Homology FC-IC0621 vs DNA
Query= FC-IC0621 (FC-IC0621Q) /CSM/FC-IC/FC-IC0621Q.Seq.d/
(1593 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,679,270 sequences; T,251,742,201 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gen... 1291 0.0 4
CG110013|CG110013.1 PUIMI40TD ZM_0.6_1.0_KB Zea mays genomic... 38 0.031 2
CC433814|CC433814.1 PUHOU87TD ZM_0.6_1.0_KB Zea mays genomic... 38 0.044 2
CG111380|CG111380.1 PUFRH74TD ZM_0.6_1.0_KB Zea mays genomic... 38 0.045 2
AC036232|AC036232.3 Homo sapiens chromosome 17 clone RP11-60... 38 0.46 10
BW128099|BW128099.1 Ciona intestinalis cDNA, clone:rcign016n... 36 0.52 2
AC090137|AC090137.4 Homo sapiens chromosome 8, clone RP11-56... 38 0.70 9
AC016406|AC016406.2 Homo sapiens clone RP11-45L18, LOW-PASS ... 36 0.95 7
AC021296|AC021296.2 Homo sapiens clone RP11-23F11, WORKING D... 34 1.1 10
AE006338|AE006338.1 Lactococcus lactis subsp. lactis IL1403 ... 42 1.9 2
CC355080|CC355080.1 PUEEM88TD ZM_0.6_1.0_KB Zea mays genomic... 40 2.2 2
AC016059|AC016059.2 Homo sapiens chromosome 11 clone RP11-29... 38 2.3 2
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 ma... 36 3.0 14
AC133460|AC133460.1 Homo sapiens chromosome 11 clone CTD-202... 38 4.6 3
AC068649|AC068649.18 Homo sapiens chromosome 12 clone RP11-3... 32 4.9 11
AC093534|AC093534.2 Homo sapiens chromosome 5 clone RP11-492... 34 5.1 9
AC145932|AC145932.2 Gallus gallus chromosome UNK clone CH261... 44 5.9 1
AC017095|AC017095.7 Homo sapiens BAC clone RP11-516C4 from 2... 44 5.9 1
AC115026|AC115026.3 Mus musculus clone RP24-238A19, WORKING ... 44 5.9 1
AC073665|AC073665.1 Mus musculus clone CT7-122J17, WORKING D... 44 5.9 1
AC068653|AC068653.3 Mus musculus clone RP23-450D13, *** SEQU... 36 6.0 9
AC130380|AC130380.3 Homo sapiens chromosome 17 clone RP13-39... 36 7.8 4
BX247904|BX247904.4 Zebrafish DNA sequence *** SEQUENCING IN... 36 8.0 4
AC026032|AC026032.3 Homo sapiens chromosome 8 clone RP11-56A... 38 8.6 9
AP003190|AP003190.2 Clostridium perfringens str. 13 DNA, com... 32 9.0 14
>AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gene,
complete cds.
Length = 3457
Score = 1291 bits (651), Expect(3) = 0.0
Identities = 686/701 (97%)
Strand = Plus / Plus
Query: 847 ccatggattgatattattacaagttcttatgataaagagatgagagaaccattaaatagt 906
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1304 ccatggattgatattattacaagttcttatgataaagagatgagagaaacattaaatagt 1363
Query: 907 gaatcatttagtgatgttaaatttacattttttgaagagagaccagtttatgcacatcgt 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 gaatcatttagtgatgttaaatttacattttttgaagagagaccagtttatgcacatcgt 1423
Query: 967 gttatattatgctcagcatctgaattctttagaagggtatttggatacacattatcctct 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 gttatattatgctcagcatctgaattctttagaagggtatttggatacacattatcctct 1483
Query: 1027 gaccaagctgagttcaaattggatgatttaaatgagggtaaggttaaaaatattcgtagt 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 gaccaagctgagttcaaattggatgatttaaatgagggtaaggttaaaaatattcgtagt 1543
Query: 1087 gttacaattaaaccaaacgaaaagaatgatgacggcactaaatcaagtggtgaatttgtc 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 gttacaattaaaccaaacgaaaagaatgatgacggcactaaatcaagtggtgaatttgtc 1603
Query: 1147 gagatctcaatcgacagttcaataaatcgtcgtgttttcaatagattcattgagtttctt 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 gagatctcaatcgacagttcaataaatcgtcgtgttttcaatagattcattgagtttctt 1663
Query: 1207 tacactggtgtgttgaattaccttgataagaatgaccaacttcaagagacaattgcattg 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 tacactggtgtgttgaattaccttgataagaatgaccaacttcaagagacaattgcattg 1723
Query: 1267 gcagagagtgtcggcttcaagtatttagcaagtgcttgtaagaatgtgttgggtggtaat 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1724 gcagagagtgtcggcttcaagtatttagcaagtgcttgtaagaatgtgttgggtggtaat 1783
Query: 1327 gaagatttgaatccatcgattggcactttcttaaatgaccaattgggtgnnactagtaaa 1386
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1784 gaagatttgaatccatcgattggcactttcttaaatgaccaattgggtgaaactagtaaa 1843
Query: 1387 gagctantctttactaaaaagattctatctganantcaattcatcgttgaaggcagatcc 1446
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1844 gagctattctttactaaaaagattctatctgatattcaattcatcgttgaaggcagatca 1903
Query: 1447 atttntgcacataaagcattgattttctcacgttctaatgttgtaantgcgctaattggt 1506
|||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 1904 atttttgcacataaagcattgattttctcacgttcaaatgttgtaaatgcgctaattggt 1963
Query: 1507 agcaatttcattgaaagagaaggcnaggttnnaaggtctga 1547
|| ||||||||||||||||||||| ||||| || ||||||
Sbjct: 1964 agaaatttcattgaaagagaaggcaaggttgaaatgtctga 2004
Score = 898 bits (453), Expect(4) = 0.0
Identities = 453/453 (100%)
Strand = Plus / Plus
Query: 253 gggtaaggttaaaaatattcgtagtgttacaattaaaccaaacgaaaagaatgatgacgg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 gggtaaggttaaaaatattcgtagtgttacaattaaaccaaacgaaaagaatgatgacgg 1578
Query: 313 cactaaatcaagtggtgaatttgtcgagatctcaatcgacagttcaataaatcgtcgtgt 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 cactaaatcaagtggtgaatttgtcgagatctcaatcgacagttcaataaatcgtcgtgt 1638
Query: 373 tttcaatagattcattgagtttctttacactggtgtgttgaattaccttgataagaatga 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 tttcaatagattcattgagtttctttacactggtgtgttgaattaccttgataagaatga 1698
Query: 433 ccaacttcaagagacaattgcattggcagagagtgtcggcttcaagtatttagcaagtgc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1699 ccaacttcaagagacaattgcattggcagagagtgtcggcttcaagtatttagcaagtgc 1758
Query: 493 ttgtaagaatgtgttgggtggtaatgaagatttgaatccatcgattggcactttcttaaa 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1759 ttgtaagaatgtgttgggtggtaatgaagatttgaatccatcgattggcactttcttaaa 1818
Query: 553 tgaccaattgggtgaaactagtaaagagctattctttactaaaaagattctatctgatat 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 tgaccaattgggtgaaactagtaaagagctattctttactaaaaagattctatctgatat 1878
Query: 613 tcaattcatcgttgaaggcagatcaatttttgcacataaagcattgattttctcacgttc 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 tcaattcatcgttgaaggcagatcaatttttgcacataaagcattgattttctcacgttc 1938
Query: 673 aaatgttgtaaatgcgctaattggtagaaattt 705
|||||||||||||||||||||||||||||||||
Sbjct: 1939 aaatgttgtaaatgcgctaattggtagaaattt 1971
Score = 474 bits (239), Expect(4) = 0.0
Identities = 243/245 (99%)
Strand = Plus / Plus
Query: 1 accaattccaccagttatgccaccagcaggtaaagcaccatggattgatattattacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 accaattccaccagttatgccaccagcaggtaaagcaccatggattgatattattacaag 1326
Query: 61 ttcttatgataaagagatgagagaaacattaaatagtgaatcatttagtgatgttaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 ttcttatgataaagagatgagagaaacattaaatagtgaatcatttagtgatgttaaatt 1386
Query: 121 tacattttttgaagagagaccagtttatgcacatcgtgttatattatgctcagcatntga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1387 tacattttttgaagagagaccagtttatgcacatcgtgttatattatgctcagcatctga 1446
Query: 181 attctttanaagggtatttggatacacattatcctctgaccaagctgagttcaaattgga 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 attctttagaagggtatttggatacacattatcctctgaccaagctgagttcaaattgga 1506
Query: 241 tgatt 245
|||||
Sbjct: 1507 tgatt 1511
Score = 113 bits (57), Expect(4) = 0.0
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 704 tttcattgaaaganaaggcaaggttgaaatgtctgatgatgtaacttttgattcattcat 763
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1969 tttcattgaaagagaaggcaaggttgaaatgtctgatgatgtaacttttgattcattcat 2028
Score = 60.0 bits (30), Expect(3) = 0.0
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 809 accaatnccnccagttatgccaccagcaggtaaagc 844
|||||| || ||||||||||||||||||||||||||
Sbjct: 1267 accaattccaccagttatgccaccagcaggtaaagc 1302
Score = 44.1 bits (22), Expect(4) = 0.0
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 765 ggcgattttagaatatttgtac 786
||||||||||||||||||||||
Sbjct: 2029 ggcgattttagaatatttgtac 2050
Score = 40.1 bits (20), Expect(3) = 0.0
Identities = 29/33 (87%)
Strand = Plus / Plus
Query: 1556 actttcgattcnntcatggngattttagaatat 1588
||||| ||||| |||||| |||||||||||||
Sbjct: 2012 acttttgattcattcatggcgattttagaatat 2044
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 31,452,139
Number of Sequences: 30679270
Number of extensions: 31452139
Number of successful extensions: 2290696
Number of sequences better than 10.0: 51
length of query: 1593
length of database: T,251,742,201
effective HSP length: 23
effective length of query: 1570
effective length of database: S,546,118,991
effective search space: 55807406815870
effective search space used: 55807406815870
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home