Dictyostelium discoideum cDNA Clone FC-IC0461

Sequence FC-IC0461

ACTTGTCCGA AAGATTATTC TAATTCCGCC TCACCTTTGT AAGATTACCC
GCTGANCTTA AGCATATCAG TAAGCGGAGG AAAAGAAACT AACTAGGATT
CCGTCAGTAA CGGCGAGTGA AGACGGAATA GCCCAAGGTT CAAACCTGGA
TCTCTTCGAG GTTAGGTGAT GTGACCTATG GACTGATGGA GCCCGCTGTT
GTGACTGCTA ATTCCGTTTG GAATTTCNAG TCGTAGAAGG TGATAACCCT
GTTCGCAGTA TCACAACAGT TGGACTTTGC CATTAGCTCC ACGAGTAGGA
ATGTCTGAAA TTGCATTCTG AATGGGTGAT AAGATTCATC CAAGGCTAAA
TATATGTTAG GAGATCGATA GCATACAAGT

Translated Amino Acid Sequence FC-IC0461

lserlf*frltfvrlpaxlkhiskrrkrn*lgfrq*rrvkte*PKVQTWISSRLGDVTYG
LMEPAVVTANSVWNFXS*kvitlfavsqqldfaisstsrnv*ncilng**dsskakymlg
dr*hts

Homology FC-IC0461 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK396 (VHK396Q) /CSM/VH/VHK3-D/VHK396Q.Seq.d/                        741   0.0
FC-IC1475 (FC-IC1475Q) /CSM/FC-IC/FC-IC1475Q.Seq.d/                   741   0.0
FC-IC1168 (FC-IC1168Q) /CSM/FC-IC/FC-IC1168Q.Seq.d/                   741   0.0
FC-IC0461 (FC-IC0461Q) /CSM/FC-IC/FC-IC0461Q.Seq.d/                   741   0.0
CHI777 (CHI777Q) /CSM/CH/CHI7-D/CHI777Q.Seq.d/                        698   0.0
SHI761 (SHI761Q) /CSM/SH/SHI7-C/SHI761Q.Seq.d/                        696   0.0
CHN482 (CHN482Q) /CSM/CH/CHN4-D/CHN482Q.Seq.d/                        696   0.0
FC-IC0540 (FC-IC0540Q) /CSM/FC-IC/FC-IC0540Q.Seq.d/                   694   0.0
CHK282 (CHK282Q) /CSM/CH/CHK2-D/CHK282Q.Seq.d/                        688   0.0
VFK410 (VFK410Q) /CSM/VF/VFK4-A/VFK410Q.Seq.d/                        686   0.0

Homology FC-IC0461 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY171066|AY171066.1 Dictyostelium discoideum extrachromosoma...   741   0.0    1
X00601|X00601.1 Dictyostelium discoideum ribosomal RNA gene.      726   0.0    1
M19231|M19231.1 Slime mold (D.discoideum) 28S large subunit ...   678   0.0    1
AC121240|AC121240.18 Medicago truncatula clone mth1-51o19, W...    98   3e-38  4
AC122172|AC122172.25 Medicago truncatula clone mth2-27e7, WO...    98   3e-37  4
AC136838|AC136838.17 Medicago truncatula clone mth1-5j15, WO...    98   5e-36  4
AC137509|AC137509.11 Medicago truncatula clone mth2-20l21, W...    98   1e-35  4
AC129003|AC129003.4 Rattus norvegicus clone CH230-6L3, *** S...   101   3e-34  3
AY112929|AY112929.1 Salal associated fungal clone UBCtra1522...   141   8e-30  1
U15003|U15003.1 Opisthorchis viverrini 28S rRNA gene, partia...   131   2e-29  2

Homology FC-IC0461 vs Protein

Sequences producing significant alignments:                      (bits) Value


AE010299_1578(AE010299|pid:none) Methanosarcina acetivorans str....    35   0.99
CP000930_2260(CP000930|pid:none) Heliobacterium modesticaldum Ic...    34   2.9
CP000423_1127(CP000423|pid:none) Lactobacillus casei ATCC 334, c...    33   4.9
CP002616_1370(CP002616|pid:none) Lactobacillus casei LC2W, compl...    33   4.9
CP001084_1137(CP001084|pid:none) Lactobacillus casei str. Zhang,...    33   4.9
GU474881_38(GU474881|pid:none) Uncultured Acidobacteriales bacte...    33   4.9
GU474883_37(GU474883|pid:none) Uncultured delta proteobacterium ...    33   6.4
GU474879_27(GU474879|pid:none) Uncultured delta proteobacterium ...    33   6.4
GU474914_23(GU474914|pid:none) Uncultured delta proteobacterium ...    32   8.3
AP011548_1170(AP011548|pid:none) Lactobacillus rhamnosus ATCC 53...    32   8.3

Homology FC-IC0461 vs Genome