Homology FC-IC0983 vs DNA
Query= FC-IC0983 (FC-IC0983Q) /CSM/FC-IC/FC-IC0983Q.Seq.d/
/CSM/FC-IC/FC-IC0983Q.Seq.d/
(466 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss8.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/b/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/b/new_est_cele1.seq; est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/b/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
31,962,192 sequences; U,222,775,761 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value N
U50904|U50904.2 Dictyostelium discoideum histone H1 mRNA, co... 650 0.0 4
L33457|L33457.1 Dictyostelium discoideum (clone pBSK/HMG/ECO... 642 e-180 1
AF002682|AF002682.1 Chironomus thummi thummi histone H1-II-2... 34 0.020 3
CD825003|CD825003.1 BN25.059G24F011129 BN25 Brassica napus c... 38 0.57 2
AF002683|AF002683.1 Chironomus tentans histone H1d gene, com... 32 0.71 3
L29104|L29104.1 Glyptotendipes salinus histone H1-I gene, co... 36 0.72 2
AU283019|AU283019.1 Molgula tectiformis mRNA, clone:MT02A1F0... 34 1.3 2
AU283006|AU283006.1 Molgula tectiformis mRNA, clone:MT02A1D1... 34 1.3 2
AL133512|AL133512.10 Human DNA sequence from clone RP13-131O... 44 1.4 5
AU282991|AU282991.1 Molgula tectiformis mRNA, clone:MT02A1B1... 34 1.4 2
BQ916628|BQ916628.1 QHB18I07.yg.ab1 QH_ABCDI sunflower RHA80... 30 1.4 3
AQ502452|AQ502452.1 V46B6 mTn-3xHA/lacZ Insertion Library Sa... 38 1.6 2
AC026822|AC026822.2 Homo sapiens chromosome 9 clone RP11-164... 44 1.7 1
AU281017|AU281017.1 Molgula tectiformis mRNA, clone:MT17A2B0... 44 1.7 1
AC087766|AC087766.1 Homo sapiens chromosome 8 clone CTC-533G... 44 1.7 1
AC006032|AC006032.2 Homo sapiens BAC clone RP11-115E20 from ... 44 1.7 1
AK108809|AK108809.1 Oryza sativa (japonica cultivar-group) c... 36 2.0 2
AQ873683|AQ873683.1 V73G1 mTn-3xHA/lacZ Insertion Library, s... 38 2.3 2
AX073252|AX073252.1 Sequence 363 from Patent WO0102550. 32 4.1 2
AC010353|AC010353.3 Homo sapiens chromosome 8 clone CTD-2022... 40 4.3 4
AC095532|AC095532.8 Rattus norvegicus 18 BAC CH230-8E4 (Chil... 36 5.1 6
AB016872|AB016872.1 Arabidopsis thaliana genomic DNA, chromo... 32 5.2 5
AC018460|AC018460.2 Arabidopsis thaliana chromosome I BAC F1... 36 5.2 3
AE016750|AE016750.1 Staphylococcus epidermidis ATCC 12228, s... 32 6.1 8
CK545024|CK545024.1 rswhb0_015482.y1 swh Bombyx mori cDNA, m... 36 6.1 2
CK540403|CK540403.1 rswhb0_003965.y1 swh Bombyx mori cDNA, m... 36 6.3 2
AF215842|AF215842.2 Homo sapiens chromosome 8 clone XX-CTA38... 32 6.4 5
CD152453|CD152453.1 ML1-0029T-M147-G09-U.B ML1-0029 Schistos... 38 6.4 2
CK490712|CK490712.1 rswab0_009010.y1 swa Bombyx mori cDNA, m... 36 6.6 2
AU288465|AU288465.1 Zinnia elegans cDNA, clone:Z2884, primer... 42 6.8 1
AU306736|AU306736.1 Zinnia elegans cDNA, clone:Z16367. 42 6.8 1
AE016960|AE016960.1 Coxiella burnetii strain RSA 493, sectio... 42 6.8 1
CF602723|CF602723.1 EST3796 Zea mays sperm cell cDNA library... 42 6.8 1
AV113032|AV113032.1 Mus musculus 10-day embryo cDNA, partial... 42 6.8 1
CF602722|CF602722.1 EST3795 Zea mays sperm cell cDNA library... 42 6.8 1
BW293018|BW293018.1 Ciona intestinalis cDNA, clone:cigd049e2... 42 6.8 1
BP023740|BP023740.1 Ciona intestinalis cDNA, clone:cits41h16... 42 6.8 1
AK116620|AK116620.1 Ciona intestinalis cDNA, clone:cits041h1... 42 6.8 1
AW738029|AW738029.1 EST339456 tomato flower buds, anthesis, ... 36 6.9 2
CK542636|CK542636.1 rswhb0_008283.y1 swh Bombyx mori cDNA, m... 36 7.1 2
CK484911|CK484911.1 rswab0_000712.y1 swa Bombyx mori cDNA, m... 36 7.2 2
AW738103|AW738103.1 EST339530 tomato flower buds, anthesis, ... 36 7.2 2
CK489422|CK489422.1 rswab0_007192.y1 swa Bombyx mori cDNA, m... 36 7.4 2
CK511422|CK511422.1 rswdd0_007627.y1 swd Bombyx mori cDNA, m... 36 7.5 2
AW738104|AW738104.1 EST339531 tomato flower buds, anthesis, ... 36 7.7 2
AP006573|AP006573.1 Gloeobacter violaceus PCC 7421 DNA, comp... 34 7.9 3
CK468804|CK468804.1 Bm-178 Posterior silk gland Bombyx mori ... 36 8.7 2
BD241809|BD241809.1 Screening methods. 38 8.7 2
BZ392821|BZ392821.1 EINAQ07TF EI_10_12_KB Entamoeba invadens... 32 9.1 2
AX537112|AX537112.1 Sequence 713 from Patent WO02064766. 38 9.9 2
>U50904|U50904.2 Dictyostelium discoideum histone H1 mRNA, complete
cds.
Length = 865
Score = 650 bits (328), Expect(4) = 0.0
Identities = 328/328 (100%)
Strand = Plus / Minus
Query: 139 tacactattaaaaacaaatcacctattttttggcagcgactttcttacttggagcttttt 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tacactattaaaaacaaatcacctattttttggcagcgactttcttacttggagcttttt 673
Query: 199 tagcagctggcttcttactaactgctttggttactttagcagagttctttttagcagcgg 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tagcagctggcttcttactaactgctttggttactttagcagagttctttttagcagcgg 613
Query: 259 cagttttggttgaggttgaagcagctttagcagctggtttctttggtgcagcttttttgg 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cagttttggttgaggttgaagcagctttagcagctggtttctttggtgcagcttttttgg 553
Query: 319 ttggagtagctggtggagcggcagttgtttcagttgaagtagcggtagtcttggcttttg 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttggagtagctggtggagcggcagttgtttcagttgaagtagcggtagtcttggcttttg 493
Query: 379 gtttctttgcaactggaccaagagtggcttggtgttcctttttaccttcttctgataatt 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtttctttgcaactggaccaagagtggcttggtgttcctttttaccttcttctgataatt 433
Query: 439 tgtaactggctttgaccattgtaagagt 466
||||||||||||||||||||||||||||
Sbjct: 432 tgtaactggctttgaccattgtaagagt 405
Score = 56.0 bits (28), Expect(4) = 0.0
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 102 ttgaatataaatgaagatggatggagag 129
||||||||||||||||||||||||||||
Sbjct: 770 ttgaatataaatgaagatggatggagag 743
Score = 44.1 bits (22), Expect(4) = 0.0
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 cccaattataataaatacaaat 75
||||||||||||||||||||||
Sbjct: 817 cccaattataataaatacaaat 796
Score = 36.2 bits (18), Expect(4) = 0.0
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 83 ctttttacagtttgataa 100
||||||||||||||||||
Sbjct: 788 ctttttacagtttgataa 771
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 10,953,367
Number of Sequences: 31962192
Number of extensions: 10953367
Number of successful extensions: 893530
Number of sequences better than 10.0: 101
length of query: 466
length of database: U,222,775,761
effective HSP length: 22
effective length of query: 444
effective length of database: T,519,607,537
effective search space: 16214705746428
effective search space used: 16214705746428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home