Homology FC-IC1185 vs DNA
Query= FC-IC1185 (FC-IC1185Q) /CSM/FC-IC/FC-IC1185Q.Seq.d/
/CSM/FC-IC/FC-IC1185Q.Seq.d/
(315 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
est_mous1.seq; est_mous2.seq; est_mous3.seq;
/db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,085,552 sequences; S,511,521,040 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
M62610|M62610.1 D.disocoideum ras mRNA, complete cds. 68 2e-28 5
Z11804|Z11804.1 D.discoideum ras gene. 50 1e-27 6
BE844677|BE844677.1 EST422 Apis mellifera male antennae Lamb... 66 6e-19 3
Z18926|Z18926.1 D.discoideum rasC gene. 78 1e-17 3
AZ691875|AZ691875.1 ENTMF15TR Entamoeba histolytica Sheared ... 48 6e-11 3
BH135048|BH135048.1 ENTNY93TR Entamoeba histolytica Sheared ... 48 6e-11 3
X89037|X89037.1 D.minutum DNA for ras2 gene. 42 8e-09 3
U01051|U01051.1 Entamoeba histolytica HM-1:IMSS rap homologu... 66 3e-08 2
BU634836|BU634836.1 031H04 Infected Arabidopsis Leaf Arabido... 56 9e-08 3
AF177670|AF177670.1 Candida albicans Ras1p (RAS1) gene, comp... 66 3e-07 1
BH162754|BH162754.1 ENTRC18TF Entamoeba histolytica Sheared ... 66 3e-07 1
AZ677576|AZ677576.1 ENTLH55TR Entamoeba histolytica Sheared ... 66 3e-07 1
U01052|U01052.1 Entamoeba histolytica HM-1:IMSS rap homologu... 66 3e-07 1
AZ674583|AZ674583.1 ENTGZ70TR Entamoeba histolytica Sheared ... 38 2e-06 3
BM439222|BM439222.1 GIT0000029 Root-induced cDNA library fro... 62 5e-06 1
BE396235|BE396235.1 601311406F1 NIH_MGC_44 Homo sapiens cDNA... 42 3e-05 2
BH156979|BH156979.1 ENTSV19TR Entamoeba histolytica Sheared ... 48 3e-05 2
BP189351|BP189351.1 Dugesia japonica cDNA, clone: 06365_HH, ... 54 6e-05 2
BP520813|BP520813.1 Hydra magnipapillata cDNA, clone:hmp_18285. 58 7e-05 1
AC115610|AC115610.2 Dictyostelium discoideum chromosome 2 ma... 58 7e-05 1
CF655899|CF655899.1 tac49a11.y1 Hydra EST -IV Hydra magnipap... 58 7e-05 1
CF655159|CF655159.1 tac85g01.y1 Hydra EST -IV Hydra magnipap... 58 7e-05 1
X70839|X70839.1 H.magnipapillata mRNA for RAS2 protein. 58 7e-05 1
CF600116|CF600116.1 tac49a11.x1 Hydra EST -IV Hydra magnipap... 58 7e-05 1
AF134252|AF134252.1 Candida albicans Ras homolog type B gene... 58 7e-05 1
AF134251|AF134251.1 Candida albicans Ras homolog type A gene... 58 7e-05 1
AC117267|AC117267.1 Dictyostelium discoideum chromosome 2 ma... 58 7e-05 1
X02331|X02331.1 Fission yeast ras-gene for SPRAS-protein. 44 1e-04 2
Z14134|Z14134.1 D.discoideum rasS gene encoding ras-related ... 38 1e-04 3
AZ930961|AZ930961.1 474.dhz60e10.s1 Saccharomyces unisporus ... 44 0.001 2
BD190302|BD190302.1 Elk1 phosphorylation related gene. 42 0.004 2
AX780067|AX780067.1 Sequence 2224 from Patent WO03039443. 42 0.004 2
AX587638|AX587638.1 Sequence 108 from Patent WO0246467. 42 0.004 2
M31468|M31468.1 Human ras-like protein mRNA, complete cds, c... 42 0.004 2
AF493924|AF493924.1 Homo sapiens Ras family small GTP bindin... 42 0.004 2
BG110274|BG110274.1 602279138F1 NIH_MGC_86 Homo sapiens cDNA... 42 0.004 2
M96622|M96622.1 Dictyostelium discoideum rasB mRNA, complete... 48 0.005 2
CB554385|CB554385.1 MMSP0025_G08 MMSP Macaca mulatta cDNA, m... 42 0.005 2
CD642522|CD642522.1 AGENCOURT_14575532 NIA Human H1 Embryoni... 42 0.005 2
AI207768|AI207768.1 ao89a09.x1 Schiller meningioma Homo sapi... 42 0.005 2
CB961515|CB961515.1 AGENCOURT_13893151 NIH_MGC_148 Homo sapi... 42 0.006 2
BG193741|BG193741.1 RST12877 Athersys RAGE Library Homo sapi... 42 0.006 2
BG468294|BG468294.1 602509892F1 NIH_MGC_15 Homo sapiens cDNA... 42 0.006 2
BE887570|BE887570.1 601511929F1 NIH_MGC_71 Homo sapiens cDNA... 42 0.006 2
BG028482|BG028482.1 602294393F1 NIH_MGC_86 Homo sapiens cDNA... 42 0.007 2
BX324335|BX324335.1 human full-length cDNA 5-PRIME end of cl... 42 0.008 2
X03771|X03771.1 Yeast (Schizosaccharomyces pombe) RAS gene. 44 0.008 2
BU507954|BU507954.1 AGENCOURT_10128261 NIH_MGC_71 Homo sapie... 42 0.008 2
BM906561|BM906561.1 AGENCOURT_6621562 NIH_MGC_125 Homo sapie... 42 0.009 2
BC013106|BC013106.1 Homo sapiens related RAS viral (r-ras) o... 42 0.009 2
BD190301|BD190301.1 Elk1 phosphorylation related gene. 42 0.010 2
BE925586|BE925586.1 PM3-AN0091-270800-002-g10 AN0091 Homo sa... 40 0.012 2
BH149610|BH149610.1 ENTPO56TF Entamoeba histolytica Sheared ... 38 0.014 2
AZ543510|AZ543510.1 ENTGN91TF Entamoeba histolytica Sheared ... 38 0.014 2
AZ671197|AZ671197.1 ENTLP76TF Entamoeba histolytica Sheared ... 38 0.014 2
AZ675652|AZ675652.1 ENTMJ76TF Entamoeba histolytica Sheared ... 38 0.014 2
U01054|U01054.1 Entamoeba histolytica HM-1:IMSS ras homologu... 38 0.014 2
X69198|X69198.1 Variola virus DNA complete genome. 34 0.023 7
L22579|L22579.1 Variola major virus (strain Bangladesh-1975)... 34 0.023 7
AC084681|AC084681.1 Caenorhabditis briggsae cosmid G47N22, c... 34 0.023 4
Y16780|Y16780.1 variola minor virus complete genome. 34 0.024 7
BX247887|BX247887.4 Zebrafish DNA sequence *** SEQUENCING IN... 46 0.046 2
AF482758|AF482758.2 Cowpox virus strain Brighton Red, comple... 34 0.055 7
AR022306|AR022306.1 Sequence 5 from patent US 5792638. 42 0.059 2
BI761398|BI761398.1 603044208F1 NIH_MGC_116 Homo sapiens cDN... 42 0.063 2
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 32 0.065 7
Y18167|Y18167.1 Suberites domuncula mRNA for ras protein. 48 0.069 1
M27887|M27887.1 Artemia sp. p21 ras-like protein gene, parti... 48 0.069 1
AL929007|AL929007.6 Zebrafish DNA sequence from clone CH211-... 32 0.073 7
BU179081|BU179081.1 AGENCOURT_7950851 NIH_MGC_71 Homo sapien... 42 0.088 2
AL575330|AL575330.2 human full-length cDNA 5-PRIME end of cl... 38 0.11 2
AJ344259|AJ344259.1 Sulfolobus virus SIRV-2 genomic DNA. 34 0.14 4
BX294109|BX294109.4 Zebrafish DNA sequence *** SEQUENCING IN... 32 0.19 5
Z98597|Z98597.1 S.pombe chromosome I cosmid c17H9. 44 0.19 2
E00393|E00393.1 C-K-ras oncogene. 30 0.20 3
M35505|M35505.1 Human PR371 c-K-ras oncogene mRNA, 5' end. 30 0.20 3
BG721590|BG721590.1 602695712F1 NIH_MGC_97 Homo sapiens cDNA... 42 0.21 2
AL844507|AL844507.1 Plasmodium falciparum chromosome 8. 34 0.22 10
AF095689|AF095689.1 Vaccinia virus (strain Tian Tan) complet... 34 0.23 7
BX284688|BX284688.7 Zebrafish DNA sequence *** SEQUENCING IN... 38 0.23 5
AL928838|AL928838.8 Zebrafish DNA sequence from clone CH211-... 32 0.24 5
M35027|M35027.1 Vaccinia virus, complete genome. 34 0.24 7
BI861438|BI861438.1 603386665F1 NIH_MGC_87 Homo sapiens cDNA... 42 0.25 2
AY243312|AY243312.1 Vaccinia virus strain WR, complete genome. 34 0.26 7
BF588730|BF588730.1 7i08e03.x1 NCI_CGAP_Co16 Homo sapiens cD... 30 0.27 3
CF402746|CF402746.1 RTWW1_22_H08.g1_A015 Well-watered loblol... 46 0.27 1
U03023|U03023.1 Aspergillus nidulans Ras-like protein mRNA, ... 46 0.27 1
AA476848|AA476848.1 zu29a08.r1 Soares ovary tumor NbHOT Homo... 30 0.28 3
AI740449|AI740449.1 wg15e08.x1 Soares_NSF_F8_9W_OT_PA_P_S1 H... 30 0.28 3
BG110348|BG110348.1 602279238F1 NIH_MGC_86 Homo sapiens cDNA... 42 0.29 2
AL699217|AL699217.1 Homo sapiens mRNA; EST DKFZp686K07112_r1... 30 0.29 3
BG428983|BG428983.1 602500591F1 NIH_MGC_75 Homo sapiens cDNA... 42 0.30 2
AX481415|AX481415.1 Sequence 29 from Patent WO02055693. 30 0.31 3
AR306193|AR306193.1 Sequence 2 from patent US 6548261. 30 0.31 3
AR306192|AR306192.1 Sequence 1 from patent US 6548261. 30 0.31 3
AF493917|AF493917.1 Homo sapiens Ras family small GTP bindin... 30 0.31 3
AR077283|AR077283.1 Sequence 83 from patent US 5962243. 30 0.31 3
BG028932|BG028932.1 602293047F1 NIH_MGC_86 Homo sapiens cDNA... 42 0.32 2
BE873011|BE873011.1 601451021F1 NIH_MGC_65 Homo sapiens cDNA... 42 0.32 2
AI808924|AI808924.1 wh74a03.x1 NCI_CGAP_CLL1 Homo sapiens cD... 30 0.34 3
>M62610|M62610.1 D.disocoideum ras mRNA, complete cds.
Length = 593
Score = 67.9 bits (34), Expect(5) = 2e-28
Identities = 85/102 (83%)
Strand = Plus / Minus
Query: 198 ttgtttacgatatgaatcttcaattgttggatcataataataaacaaaatgatttgaaat 257
|||||||||||| ||||||||||||||||||||| | || | |||||||| | |||
Sbjct: 161 ttgtttacgataactatcttcaattgttggatcatattcatcatcaaaatgaacttgaat 102
Query: 258 aaattgaattgttactgctgttttaccgacaccaccatcacc 299
||||||||||||| ||| ||||||| ||||||||| ||||
Sbjct: 101 taattgaattgttaatgcacttttaccaacaccaccaccacc 60
Score = 50.1 bits (25), Expect(5) = 2e-28
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 54 atcaaatgacgatcttgatgtaattgaataaac 86
|||| |||| |||||||||||||||||||||||
Sbjct: 305 atcatatgatgatcttgatgtaattgaataaac 273
Score = 44.1 bits (22), Expect(5) = 2e-28
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 137 attcatcttgacctgctgtatctaatatatctaa 170
|||| ||||||||||| |||||||| ||||||||
Sbjct: 222 attcctcttgacctgcagtatctaaaatatctaa 189
Score = 30.2 bits (15), Expect(5) = 2e-28
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 27 aatttgttctctaaa 41
|||||||||||||||
Sbjct: 332 aatttgttctctaaa 318
Score = 26.3 bits (13), Expect(5) = 2e-28
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 116 attgatctctcat 128
|||||||||||||
Sbjct: 243 attgatctctcat 231
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 7,796,946
Number of Sequences: 30085552
Number of extensions: 7796946
Number of successful extensions: 634431
Number of sequences better than 10.0: 634
length of query: 315
length of database: S,511,521,040
effective HSP length: 22
effective length of query: 293
effective length of database: R,849,638,896
effective search space: 10210944196528
effective search space used: 10210944196528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home