Dictyostelium discoideum cDNA Clone FC-IC0621

Sequence FC-IC0621

ACCAATTCCA CCAGTTATGC CACCAGCAGG TAAAGCACCA TGGATTGATA
TTATTACAAG TTCTTATGAT AAAGAGATGA GAGAAACATT AAATAGTGAA
TCATTTAGTG ATGTTAAATT TACATTTTTT GAAGAGAGAC CAGTTTATGC
ACATCGTGTT ATATTATGCT CAGCATNTGA ATTCTTTANA AGGGTATTTG
GATACACATT ATCCTCTGAC CAAGCTGAGT TCAAATTGGA TGATTAAATG
AGGGGTAAGG TTAAAAATAT TCGTAGTGTT ACAATTAAAC CAAACGAAAA
GAATGATGAC GGCACTAAAT CAAGTGGTGA ATTTGTCGAG ATCTCAATCG
ACAGTTCAAT AAATCGTCGT GTTTTCAATA GATTCATTGA GTTTCTTTAC
ACTGGTGTGT TGAATTACCT TGATAAGAAT GACCAACTTC AAGAGACAAT
TGCATTGGCA GAGAGTGTCG GCTTCAAGTA TTTAGCAAGT GCTTGTAAGA
ATGTGTTGGG TGGTAATGAA GATTTGAATC CATCGATTGG CACTTTCTTA
AATGACCAAT TGGGTGAAAC TAGTAAAGAG CTATTCTTTA CTAAAAAGAT
TCTATCTGAT ATTCAATTCA TCGTTGAAGG CAGATCAATT TTTGCACATA
AAGCATTGAT TTTCTCACGT TCAAATGTTG TAAATGCGCT AATTGGTAGA
AATTTTCATT GAAAGANAAG GCAAGGTTGA AATGTCTGAT GATGTAACTT
TTGATTCATT CATNGGCGAT TTTAGAATAT TTGTACCTGN CCCGGGCG--
--------AC CAATNCCNCC AGTTATGCCA CCAGCAGGTA AAGCCCCCAT
GGATTGATAT TATTACAAGT TCTTATGATA AAGAGATGAG AGAACCATTA
AATAGTGAAT CATTTAGTGA TGTTAAATTT ACATTTTTTG AAGAGAGACC
AGTTTATGCA CATCGTGTTA TATTATGCTC AGCATCTGAA TTCTTTAGAA
GGGTATTTGG ATACACATTA TCCTCTGACC AAGCTGAGTT CAAATTGGAT
GATTTAAATG AGGGTAAGGT TAAAAATATT CGTAGTGTTA CAATTAAACC
AAACGAAAAG AATGATGACG GCACTAAATC AAGTGGTGAA TTTGTCGAGA
TCTCAATCGA CAGTTCAATA AATCGTCGTG TTTTCAATAG ATTCATTGAG
TTTCTTTACA CTGGTGTGTT GAATTACCTT GATAAGAATG ACCAACTTCA
AGAGACAATT GCATTGGCAG AGAGTGTCGG CTTCAAGTAT TTAGCAAGTG
CTTGTAAGAA TGTGTTGGGT GGTAATGAAG ATTTGAATCC ATCGATTGGC
ACTTTCTTAA ATGACCAATT GGGTGNNACT AGTAAAGAGC TANTCTTTAC
TAAAAAGATT CTATCTGANA NTCAATTCAT CGTTGAAGGC AGATCCATTT
NTGCACATAA AGCATTGATT TTCTCACGTT CTAATGTTGT AANTGCGCTA
ATTGGTAGCA ATTTCATTGA AAGAGAAGGC NAGGTTNNAA GGTCTGACTN
ACGTNACTTT CGATTCNNTC ATGGNGATTT TAGAATATAG TGT

Translated Amino Acid Sequence FC-IC0621

qfhqlchqqvkhhglillqvlmikr*ekh*ivnhlvmlnlhflkrdqfmhivlyyaqhxn
slxgyldthypltklssnwmik*gvrlkifvvlqlnqtkrmmtalnqvvnlsrsqstvq*
ivvfsidslsfftlvc*itlirmtnfkrqlhwqrvsassi*qvlvrmcwvvmki*ihrla
ls*mtnwvklvksysllkrfylifnsslkadqflhikh*fshvqml*mr*LVEIFIERXG
KVEMSDDVTFDSFXGDFRIFVPXPG---

---QXXQLCHQQVKPPWIDIITSSYDKEMREPLNSESFSDVKFTFFEERPVYAHRVILCS
ASEFFRRVFGYTLSSDQAEFKLDDLNEGKVKNIRSVTIKPNEKNDDGTKSSGEFVEISID
SSINRRVFNRFIEFLYTGVLNYLDKNDQLQETIALAESVGFKYLASACKNVLGGNEDLNP
SIGTFLNDQLGXTSKELXFTKKILSXXQFIVEGRSIXAHKALIFSRSNVVXALIGSNFIE
REGXVXRSDXRXFRFXHGDFRI*c

Homology FC-IC0621 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-IC0621 (FC-IC0621Q) /CSM/FC-IC/FC-IC0621Q.Seq.d/                  2968   0.0
FC-IC0228 (FC-IC0228Q) /CSM/FC-IC/FC-IC0228Q.Seq.d/                  1467   0.0
FC-IC1572 (FC-IC1572Q) /CSM/FC-IC/FC-IC1572Q.Seq.d/                  1447   0.0
FC-IC0242 (FC-IC0242Q) /CSM/FC-IC/FC-IC0242Q.Seq.d/                  1447   0.0
FC-IC1620 (FC-IC1620Q) /CSM/FC-IC/FC-IC1620Q.Seq.d/                  1439   0.0
FC-IC0284 (FC-IC0284Q) /CSM/FC-IC/FC-IC0284Q.Seq.d/                  1403   0.0
FC-IC1196 (FC-IC1196Q) /CSM/FC-IC/FC-IC1196Q.Seq.d/                  1398   0.0
FC-IC1197 (FC-IC1197Q) /CSM/FC-IC/FC-IC1197Q.Seq.d/                  1392   0.0
FC-IC0027 (FC-IC0027Q) /CSM/FC-IC/FC-IC0027Q.Seq.d/                  1053   0.0
FC-IC0005 (FC-IC0005Q) /CSM/FC-IC/FC-IC0005Q.Seq.d/                   741   0.0

Homology FC-IC0621 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gen...  1291   0.0    4
CG110013|CG110013.1 PUIMI40TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.031  2
CC433814|CC433814.1 PUHOU87TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.044  2
CG111380|CG111380.1 PUFRH74TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.045  2
AC036232|AC036232.3 Homo sapiens chromosome 17 clone RP11-60...    38   0.46   10
BW128099|BW128099.1 Ciona intestinalis cDNA, clone:rcign016n...    36   0.52   2
AC090137|AC090137.4 Homo sapiens chromosome 8, clone RP11-56...    38   0.70   9
AC016406|AC016406.2 Homo sapiens clone RP11-45L18, LOW-PASS ...    36   0.95   7
AC021296|AC021296.2 Homo sapiens clone RP11-23F11, WORKING D...    34   1.1    10
AE006338|AE006338.1 Lactococcus lactis subsp. lactis IL1403 ...    42   1.9    2

Homology FC-IC0621 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717 pro...    50   4e-04
AK292863_1(AK292863|pid:none) Homo sapiens cDNA FLJ76193 complet...    50   4e-04
BC148035_1(BC148035|pid:none) Bos taurus Rho-related BTB domain ...    49   8e-04
CR859023_1(CR859023|pid:none) Pongo abelii mRNA; cDNA DKFZp469P2...    48   0.001
BC026836_1(BC026836|pid:none) Mus musculus Rho-related BTB domai...    48   0.002
AK122354_1(AK122354|pid:none) Mus musculus mRNA for mKIAA0717 pr...    47   0.002
AF420001_1(AF420001|pid:none) Mus musculus DBC2 protein (Dbc2) m...    47   0.002
AK171295_1(AK171295|pid:none) Mus musculus NOD-derived CD11c +ve...    47   0.002
HB815236_1(HB815236|pid:none) Sequence 164450 from Patent EP2090...    47   0.002
AB385392_1(AB385392|pid:none) Synthetic construct DNA, clone: pF...    46   0.005

Homology FC-IC0621 vs Genome