Homology FC-IC0621 vs Protein
Query= FC-IC0621 (FC-IC0621Q) /CSM/FC-IC/FC-IC0621Q.Seq.d/
(1593 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717 pro... 50 4e-04
AK292863_1(AK292863|pid:none) Homo sapiens cDNA FLJ76193 complet... 50 4e-04
BC148035_1(BC148035|pid:none) Bos taurus Rho-related BTB domain ... 49 8e-04
CR859023_1(CR859023|pid:none) Pongo abelii mRNA; cDNA DKFZp469P2... 48 0.001
BC026836_1(BC026836|pid:none) Mus musculus Rho-related BTB domai... 48 0.002
AK122354_1(AK122354|pid:none) Mus musculus mRNA for mKIAA0717 pr... 47 0.002
AF420001_1(AF420001|pid:none) Mus musculus DBC2 protein (Dbc2) m... 47 0.002
AK171295_1(AK171295|pid:none) Mus musculus NOD-derived CD11c +ve... 47 0.002
HB815236_1(HB815236|pid:none) Sequence 164450 from Patent EP2090... 47 0.002
AB385392_1(AB385392|pid:none) Synthetic construct DNA, clone: pF... 46 0.005
AB020685_1(AB020685|pid:none) Homo sapiens mRNA for KIAA0878 pro... 46 0.005
BC041337_1(BC041337|pid:none) Homo sapiens Rho-related BTB domai... 46 0.005
(O94844) RecName: Full=Rho-related BTB domain-containing protein... 45 0.009
CR858863_1(CR858863|pid:none) Pongo abelii mRNA; cDNA DKFZp469P1... 45 0.012
BC144800_1(BC144800|pid:none) Mus musculus Rho-related BTB domai... 44 0.035
(Q9DAK3) RecName: Full=Rho-related BTB domain-containing protein... 44 0.035
AK173015_1(AK173015|pid:none) Mus musculus premature mRNA for mK... 44 0.035
AK005770_1(AK005770|pid:none) Mus musculus adult male testis cDN... 44 0.035
JI861809_1(JI861809|pid:none) TSA: Capra hircus 8214.1.Cahikidne... 43 0.045
(Q9ZVC2) RecName: Full=Regulatory protein NPR5; AltName: Full=BT... 43 0.046
BT002986_1(BT002986|pid:none) Arabidopsis thaliana clone RAFL15-... 43 0.046
DQ450955_1(DQ450955|pid:none) Oryza sativa (japonica cultivar-gr... 43 0.059
BT039266_1(BT039266|pid:none) Zea mays full-length cDNA clone ZM... 41 0.17
AF033623_1(AF033623|pid:none) Ovis aries putative heparan sulfat... 41 0.23
FQ310506_541(FQ310506|pid:none) Dicentrarchus labrax chromosome ... 40 0.39
AK355716_1(AK355716|pid:none) Hordeum vulgare subsp. vulgare mRN... 40 0.50
BX784028_1(BX784028|pid:none) Zebrafish DNA sequence from clone ... 39 0.66
BC141145_1(BC141145|pid:none) Mus musculus BTB (POZ) domain cont... 39 0.86
(A6QL63) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 39 0.86
BX649610_1(BX649610|pid:none) Zebrafish DNA sequence from clone ... 39 0.86
AK127012_1(AK127012|pid:none) Homo sapiens cDNA FLJ45068 fis, cl... 39 0.86
AK044022_1(AK044022|pid:none) Mus musculus 10 days neonate corte... 39 0.86
AY373588_1(AY373588|pid:none) Homo sapiens ANK-repeat BTB domain... 39 0.86
(P0C7A6) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 39 0.86
AK128445_1(AK128445|pid:none) Homo sapiens cDNA FLJ46588 fis, cl... 39 0.86
AB173763_1(AB173763|pid:none) Macaca fascicularis brain cDNA clo... 39 0.86
BC072592_1(BC072592|pid:none) Mus musculus BTB (POZ) domain cont... 39 0.86
AK039038_1(AK039038|pid:none) Mus musculus adult male hypothalam... 39 0.86
AK018115_1(AK018115|pid:none) Mus musculus adult male medulla ob... 39 0.86
CP002686_6025(CP002686|pid:none) Arabidopsis thaliana chromosome... 39 1.1
JN180856_1(JN180856|pid:none) Medicago truncatula cultivar R108 ... 38 1.9
AC117082_9(AC117082|pid:none) Dictyostelium discoideum chromosom... 37 2.5
AP008217_208(AP008217|pid:none) Oryza sativa (japonica cultivar-... 37 2.5
AK367450_1(AK367450|pid:none) Hordeum vulgare subsp. vulgare mRN... 37 2.5
EU969827_1(EU969827|pid:none) Zea mays clone 336160 unknown mRNA. 37 2.5
FQ378032_67(FQ378032|pid:none) Oryza brachyantha chromosome 11. 37 2.5
EU410304_250(EU410304|pid:none) Vaccinia virus GLV-1h68, complet... 37 2.5
JN408495_1(JN408495|pid:none) Lotus japonicus BTB/POZ ankyrin re... 37 3.3
FJ532056_1(FJ532056|pid:none) Brassica rapa subsp. pekinensis NP... 37 3.3
(Q1LVW0) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 37 4.3
BX649350_1(BX649350|pid:none) Zebrafish DNA sequence from clone ... 37 4.3
AL928936_1(AL928936|pid:none) Zebrafish DNA sequence from clone ... 37 4.3
JN180860_1(JN180860|pid:none) Pisum sativum cultivar Parvus BTB/... 37 4.3
AM427664_1(AM427664|pid:none) Vitis vinifera contig VV78X250604.... 37 4.3
JN180865_1(JN180865|pid:none) Pisum sativum cultivar SGE BTB/POZ... 37 4.3
JN180862_1(JN180862|pid:none) Pisum sativum cultivar Paloma BTB/... 37 4.3
BC084274_1(BC084274|pid:none) Xenopus laevis hypothetical LOC495... 36 5.6
DQ121394_178(DQ121394|pid:none) Vaccinia virus strain Lister clo... 36 5.6
AE001362_184(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.6
AK091560_1(AK091560|pid:none) Homo sapiens cDNA FLJ34241 fis, cl... 36 7.2
BC101561_1(BC101561|pid:none) Homo sapiens BTB (POZ) domain cont... 36 7.2
CR860715_1(CR860715|pid:none) Pongo abelii mRNA; cDNA DKFZp459O0... 36 7.2
BC006756_1(BC006756|pid:none) Mus musculus ankyrin repeat and BT... 36 7.2
(Q8N961) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 36 7.2
(O08764) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 36 7.2
BC059036_1(BC059036|pid:none) Mus musculus BTB (POZ) domain cont... 36 7.2
AY678275_240(AY678275|pid:none) Vaccinia virus strain LC16m8, co... 36 7.3
GU591327_69(GU591327|pid:none) Durinskia baltica strain CS-38 ch... 35 9.5
FP671138_274(FP671138|pid:none) Mycoplasma agalactiae 5632 chrom... 35 9.5
AE014134_1504(AE014134|pid:none) Drosophila melanogaster chromos... 35 9.5
(Q4L7C9) RecName: Full=Phosphoenolpyruvate carboxykinase [ATP]; ... 35 9.5
CP001820_52(CP001820|pid:none) Veillonella parvula DSM 2008, com... 35 9.5
HQ407377_179(HQ407377|pid:none) Cowpox virus strain Austria 1999... 35 9.5
(O72736) RecName: Full=Kelch repeat and BTB domain-containing pr... 35 9.5
>AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717
protein, partial cds.
Length = 751
Score = 50.1 bits (118), Expect = 4e-04
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Frame = +2
Query: 251 RGKVKNIRS---VTIKPNEKNDDGTKSSGEFVEISIDSSINRRVFNRFIEFLYTGVLNYL 421
RG+V + S V+I+ D T S V + +DSSI F +++LYTG L
Sbjct: 406 RGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTG---EL 462
Query: 422 DKNDQ-LQETIALAESVGFKYLASACKNVLGGNEDLNPSIGTFLNDQLGETSKELFFTKK 598
D+N++ L +AE + L N+L +N I + + KE K
Sbjct: 463 DENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKEC-LAKG 521
Query: 599 ILSDIQFIVEGRSIFAHKALIFSRSNVVNALIGRNF 706
SD+ FI++ +I AHK L+ S + + A+ G F
Sbjct: 522 TFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPF 557
Score = 49.7 bits (117), Expect = 5e-04
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Frame = +1
Query: 1087 VTIKPNEKNDDGTKSSGEFVEISIDSSINRRVFNRFIEFLYTGVLNYLDKNDQ-LQETIA 1263
V+I+ D T S V + +DSSI F +++LYTG L D+N++ L
Sbjct: 418 VSIQEEMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTGEL---DENERDLMHIAH 474
Query: 1264 LAESVGFKYLASACKNVLGGNEDLNPSIGTFLNDQLGXTSKELXFTKKILSXXQFIVEGR 1443
+AE + L N+L +N I + + KE K S FI++
Sbjct: 475 IAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKEC-LAKGTFSDVTFILDDG 533
Query: 1444 SIXAHKALIFSRSNVVXALIGSNFIE 1521
+I AHK L+ S + + A+ G F+E
Sbjct: 534 TISAHKPLLISSCDWMAAMFGGPFVE 559
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 3,990,740,502
Number of extensions: 78065992
Number of successful extensions: 210651
Number of sequences better than 10.0: 74
Number of HSP's gapped: 210423
Number of HSP's successfully gapped: 96
Length of query: 531
Length of database: 1,732,582,204
Length adjustment: 137
Effective length of query: 394
Effective length of database: 999,740,023
Effective search space: 393897569062
Effective search space used: 393897569062
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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