Dictyostelium discoideum cDNA Clone FC-IC1129

Sequence FC-IC1129

ACCTTCGTAG AGATTGTTAA CGAATGGATC TACACCTAAA GAATTCATCC
AATTACGGAA AGTCTTTTNT TCACGAGTCT CTTCAATTNT AACAACATCT
TCAACTGGTT CCAATGCTGG ATGAGTATTG AAAAGATTGG CANCGAATGC
TAAATTAAGT TTTTGGAAAC CAGTTACGAT ATCCTTTGGT TTAAGGAACT
TCTTACAACC TAATTTATCG GCATTCTCTA AAACTTTAAC AGCACGTTGA
TCTAAGNTTG TGAGATATTC AAAGCANAGG TTTCNACACC AGCATCCTTT
GGTGCGATTT GTTTCAAAAG GATTGTATAA CATTCTGAAT CTTTAATATC
ACCAGAGAAA TTCTTTACTC TTCTTTGTGA GCCAGCAGCG GCTAAATGAT
AATTGAACCA TCTCAATAAG ATCTCTTCAA CTGGAAGTTT CAATAAATCT
TCAATTGTTT CACCATCATG TAAAAGACGA TACAACTCTG GATGATTAGT
TAAATNAATA CGTGCGAATA AACCANTCTT NATAATTNGC CATGTTAAAC
CCATAATTAA ATGAGCTCTA CCTTCAACTA AATCACCTGC NCCAATATTA
ACAACATTAC AACCAATTGC TTTTTTGCTG AATTAATACA AAGT------
----ACCTTC GTAGAGATTG TTAACGAATG GATCTACACN TAAAGAATTC
ATCCAATTAC GGAAAGTCTT TTCTTCACGA GTCTCTTCAA TTATAACAAC
ATCTTCAACT GGTTCCAATG CTGGATGAGT ATTGAAAAGA TTGGCAACGA
ATGCTAAATT AAGTTTTTGG AAACCAGTTA CGATATCCTT TGGTTTAAGG
AACTTCTTAC AACCTAATTT ATCGGCATTC TCTAAAACTT TAACAGCACG
TTGATCTAAA TTTGAGATAT TCAAAGCAGA GGTTTCGACA CCCAGCATCC
TTTGGTGCGA TTTGTTTCAA AAGGATTGTA TANCATTCTG AATCTTTAAT
ATCACCAGAG AAATTCCTTT ACTNTTNTTT GTGAGCCAGC AGCGGCTAAA
TGATAATTGA ACCATCTCAA TAAGATCTCT TCANNTGNAA GTTTCAAATA
ATNTTCNATN GTTTGNCCAT CATGTNNNAG ACGANTCGGC NGTGAANGAT
CAGTTANATT AATACGTNTG AATAAGACCA ATCTCNATAN NTTNCCATGT
NNANCCCATA ATTNNATGNG CTCAACCCAC GCANTGGTNC ACNTGCANCN
GATATGCACA ACATNNCAAC CAAGTGCNTA TGCTGAACTT AATACAANGT

Translated Amino Acid Sequence FC-IC1129

lrrdc*rmdlhlknssnygksfxheslqx*qhlqlvpmldey*kdwxrmln*vfgnqlry
plv*gtsynliyrhslkl*qhvdlxl*diqsxgfxtsilwcdlfqkdcitf*ifnitrei
lyssl*assg*miiepsq*dlfnwkfq*ifncftim*ktiqlwmis*xntce*txlxnxp
c*thn*msstfn*ITCXNINNITTNCFFAELIQS---

---TFVEIVNEWIYT*rihpiteslfftslfnynnifnwfqcwmsiekignec*ikflet
sydilwfkelltt*figil*nfnstli*i*diqsrgfdtqhplvrfvskglyxilnl*yh
qrnsftxxcepaaak**lnhlnkissxxsfk*xsxvxpscxrrxgxexsvxlirxnktnl
xxxpcxxhnxmxsthaxvhxxxicttxqpsayaelntx

Homology FC-IC1129 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-IC1129 (FC-IC1129Q) /CSM/FC-IC/FC-IC1129Q.Seq.d/                  2226   0.0
FC-IC1414 (FC-IC1414Q) /CSM/FC-IC/FC-IC1414Q.Seq.d/                  1160   0.0
FC-IC1251 (FC-IC1251Q) /CSM/FC-IC/FC-IC1251Q.Seq.d/                  1160   0.0
FC-IC1223 (FC-IC1223Q) /CSM/FC-IC/FC-IC1223Q.Seq.d/                  1160   0.0
FC-IC0832 (FC-IC0832Q) /CSM/FC-IC/FC-IC0832Q.Seq.d/                  1146   0.0
FC-IC0464 (FC-IC0464Q) /CSM/FC-IC/FC-IC0464Q.Seq.d/                   957   0.0
CFK412 (CFK412Q) /CSM/CF/CFK4-A/CFK412Q.Seq.d/                        955   0.0
FC-IC0571 (FC-IC0571Q) /CSM/FC-IC/FC-IC0571Q.Seq.d/                   942   0.0
VFA420 (VFA420Q) /CSM/VF/VFA4-A/VFA420Q.Seq.d/                        892   0.0
FC-IC1252 (FC-IC1252Q) /CSM/FC-IC/FC-IC1252Q.Seq.d/                   329   6e-89

Homology FC-IC1129 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


L36202|L36202.1 Dictyostelium discoideum fimbrin (fimA) mRNA...   680   0.0    3
BX567934|BX567934.1 Glossina morsitans morsitans (Tseatse fl...    54   0.005  1
BM058495|BM058495.1 2193-02 hindgut and Malpighian tubule su...    50   0.014  2
BE239048|BE239048.1 MD0704 Meloidogyne incognita J2 (#MD99-1...    52   0.020  1
CB143721|CB143721.1 K-EST0197822 L16HLK3 Homo sapiens cDNA c...    38   0.069  3
AA226818|AA226818.1 zr20a04.r1 Stratagene NT2 neuronal precu...    38   0.094  3
BF724876|BF724876.1 bx09f12.y1 Human Iris cDNA (Un-normalize...    38   0.14   3
BE867815|BE867815.1 601443781F1 NIH_MGC_65 Homo sapiens cDNA...    38   0.14   3
AU127916|AU127916.1 Homo sapiens cDNA clone:NT2RP2002345, 5'...    38   0.16   3
BE541512|BE541512.1 601067970F1 NIH_MGC_10 Homo sapiens cDNA...    38   0.16   3

Homology FC-IC1129 vs Protein

Sequences producing significant alignments:                      (bits) Value


L36202_1(L36202|pid:none) Dictyostelium discoideum fimbrin (fimA...   235   e-104
(P54680) RecName: Full=Fimbrin;                                       235   e-104
CP003005_878(CP003005|pid:none) Myceliophthora thermophila ATCC ...   142   3e-54
CP000294_171(CP000294|pid:none) Cryptococcus gattii WM276 chromo...   148   8e-54
FP929139_1189(FP929139|pid:none) Leptosphaeria maculans JN3 lm_S...   142   2e-53
CU928176_273(CU928176|pid:none) Zygosaccharomyces rouxii strain ...   142   3e-53
BT100061_1(BT100061|pid:none) Drosophila melanogaster RE03506 fu...   132   5e-53
AE014298_2917(AE014298|pid:none) Drosophila melanogaster chromos...   132   5e-53
FQ857333_22(FQ857333|pid:none) Piriformospora indica PIRI_contig...   145   7e-53
JI167826_1(JI167826|pid:none) TSA: Ascaris suum ASCF_2841_2376 m...   142   7e-53

Homology FC-IC1129 vs Genome