Homology FC-IC1171 vs Protein
Query= FC-IC1171 (FC-IC1171Q) /CSM/FC-IC/FC-IC1171Q.Seq.d/
(432 letters)
Database: nrp_B
5,032,459 sequences; 1,626,962,036 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q75J93) RecName: Full=Circularly permutated Ras protein 1; ... 245 5e-65
CP000854_5122(CP000854|pid:none) Mycobacterium marinum M, comple... 37 0.26
CP000384_2867(CP000384|pid:none) Mycobacterium sp. MCS, complete... 37 0.33
CP001341_322(CP001341|pid:none) Arthrobacter chlorophenolicus A6... 36 0.57
CP000875_828(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 35 0.97
CP000713_159(CP000713|pid:none) Psychrobacter sp. PRwf-1, comple... 35 0.97
CP000479_407(CP000479|pid:none) Mycobacterium avium 104, complet... 35 0.97
CP000656_1022(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 35 0.97
CP000158_1062(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 35 1.3
CP001068_93(CP001068|pid:none) Ralstonia pickettii 12J chromosom... 34 2.8
CP001644_101(CP001644|pid:none) Ralstonia pickettii 12D chromoso... 34 2.8
GU474917_24(GU474917|pid:none) Uncultured delta proteobacterium ... 33 3.7
CP001628_1547(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 33 6.3
CP000511_5710(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 33 6.3
CP001769_6230(CP001769|pid:none) Spirosoma linguale DSM 74, comp... 33 6.3
CU928176_37(CU928176|pid:none) Zygosaccharomyces rouxii strain C... 33 6.3
(Q6FSI6) RecName: Full=Protein transport protein SEC23-2; &CR38... 33 6.3
CP000431_3521(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 33 6.3
CP001666_2315(CP001666|pid:none) Clostridium ljungdahlii DSM 135... 33 6.3
AP009384_557(AP009384|pid:none) Azorhizobium caulinodans ORS 571... 32 8.2
>(Q75J93) RecName: Full=Circularly permutated Ras protein 1;
Short=DdiCPRas1; &AC117267_2(AC117267|pid:none)
Length = 842
Score = 245 bits (626), Expect(2) = 5e-65
Identities = 128/128 (100%), Positives = 128/128 (100%)
Frame = -1
Query: 384 ASSGPSYISRLECVQSSIPTMIDRLSIQYPNKRVVLVTFSDEVMIYTQSNSVDGPIVIAG 205
ASSGPSYISRLECVQSSIPTMIDRLSIQYPNKRVVLVTFSDEVMIYTQSNSVDGPIVIAG
Sbjct: 411 ASSGPSYISRLECVQSSIPTMIDRLSIQYPNKRVVLVTFSDEVMIYTQSNSVDGPIVIAG 470
Query: 204 DKLEDFDQLIEIGRSMTYDKLPTASGSSDFLKAKIKSLEPVQSTALGPALLVSAAIASQK 25
DKLEDFDQLIEIGRSMTYDKLPTASGSSDFLKAKIKSLEPVQSTALGPALLVSAAIASQK
Sbjct: 471 DKLEDFDQLIEIGRSMTYDKLPTASGSSDFLKAKIKSLEPVQSTALGPALLVSAAIASQK 530
Query: 24 MLSEVVIC 1
MLSEVVIC
Sbjct: 531 MLSEVVIC 538
Score = 25.4 bits (54), Expect(2) = 5e-65
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2
Query: 431 PSLQSEWVNA 402
PSLQSEWVNA
Sbjct: 395 PSLQSEWVNA 404
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5032459
Number of Hits to DB: 948,330,192
Number of extensions: 16881056
Number of successful extensions: 29917
Number of sequences better than 10.0: 20
Number of HSP's gapped: 29905
Number of HSP's successfully gapped: 21
Length of query: 144
Length of database: 1,626,962,036
Length adjustment: 107
Effective length of query: 37
Effective length of database: 1,088,488,923
Effective search space: 40274090151
Effective search space used: 40274090151
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
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