Homology FC-IC0810 vs DNA
Query= FC-IC0810 (FC-IC0810Q) /CSM/FC-IC/FC-IC0810Q.Seq.d/
/CSM/FC-IC/FC-IC0810Q.Seq.d/
(334 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss8.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/b/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/b/new_est_cele1.seq; est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/b/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
31,962,192 sequences; U,222,775,761 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 ma... 383 e-174 2
AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 ma... 58 1e-06 7
BH150549|BH150549.1 ENTPZ36TF Entamoeba histolytica Sheared ... 56 3e-04 1
AZ546860|AZ546860.1 ENTGL84TR Entamoeba histolytica Sheared ... 56 3e-04 1
AX344559|AX344559.1 Sequence 10 from Patent WO0200932. 42 5e-04 10
AZ532902|AZ532902.1 ENTBU58TF Entamoeba histolytica Sheared ... 54 0.001 1
AJ488770|AJ488770.1 Dictyostelium discoideum mRNA for OSBPa ... 54 0.001 1
AC090980|AC090980.5 Homo sapiens chromosome 8, clone RP11-43... 34 0.010 7
AL360020|AL360020.15 Human DNA sequence from clone RP11-490F... 40 0.027 3
AL390250|AL390250.5 Human DNA sequence *** SEQUENCING CANCEL... 38 0.028 5
AC091789|AC091789.5 Homo sapiens BAC clone RP11-496L12 from ... 36 0.037 6
AL844505|AL844505.1 Plasmodium falciparum chromosome 6. 32 0.040 15
AC125014|AC125014.6 Mus musculus chromosome 16 clone RP24-14... 40 0.040 5
BX511163|BX511163.4 Zebrafish DNA sequence *** SEQUENCING IN... 38 0.044 5
AC125924|AC125924.3 Rattus norvegicus clone CH230-11J12, ***... 34 0.045 7
AC139863|AC139863.5 Mus musculus chromosome 14, clone RP23-1... 38 0.055 6
BX005221|BX005221.7 Zebrafish DNA sequence from clone DKEY-6... 32 0.069 4
AC137068|AC137068.2 Mus musculus chromosome UNK clone RP23-2... 36 0.082 7
AC023528|AC023528.4 Homo sapiens clone RP11-25B22, WORKING D... 34 0.10 6
AC129328|AC129328.2 Mus musculus chromosome UNK clone RP23-1... 34 0.11 5
AC021137|AC021137.5 Homo sapiens chromosome 12 clone RP11-41... 32 0.15 9
AL604030|AL604030.3 Human DNA sequence *** SEQUENCING CANCEL... 32 0.18 5
AC004688|AC004688.8 Plasmodium falciparum chromosome 12 clon... 36 0.21 7
AC073427|AC073427.7 Homo sapiens BAC clone RP11-746K19 from ... 46 0.21 4
AC121882|AC121882.3 Mus musculus BAC clone RP24-135M19 from ... 38 0.23 7
AC024176|AC024176.6 Homo sapiens chromosome 11 clone RP11-5O... 32 0.29 5
CE585442|CE585442.1 tigr-gss-dog-17000366337073 Dog Library ... 42 0.30 2
AV866065|AV866065.1 Ciona intestinalis cDNA, clone:rcieg44i1... 46 0.30 1
BW002952|BW002952.1 Ciona intestinalis cDNA, clone:rcibd018h... 46 0.30 1
AC009571|AC009571.3 Homo sapiens chromosome 4 clone RP11-57A... 46 0.30 1
AV907509|AV907509.1 Ciona intestinalis cDNA, clone:rciad69m0... 46 0.30 1
AV895398|AV895398.1 Ciona intestinalis cDNA, clone:rciad41o1... 46 0.30 1
BW162429|BW162429.1 Ciona intestinalis cDNA, clone:rcigd045m... 46 0.30 1
BW031504|BW031504.1 Ciona intestinalis cDNA, clone:cibd018h0... 46 0.30 1
BW028727|BW028727.1 Ciona intestinalis cDNA, clone:cibd010g0... 46 0.30 1
AQ468334|AQ468334.1 HS_5215_B2_H04_T7A RPCI-11 Human Male BA... 46 0.30 1
BW000135|BW000135.1 Ciona intestinalis cDNA, clone:rcibd010g... 46 0.30 1
BW210128|BW210128.1 Ciona intestinalis cDNA, clone:cieg063e1... 46 0.30 1
BW074608|BW074608.1 Ciona intestinalis cDNA, clone:rcieg063e... 46 0.30 1
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, comple... 36 0.31 7
AC118984|AC118984.2 Papio anubis clone RP41-146N22, WORKING ... 34 0.33 5
BS000082|BS000082.1 Pan troglodytes chromosome 22 clone:RP43... 32 0.35 6
AC093504|AC093504.1 Homo sapiens chromosome 16 clone CTC-292... 36 0.36 6
AC114468|AC114468.4 Rattus norvegicus clone CH230-44L6, *** ... 34 0.37 6
AC023753|AC023753.6 Homo sapiens chromosome N/A clone RP11-5... 36 0.38 5
AC016706|AC016706.6 Homo sapiens BAC clone RP11-215D12 from ... 40 0.43 5
AC139344|AC139344.17 Medicago truncatula clone mth2-34b22, c... 36 0.45 5
AC025725|AC025725.1 Caenorhabditis elegans clone Y69A2R, ***... 36 0.45 6
AC084158|AC084158.1 Caenorhabditis elegans cosmid Y69A2AR, c... 36 0.46 6
AC112424|AC112424.4 Rattus norvegicus clone CH230-355J4, WOR... 34 0.49 6
AC119741|AC119741.3 Homo sapiens 3 BAC RP11-570O24 (Roswell ... 32 0.50 5
AL929261|AL929261.26 Zebrafish DNA sequence from clone CH211... 36 0.51 6
AC090797|AC090797.5 Homo sapiens chromosome 8, clone RP11-58... 34 0.51 6
AC015962|AC015962.4 Homo sapiens chromosome 18 clone RP11-11... 36 0.51 6
AC129165|AC129165.5 Rattus norvegicus clone CH230-232B23, **... 36 0.54 7
AC114001|AC114001.5 Mus musculus BAC clone RP23-162H9 from X... 32 0.54 7
AC079327|AC079327.3 Homo sapiens chromosome 18, clone RP11-2... 32 0.54 7
AC124666|AC124666.4 Mus musculus clone RP23-107I15, WORKING ... 38 0.57 6
AL954657|AL954657.13 Zebrafish DNA sequence from clone CH211... 34 0.58 6
AC145867|AC145867.2 Pan troglodytes BAC clone RP43-21B15 fro... 36 0.62 6
AC015873|AC015873.4 Homo sapiens clone RP11-94A1, WORKING DR... 34 0.62 2
AL137001|AL137001.23 Human DNA sequence from clone RP11-301J... 34 0.62 2
AC121279|AC121279.6 Mus musculus chromosome 3 clone RP23-4F1... 40 0.66 6
AL136094|AL136094.13 Human DNA sequence from clone RP3-527B1... 30 0.68 6
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) co... 30 0.69 9
BX005410|BX005410.7 Zebrafish DNA sequence from clone CH211-... 32 0.72 4
AC145462|AC145462.1 Callithrix jacchus clone CH259-157H7, WO... 36 0.75 6
AC115721|AC115721.11 Mus musculus chromosome 3, clone RP23-9... 38 0.75 5
AC106846|AC106846.1 Homo sapiens chromosome 11 clone CTD-225... 36 0.75 3
AC006097|AC006097.1 Homo sapiens chromosome 10 clone CIT987S... 42 0.79 2
AC117220|AC117220.2 Mus musculus chromosome UNK clone RP23-3... 34 0.80 4
BX649325|BX649325.2 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.83 4
AC074183|AC074183.6 Homo sapiens BAC clone RP11-727N2 from 7... 36 0.86 5
BS000060|BS000060.1 Pan troglodytes chromosome 22 clone:RP43... 36 0.87 5
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clon... 32 0.89 10
AL355072|AL355072.3 Human chromosome 14 DNA sequence BAC R-1... 34 0.89 6
AC121043|AC121043.4 Rattus norvegicus clone CH230-121F11, **... 38 0.91 4
AL390197|AL390197.19 Human DNA sequence from clone RP11-190F... 42 0.93 2
AZ528293|AZ528293.1 ENTBS90TF Entamoeba histolytica Sheared ... 32 0.95 3
AE014852|AE014852.2 Plasmodium falciparum 3D7 chromosome 12,... 30 1.0 8
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 30 1.0 9
BW232352|BW232352.1 Ciona intestinalis cDNA, clone:ciad102b2... 40 1.1 2
AC141559|AC141559.2 Mus musculus chromosome UNK clone RP24-3... 36 1.1 5
AX696302|AX696302.1 Sequence 9 from Patent WO02057432. 30 1.1 9
BX901878|BX901878.1 Zebrafish DNA sequence *** SEQUENCING IN... 30 1.2 8
AC132898|AC132898.4 Mus musculus clone RP24-281N15, WORKING ... 44 1.2 1
AL441943|AL441943.6 Human DNA sequence from clone RP11-69C17... 44 1.2 1
AC084104|AC084104.1 Mus musculus clone RP23-199M23, WORKING ... 44 1.2 1
BH156964|BH156964.1 ENTTM39TF Entamoeba histolytica Sheared ... 44 1.2 1
AZ538282|AZ538282.1 ENTFG76TR Entamoeba histolytica Sheared ... 44 1.2 1
CA760971|CA760971.1 BR060009A20D12.ab1 IRRI clones Oryza sat... 44 1.2 1
CA752977|CA752977.1 00200001086.F11_001013184I.scf IR62266 O... 44 1.2 1
AZ669133|AZ669133.1 ENTMU37TF Entamoeba histolytica Sheared ... 44 1.2 1
AZ068824|AZ068824.1 RPCI-23-419K17.TJ RPCI-23 Mus musculus g... 44 1.2 1
AC110901|AC110901.10 Mus musculus chromosome 13 clone RP24-1... 32 1.2 8
AL928579|AL928579.6 Mouse DNA sequence from clone RP23-302M1... 34 1.3 6
AE014829|AE014829.1 Plasmodium falciparum 3D7 chromosome 10 ... 30 1.3 9
AC027109|AC027109.2 Homo sapiens chromosome 14 clone RP11-54... 34 1.3 6
AC021286|AC021286.3 Homo sapiens clone RP11-21H22, WORKING D... 38 1.3 3
BX927256|BX927256.3 Zebrafish DNA sequence *** SEQUENCING IN... 36 1.4 3
>AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 map
4915084-5005461 strain AX4, complete sequence.
Length = 90373
Score = 383 bits (193), Expect(2) = e-174
Identities = 193/193 (100%)
Strand = Plus / Minus
Query: 1 accattaccaacctttatattagaaccaagatcattattggagaaatttacagataatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41090 accattaccaacctttatattagaaccaagatcattattggagaaatttacagataatat 41031
Query: 61 gattcatggtgaaattttatgtaatttatcaaaattagagtcaccaatggatagaatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41030 gattcatggtgaaattttatgtaatttatcaaaattagagtcaccaatggatagaatgca 40971
Query: 121 tttaattacaaaatggtatttatctgcttttcattatagaaagaaaggtttacaaaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40970 tttaattacaaaatggtatttatctgcttttcattatagaaagaaaggtttacaaaaacc 40911
Query: 181 ttataatccaatt 193
|||||||||||||
Sbjct: 40910 ttataatccaatt 40898
Score = 272 bits (137), Expect(2) = e-174
Identities = 140/141 (99%)
Strand = Plus / Minus
Query: 194 ttaggtgaaatttttagaactagatgggaatttaaagaaacaaatagtaattgtataatg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40776 ttaggtgaaatttttagaactagatgggaatttaaagaaacaaatagtaattgtataatg 40717
Query: 254 gttgcagaacaaatttcacatcatccaccagtttcatgtatttatttatcaagtagaaag 313
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 40716 gttgcagaacaaatttcacatcatccaccagtttcatgtatttatttatcaaatagaaag 40657
Query: 314 gatggatatacaatgactggt 334
|||||||||||||||||||||
Sbjct: 40656 gatggatatacaatgactggt 40636
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 12,776,217
Number of Sequences: 31962192
Number of extensions: 12776217
Number of successful extensions: 961386
Number of sequences better than 10.0: 634
length of query: 334
length of database: U,222,775,761
effective HSP length: 22
effective length of query: 312
effective length of database: T,519,607,537
effective search space: 11394117551544
effective search space used: 11394117551544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home