG ACCACTGGGT TCTAATATGA AGAAACTGCC CATCAGAGAC
AACTCACACA TGGAAACAAA CTCTCACTGA GGGAACTTAT ATTGTTTATC
AAAATGTGCT TGTTTATGCA TATACAATAG TATTATCACT AAATCAAACT
AATACTATAA ATCAATATAA CCCAAGTATG AATTTGAGAT ATATCCAACA
AATTGATCGT GCTGTTATGT TTGT------ ----ACTGAA ATTAAGGCAA
GTGCATCAGC AGGGTTCTTT GGTTGTGAAG CATCACTCGA AGTGACCACT
GGTTTCGAAT ATGAAGAAAC TGTTACATCA GAGACAACTC ACACATGGNA
ACAAACTCTC ACTGAGGGAA CTTATATTGT TTATCAAAAT GTTCTTGTTT
ATGCATATAC AATAGTATTA TCAGTAAATC AAACTAATAC TATAAATCAA
TATAACCCAG GTATGAATTT GAGATATATC CAACAAATAG ATCGTGCTGT
TATGTTTGT

Translated Amino Acid Sequence FC-IC1296

*n*gkcisrvlwlqsitrsdhwvli*RNCPSETTHTWKQTLTEGTYIVYQNVLVYAYTIV
LSLNQTNTINQYNPSMNLRYIQQIDRAVMF---

---TEIKASASAGFFGCEASLEVTTGFEYEETVTSETTHTWXQTLTEGTYIVYQNVLVYA
YTIVLSVNQTNTINQYNPGMNLRYIQQIDRAVMF

Homology FC-IC1296 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-IC1296 (FC-IC1296Q) /CSM/FC-IC/FC-IC1296Q.Seq.d/                  1043   0.0
FC-IC1078 (FC-IC1078Q) /CSM/FC-IC/FC-IC1078Q.Seq.d/                   922   0.0
VSB592 (VSB592Q) /CSM/VS/VSB5-D/VSB592Q.Seq.d/                        531   e-150
VHP850 (VHP850Q) /CSM/VH/VHP8-C/VHP850Q.Seq.d/                        531   e-150
VHI811 (VHI811Q) /CSM/VH/VHI8-A/VHI811Q.Seq.d/                        531   e-150
VHI264 (VHI264Q) /CSM/VH/VHI2-C/VHI264Q.Seq.d/                        531   e-150
VHI256 (VHI256Q) /CSM/VH/VHI2-C/VHI256Q.Seq.d/                        531   e-150
VHH634 (VHH634Q) /CSM/VH/VHH6-B/VHH634Q.Seq.d/                        531   e-150
VHG246 (VHG246Q) /CSM/VH/VHG2-B/VHG246Q.Seq.d/                        531   e-150
VHD159 (VHD159Q) /CSM/VH/VHD1-C/VHD159Q.Seq.d/                        531   e-150

Homology FC-IC1296 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


X94341|X94341.1 D.discoideum mRNA for unknown protein with h...   280   e-133  3
U48706|U48706.1 Dictyostelium discoideum small aggregate for...    50   1e-08  2
AC015690|AC015690.3 Homo sapiens chromosome 11 clone RP11-34...    40   2e-04  4
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, comple...    34   0.17   11
AC099950|AC099950.1 Mus musculus clone RP23-19H3, LOW-PASS S...    38   0.29   2
AC133326|AC133326.2 Rattus norvegicus clone CH230-377C13, **...    38   0.34   5
AC128338|AC128338.3 Rattus norvegicus clone CH230-47L24, WOR...    34   0.46   8
AC138059|AC138059.3 Homo sapiens chromosome 3 clone RP11-195...    46   0.51   1
AC018352|AC018352.23 Homo sapiens 3 BAC RP11-124O2 (Roswell ...    46   0.51   1
AC138467|AC138467.2 Homo sapiens clone RP11-124O2, WORKING D...    46   0.51   1

Homology FC-IC1296 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116330_42(AC116330|pid:none) Dictyostelium discoideum chromoso...    37   0.41
CP002551_1771(CP002551|pid:none) Methanobacterium sp. AL-21, com...    37   0.54
CP000712_1048(CP000712|pid:none) Pseudomonas putida F1, complete...    37   0.54
CP001368_536(CP001368|pid:none) Escherichia coli O157:H7 str. TW...    35   1.6
CP001846_570(CP001846|pid:none) Escherichia coli O55:H7 str. CB9...    35   2.1
CU928158_504(CU928158|pid:none) Escherichia fergusonii ATCC 3546...    34   4.6

Homology FC-IC1296 vs Genome