Homology FC-IC0983 vs Protein

Query= FC-IC0983 (FC-IC0983Q) /CSM/FC-IC/FC-IC0983Q.Seq.d/
         (466 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54671) RecName: Full=Histone H1;  &L33457_1(L33457|pid:none) &...    50   3e-05
CR933357_1(CR933357|pid:none) Mini antigen, Paramecium tetraurel...    35   1.0

>(P54671) RecName: Full=Histone H1;  &L33457_1(L33457|pid:none)
           &U50904_1(U50904|pid:none)
          Length = 180

 Score = 50.4 bits (119), Expect = 3e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -1

Query: 466 TLTMVKASYKLSEEGKKEHQATLG 395
           TLTMVKASYKLSEEGKKEHQATLG
Sbjct: 80  TLTMVKASYKLSEEGKKEHQATLG 103

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 724,292,822
Number of extensions: 9894396
Number of successful extensions: 25529
Number of sequences better than 10.0: 2
Number of HSP's gapped: 25525
Number of HSP's successfully gapped: 2
Length of query: 155
Length of database: 1,732,582,204
Length adjustment: 116
Effective length of query: 39
Effective length of database: 1,112,073,496
Effective search space: 43370866344
Effective search space used: 43370866344
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)




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