Dictyostelium discoideum cDNA Clone FC-IC0976

Sequence FC-IC0976

CAACAAGTTG AAATTGCTTT AGAGAATGAA AGACTTTATC TTCAAGAAGT
TGAAGATGTT CCAGAGAGAC TATACGAAGA AATTCATAAT TCCAATTTGA
ATAAAGCAGT TCAAGAGGCT GAAGAAATTG AAAGACAACT TATACGAAAA
AAAAATTAAA AAGAATCTTA TCATTATTGT TTCGTATAGG TGGAAAAATT
TATAGAAAAA AAATAAAAAA GAAAAAAATA AATTTAAAAA AACAGCAAGA
ACCTTTTACA CAGAATTTAA CATTACATCG ATTATTTCGA AAGTTTTATT
TAAATTTAAA ATTAAAACAA TTTAAATTAT TATATAAGAA ATATAAAGGA
AATGAAAAAG TAATAATACA ACAATTAGAA AAAAGAGTAG ATATGGTATT
ATTACGAAGT GGTTTTGTAA GAAGTCTGTA TGAAGCGAGA CAAATAATAA
ATCATAAACA TCTTTTAGTG AATGGAAAAA TCGCAAGCTT ACCTGGATAT
ATGATAAATG TAGGTGATAT TATTAGTTTT AAAGAAGGGA GCATGAAAAG
GAAAACTTTT AAAAAGATTA AAAAAAGGAT TAATATCTAA AAAGTCAAGA
AAAAGATGGA CAAACCGAAA CTTTAAATTT AAGCCGATTT CAAAATTNCA
AAAAAAAAAA AAAAAAAAAA AAAGCTGGTC CCTGCCC--- -------AGT
TTTAAAGAAG GGAGCATGAA AAGGAAAACT TTTAAAAAGA TTAAAAAAAG
GATTAATATC TAAAAAGTCA AGAAAAAGAT GGACAAACCG AAACTTTAAA
TTTAAGCCGA TTTCAAAATT NCAAAAAAAA AAAAAAAAAA AAAAAAGCTG
G

Translated Amino Acid Sequence FC-IC0976

qqveialenerlylqevedvperlyeeihnsnlnkavqeaeeierqlirkkn*kesyhyc
fv*vekfiekk*krkk*i*knsknllhri*hyidyfesfi*i*n*nnlnyyirnikemkk
**ynn*kke*iwyyyevvl*evcmkrdk**iinif**meksqayldi**m*villvlkkg
a*KGKLLKRLKKGLISKKSRKRWTNRNFKFKPISKXQKKKKKKKSWSLP---

---SFKEGSMKRKTFKKIKKRINI*kvkkkmdkpkl*i*adfkixkkkkkkkkl

Homology FC-IC0976 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSA843 (VSA843Q) /CSM/VS/VSA8-B/VSA843Q.Seq.d/                        351   1e-95
VSA516 (VSA516Q) /CSM/VS/VSA5-A/VSA516Q.Seq.d/                        351   1e-95
VSA486 (VSA486Q) /CSM/VS/VSA4-D/VSA486Q.Seq.d/                        351   1e-95
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/               351   1e-95
FC-IC0976 (FC-IC0976Q) /CSM/FC-IC/FC-IC0976Q.Seq.d/                   351   1e-95
FC-BG02 (FC-BG02Q) /CSM/FC/FC-BG/FC-BG02Q.Seq.d/                      351   1e-95
VSE534 (VSE534Q) /CSM/VS/VSE5-B/VSE534Q.Seq.d/                        349   4e-95
VSE538 (VSE538Q) /CSM/VS/VSE5-B/VSE538Q.Seq.d/                        325   6e-88
VSB284 (VSB284Q) /CSM/VS/VSB2-D/VSB284Q.Seq.d/                        309   4e-83
VSG556 (VSG556Q) /CSM/VS/VSG5-C/VSG556Q.Seq.d/                        295   6e-79

Homology FC-IC0976 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF155828|AF155828.1 Dictyostelium discoideum NADH dehydrogen...   351   e-148  5
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D...   351   e-144  5
U25143|U25143.1 Dictyostelium discoideum cAMP-inducible pres...   260   3e-65  1
AC084193|AC084193.5 Homo sapiens BAC clone RP11-545M11 from ...    42   0.006  6
AC068698|AC068698.2 Homo sapiens chromosome 14 clone RP11-55...    36   0.17   5
AC091318|AC091318.3 Mus musculus clone RP23-436J3, WORKING D...    48   0.20   1
AL672273|AL672273.9 Mouse DNA sequence from clone RP23-15A12...    48   0.20   1
AL391418|AL391418.3 Human DNA sequence *** SEQUENCING CANCEL...    42   0.29   6
AL929108|AL929108.5 Zebrafish DNA sequence from clone CH211-...    36   0.41   2
AI934560|AI934560.1 wp09d08.x1 NCI_CGAP_Kid12 Homo sapiens c...    46   0.78   1

Homology FC-IC0976 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9XPI8) RecName: Full=Ribosomal protein S4, mitochondrial;  &AB...   170   9e-41
(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags...    91   8e-17
CP002171_782(CP002171|pid:none) Thermoanaerobacterium thermosacc...    70   2e-10
FP929062_1640(FP929062|pid:none) Clostridiales sp. SS3/4 draft g...    68   7e-10
FP929037_2763(FP929037|pid:none) Clostridium saccharolyticum-lik...    67   1e-09
(A9KJG7) RecName: Full=30S ribosomal protein S4;  &CP000885_3596...    67   2e-09
CP001867_170(CP001867|pid:none) Geodermatophilus obscurus DSM 43...    66   2e-09
(Q97J08) RecName: Full=Putative 30S ribosomal protein S4 B;  &AE...    66   3e-09
AP011529_1703(AP011529|pid:none) Deferribacter desulfuricans SSM...    66   3e-09
CP002858_489(CP002858|pid:none) Flexistipes sinusarabici DSM 494...    65   3e-09

Homology FC-IC0976 vs Genome