Homology FC-IC1129 vs Protein
Query= FC-IC1129 (FC-IC1129Q) /CSM/FC-IC/FC-IC1129Q.Seq.d/
(1300 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36202_1(L36202|pid:none) Dictyostelium discoideum fimbrin (fimA... 235 e-104
(P54680) RecName: Full=Fimbrin; 235 e-104
CP003005_878(CP003005|pid:none) Myceliophthora thermophila ATCC ... 142 3e-54
CP000294_171(CP000294|pid:none) Cryptococcus gattii WM276 chromo... 148 8e-54
FP929139_1189(FP929139|pid:none) Leptosphaeria maculans JN3 lm_S... 142 2e-53
CU928176_273(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 142 3e-53
BT100061_1(BT100061|pid:none) Drosophila melanogaster RE03506 fu... 132 5e-53
AE014298_2917(AE014298|pid:none) Drosophila melanogaster chromos... 132 5e-53
FQ857333_22(FQ857333|pid:none) Piriformospora indica PIRI_contig... 145 7e-53
JI167826_1(JI167826|pid:none) TSA: Ascaris suum ASCF_2841_2376 m... 142 7e-53
FM992693_272(FM992693|pid:none) Candida dubliniensis CD36 chromo... 141 1e-52
AM920428_548(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 142 1e-52
CP000500_377(CP000500|pid:none) Scheffersomyces stipitis CBS 605... 140 2e-52
CR380948_81(CR380948|pid:none) Candida glabrata strain CBS138 ch... 137 4e-52
FQ311438_69(FQ311438|pid:none) Sporisorium reilianum SRZ2 chromo... 145 7e-52
HE605202_7(HE605202|pid:none) Candida parapsilosis strain CDC317... 137 1e-51
CR382137_836(CR382137|pid:none) Debaryomyces hansenii strain CBS... 144 2e-51
AE016820_444(AE016820|pid:none) Ashbya gossypii ATCC 10895 chrom... 141 6e-51
AM600681_1(AM600681|pid:none) Oncorhynchus mykiss partial mRNA f... 134 6e-51
(A7E3Q8) RecName: Full=Plastin-3; AltName: Full=T-plastin; &BT0... 126 1e-50
(O88818) RecName: Full=Plastin-3; AltName: Full=T-plastin; &AB0... 126 1e-50
(Q99K51) RecName: Full=Plastin-3; AltName: Full=T-plastin; &AB1... 126 1e-50
AK160501_1(AK160501|pid:none) Mus musculus adult male tongue cDN... 126 1e-50
AY893127_1(AY893127|pid:none) Synthetic construct Homo sapiens c... 126 1e-50
(P13797) RecName: Full=Plastin-3; AltName: Full=T-plastin; &A34... 126 1e-50
AK222801_1(AK222801|pid:none) Homo sapiens mRNA for plastin 3 va... 126 1e-50
(Q63598) RecName: Full=Plastin-3; AltName: Full=T-plastin; 126 1e-50
BC094886_1(BC094886|pid:none) Xenopus tropicalis plastin 3 (T is... 128 1e-50
AL589842_1(AL589842|pid:none) Human DNA sequence from clone RP11... 126 1e-50
S31765(S31765) T-plastin - rat (fragment) &X70706_1(X70706|pid:... 126 1e-50
AK300575_1(AK300575|pid:none) Homo sapiens cDNA FLJ50683 complet... 126 1e-50
M22299_1(M22299|pid:none) Human T-plastin polypeptide mRNA, comp... 126 1e-50
CR859218_1(CR859218|pid:none) Pongo abelii mRNA; cDNA DKFZp459D0... 126 1e-50
FM200069_1(FM200069|pid:none) Histomonas meleagridis partial mRN... 135 2e-50
BC061655_1(BC061655|pid:none) Xenopus laevis hypothetical protei... 127 3e-50
(Q6P698) RecName: Full=Plastin-2; AltName: Full=L-plastin; AltNa... 131 3e-50
(Q3V0K9) RecName: Full=Plastin-1; &AK133070_1(AK133070|pid:none... 127 4e-50
AJ720945_1(AJ720945|pid:none) Gallus gallus mRNA for hypothetica... 127 4e-50
BC167378_1(BC167378|pid:none) Xenopus tropicalis hypothetical pr... 125 5e-50
BC031083_1(BC031083|pid:none) Homo sapiens plastin 1 (I isoform)... 126 6e-50
(Q14651) RecName: Full=Plastin-1; AltName: Full=Intestine-specif... 126 6e-50
AK290316_1(AK290316|pid:none) Homo sapiens cDNA FLJ78068 complet... 126 6e-50
CR858800_1(CR858800|pid:none) Pongo abelii mRNA; cDNA DKFZp459F2... 126 6e-50
(P19179) RecName: Full=Plastin-1; AltName: Full=Fimbrin; &A3709... 124 8e-50
FN392320_674(FN392320|pid:none) Pichia pastoris GS115 chromosome... 140 1e-49
(O59945) RecName: Full=Fimbrin; &AF053722_1(AF053722|pid:none) ... 137 4e-49
(A6H742) RecName: Full=Plastin-1; &BC146105_1(BC146105|pid:none) 121 1e-48
BC089653_1(BC089653|pid:none) Xenopus tropicalis MGC107867 prote... 130 2e-48
BC105483_1(BC105483|pid:none) Bos taurus plastin 3 (T isoform), ... 119 3e-48
BC076470_1(BC076470|pid:none) Danio rerio plastin 3 (T isoform),... 127 3e-48
AK030996_1(AK030996|pid:none) Mus musculus adult male thymus cDN... 126 3e-48
AK151542_1(AK151542|pid:none) Mus musculus bone marrow macrophag... 126 3e-48
(Q61233) RecName: Full=Plastin-2; AltName: Full=65 kDa macrophag... 126 3e-48
AJ719624_1(AJ719624|pid:none) Gallus gallus mRNA for hypothetica... 125 3e-48
CU633455_30(CU633455|pid:none) Podospora anserina S mat+ genomic... 123 8e-44
BC008588_1(BC008588|pid:none) Homo sapiens, Similar to plastin 3... 106 8e-44
BC063742_1(BC063742|pid:none) Danio rerio plastin 1 (I isoform),... 111 1e-43
BT064193_1(BT064193|pid:none) Zea mays full-length cDNA clone ZM... 118 4e-41
AK374831_1(AK374831|pid:none) Hordeum vulgare subsp. vulgare mRN... 115 1e-40
AP004040_3(AP004040|pid:none) Oryza sativa Japonica Group genomi... 115 2e-40
AP003202_3(AP003202|pid:none) Oryza sativa Japonica Group genomi... 115 2e-40
FN326663_1(FN326663|pid:none) Schistosoma japonicum isolate Anhu... 117 2e-40
A84461(A84461) probable fimbrin [imported] - Arabidopsis thalian... 110 2e-40
L33405_1(L33405|pid:none) Schistosoma mansoni fimbrin (FM) mRNA,... 114 3e-39
T06799(T06799) fimbrin/plastin-like protein - wheat (fragment) ... 112 4e-39
(Q9FKI0) RecName: Full=Fimbrin-like protein 2; &AB011485_5(AB01... 107 8e-38
U66424_1(U66424|pid:none) Arabidopsis thaliana fimbrin-like prot... 115 2e-37
AK316790_1(AK316790|pid:none) Arabidopsis thaliana AT4G26700 mRN... 115 2e-37
AK318682_1(AK318682|pid:none) Arabidopsis thaliana AT4G26700 mRN... 115 2e-37
AF042668_1(AF042668|pid:none) Arabidopsis thaliana fimbrin 1 mRN... 115 2e-37
(Q9FJ70) RecName: Full=Putative fimbrin-like protein 3; &AB0154... 114 2e-36
AP005643_13(AP005643|pid:none) Oryza sativa Japonica Group genom... 101 2e-36
AB020745_9(AB020745|pid:none) Arabidopsis thaliana genomic DNA, ... 110 2e-36
U77673_1(U77673|pid:none) Arabidopsis thaliana fimbrin-like prot... 110 2e-36
HE601627_773(HE601627|pid:none) Schistosoma mansoni strain Puert... 100 6e-35
AM459664_1(AM459664|pid:none) Vitis vinifera contig VV78X045040.... 96 4e-33
HM472995_1(HM472995|pid:none) Drosophila pseudoobscura strain MV... 129 1e-31
FN429929_1(FN429929|pid:none) Salmo salar partial mRNA for L-pla... 129 3e-28
AB179173_1(AB179173|pid:none) Macaca fascicularis testis cDNA cl... 96 3e-28
AC024742_1(AC024742|pid:none) Caenorhabditis elegans cosmid Y104... 94 6e-27
AK376524_1(AK376524|pid:none) Hordeum vulgare subsp. vulgare mRN... 78 2e-25
AK030875_1(AK030875|pid:none) Mus musculus adult male thymus cDN... 105 2e-24
AK294385_1(AK294385|pid:none) Homo sapiens cDNA FLJ61108 complet... 104 1e-20
AK009211_1(AK009211|pid:none) Mus musculus adult male tongue cDN... 89 6e-16
AL137141_3(AL137141|pid:none) Human DNA sequence from clone RP11... 57 2e-06
AK298501_1(AK298501|pid:none) Homo sapiens cDNA FLJ50605 complet... 50 3e-04
FR824143_27(FR824143|pid:none) Albugo laibachii Nc14, genomic co... 47 0.002
JI164342_1(JI164342|pid:none) TSA: Ascaris suum ASCF_378_5223 mR... 42 0.077
FQ857333_23(FQ857333|pid:none) Piriformospora indica PIRI_contig... 39 0.65
CP003004_312(CP003004|pid:none) Myceliophthora thermophila ATCC ... 33 3.3
CP003012_907(CP003012|pid:none) Thielavia terrestris NRRL 8126 c... 33 6.9
CP000288_637(CP000288|pid:none) Cryptococcus gattii WM276 chromo... 35 7.2
A63605_1(A63605|pid:none) Sequence 7 from Patent WO9722696. 35 7.2
AY183142_1(AY183142|pid:none) Homo sapiens spectrin-like protein... 35 7.2
AK134424_1(AK134424|pid:none) Mus musculus 13 days embryo male t... 35 7.2
EU293093_1(EU293093|pid:none) Synthetic construct murine micro u... 35 7.2
CR382135_291(CR382135|pid:none) Debaryomyces hansenii strain CBS... 35 7.2
AL049548_2(AL049548|pid:none) Human DNA sequence from clone RP3-... 35 7.2
AK049602_1(AK049602|pid:none) Mus musculus 12 days embryo spinal... 35 7.2
BC050183_1(BC050183|pid:none) Mus musculus utrophin, mRNA (cDNA ... 35 7.2
AY095485_1(AY095485|pid:none) Canis familiaris utrophin mRNA, co... 35 9.4
AJ002967_1(AJ002967|pid:none) Rattus norvegicus mRNA for utrophin. 35 9.4
>L36202_1(L36202|pid:none) Dictyostelium discoideum fimbrin (fimA)
mRNA, complete cds.
Length = 610
Score = 235 bits (599), Expect(2) = e-104
Identities = 117/123 (95%), Positives = 117/123 (95%)
Frame = -3
Query: 629 SKKAIGCNVVNIGAGDLVEGRAHLIMGLTWXIXKXGLFARIXLTNHPELYRLLHDGETIE 450
S KAIGCNVVNIGAGDLVEGRAHLIMGLTW I K GLFARI LTNHPELYRLLHDGETIE
Sbjct: 196 SAKAIGCNVVNIGAGDLVEGRAHLIMGLTWQIIKIGLFARINLTNHPELYRLLHDGETIE 255
Query: 449 DLLKLPVEEILLRWFNYHLAAAGSQRRVKNFSGDIKDSECYTILLKQIAPKDAGVETXAL 270
DLLKLPVEEILLRWFNYHLAAAGSQRRVKNFSGDIKDSECYTILLKQIAPKDAGVET AL
Sbjct: 256 DLLKLPVEEILLRWFNYHLAAAGSQRRVKNFSGDIKDSECYTILLKQIAPKDAGVETSAL 315
Query: 269 NIS 261
NIS
Sbjct: 316 NIS 318
Score = 169 bits (429), Expect(2) = e-104
Identities = 82/88 (93%), Positives = 84/88 (95%)
Frame = -2
Query: 264 LTXLDQRAVKVLENADKLGCKKFLKPKDIVTGFQKLNLAFXANLFNTHPALEPVEDVVXI 85
++ LDQRAVKVLENADKLGCKKFLKPKDIVTGFQKLNLAF ANLFNTHPALEPVEDVV I
Sbjct: 317 ISNLDQRAVKVLENADKLGCKKFLKPKDIVTGFQKLNLAFVANLFNTHPALEPVEDVVII 376
Query: 84 EETREXKTFRNWMNSLGVDPFVNNLYEG 1
EETRE KTFRNWMNSLGVDPFVNNLYEG
Sbjct: 377 EETREEKTFRNWMNSLGVDPFVNNLYEG 404
Score = 197 bits (500), Expect(3) = 1e-73
Identities = 98/105 (93%), Positives = 99/105 (94%)
Frame = -2
Query: 942 GVETSALNISNLDQRAVKVLENADKLGCKKFLKPKDIVTGFQKLNLAFVANLFNTHPALE 763
GVETSALNISNLDQRAVKVLENADKLGCKKFLKPKDIVTGFQKLNLAFVANLFNTHPALE
Sbjct: 309 GVETSALNISNLDQRAVKVLENADKLGCKKFLKPKDIVTGFQKLNLAFVANLFNTHPALE 368
Query: 762 PVEDVVIIEETREEKTFRNWMNSLXVDPFVNNLYEGXXXXFVLIQ 628
PVEDVVIIEETREEKTFRNWMNSL VDPFVNNLYEG +LIQ
Sbjct: 369 PVEDVVIIEETREEKTFRNWMNSLGVDPFVNNLYEGTYDGLILIQ 413
Score = 75.1 bits (183), Expect(3) = 1e-73
Identities = 46/97 (47%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Frame = -3
Query: 1292 LSSAXALGXXVVHIXCXXTX---AWVEXXXLWXXHGXXXRLVLFXRINXTDXSXPXRLXH 1122
++SA A+G VV+I A + W ++ LF RIN T+ RL H
Sbjct: 194 INSAKAIGCNVVNIGAGDLVEGRAHLIMGLTWQI----IKIGLFARINLTNHPELYRLLH 249
Query: 1121 DGQTXEXYLKLXXEEILLRWFNYHLAAAGSQXXVKEF 1011
DG+T E LKL EEILLRWFNYHLAAAGSQ VK F
Sbjct: 250 DGETIEDLLKLPVEEILLRWFNYHLAAAGSQRRVKNF 286
Score = 52.0 bits (123), Expect(3) = 1e-73
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 1018 RNFSGDIKDSEXYTILLKQIAPKDAG 941
+NFSGDIKDSE YTILLKQIAPKDAG
Sbjct: 284 KNFSGDIKDSECYTILLKQIAPKDAG 309
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,847,782,711
Number of extensions: 51550040
Number of successful extensions: 85640
Number of sequences better than 10.0: 102
Number of HSP's gapped: 85433
Number of HSP's successfully gapped: 470
Length of query: 433
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 298
Effective length of database: 1,010,438,449
Effective search space: 301110657802
Effective search space used: 301110657802
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home