Homology FC-IC0242 vs Protein
Query= FC-IC0242 (FC-IC0242Q) /CSM/FC-IC/FC-IC0242Q.Seq.d/
(910 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FQ310506_541(FQ310506|pid:none) Dicentrarchus labrax chromosome ... 53 2e-05
AB385392_1(AB385392|pid:none) Synthetic construct DNA, clone: pF... 51 1e-04
AB020685_1(AB020685|pid:none) Homo sapiens mRNA for KIAA0878 pro... 51 1e-04
BC041337_1(BC041337|pid:none) Homo sapiens Rho-related BTB domai... 51 1e-04
BC148035_1(BC148035|pid:none) Bos taurus Rho-related BTB domain ... 49 3e-04
AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717 pro... 49 5e-04
BC144800_1(BC144800|pid:none) Mus musculus Rho-related BTB domai... 49 5e-04
(Q9DAK3) RecName: Full=Rho-related BTB domain-containing protein... 49 5e-04
AK173015_1(AK173015|pid:none) Mus musculus premature mRNA for mK... 49 5e-04
AK005770_1(AK005770|pid:none) Mus musculus adult male testis cDN... 49 5e-04
AC117082_9(AC117082|pid:none) Dictyostelium discoideum chromosom... 49 5e-04
AK292863_1(AK292863|pid:none) Homo sapiens cDNA FLJ76193 complet... 49 5e-04
CR859023_1(CR859023|pid:none) Pongo abelii mRNA; cDNA DKFZp469P2... 48 6e-04
BC026836_1(BC026836|pid:none) Mus musculus Rho-related BTB domai... 47 0.002
AK122354_1(AK122354|pid:none) Mus musculus mRNA for mKIAA0717 pr... 46 0.002
AF420001_1(AF420001|pid:none) Mus musculus DBC2 protein (Dbc2) m... 46 0.002
CR858863_1(CR858863|pid:none) Pongo abelii mRNA; cDNA DKFZp469P1... 46 0.002
AK171295_1(AK171295|pid:none) Mus musculus NOD-derived CD11c +ve... 46 0.002
(O94844) RecName: Full=Rho-related BTB domain-containing protein... 46 0.002
BX649610_1(BX649610|pid:none) Zebrafish DNA sequence from clone ... 45 0.004
(P0C7A6) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 45 0.004
JI861809_1(JI861809|pid:none) TSA: Capra hircus 8214.1.Cahikidne... 45 0.005
AE014296_3770(AE014296|pid:none) Drosophila melanogaster chromos... 43 0.021
AF221547_1(AF221547|pid:none) Drosophila melanogaster RhoGTPase ... 43 0.021
(Q1LVW0) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 43 0.021
BX649350_1(BX649350|pid:none) Zebrafish DNA sequence from clone ... 43 0.021
AL928936_1(AL928936|pid:none) Zebrafish DNA sequence from clone ... 43 0.021
BC006756_1(BC006756|pid:none) Mus musculus ankyrin repeat and BT... 42 0.035
(O08764) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 42 0.035
AY074524_1(AY074524|pid:none) Arabidopsis thaliana unknown prote... 42 0.046
(B7U179) RecName: Full=ARMADILLO BTB ARABIDOPSIS PROTEIN 1; ... 42 0.046
AB173763_1(AB173763|pid:none) Macaca fascicularis brain cDNA clo... 42 0.046
BC141145_1(BC141145|pid:none) Mus musculus BTB (POZ) domain cont... 42 0.060
AK044022_1(AK044022|pid:none) Mus musculus 10 days neonate corte... 42 0.060
AF033623_1(AF033623|pid:none) Ovis aries putative heparan sulfat... 42 0.060
BC072592_1(BC072592|pid:none) Mus musculus BTB (POZ) domain cont... 42 0.060
AK039038_1(AK039038|pid:none) Mus musculus adult male hypothalam... 42 0.060
AK018115_1(AK018115|pid:none) Mus musculus adult male medulla ob... 42 0.060
AK091560_1(AK091560|pid:none) Homo sapiens cDNA FLJ34241 fis, cl... 41 0.078
(A6QL63) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 41 0.078
BC084274_1(BC084274|pid:none) Xenopus laevis hypothetical LOC495... 41 0.078
AK127012_1(AK127012|pid:none) Homo sapiens cDNA FLJ45068 fis, cl... 41 0.078
CR860715_1(CR860715|pid:none) Pongo abelii mRNA; cDNA DKFZp459O0... 41 0.078
AY373588_1(AY373588|pid:none) Homo sapiens ANK-repeat BTB domain... 41 0.078
(Q8N961) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 41 0.078
AK128445_1(AK128445|pid:none) Homo sapiens cDNA FLJ46588 fis, cl... 41 0.078
CP001159_136(CP001159|pid:none) Thalassiosira pseudonana CCMP133... 41 0.078
HB815236_1(HB815236|pid:none) Sequence 164450 from Patent EP2090... 41 0.10
HQ288144_1(HQ288144|pid:none) Hottentotta judaicus clone Hj0079 ... 40 0.23
AL606921_1(AL606921|pid:none) Mouse DNA sequence from clone RP23... 39 0.39
(Q8CII0) RecName: Full=Zinc finger and BTB domain-containing pro... 39 0.39
AK132152_1(AK132152|pid:none) Mus musculus 14, 17 days embryo he... 39 0.39
AK228073_1(AK228073|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.39
BC059036_1(BC059036|pid:none) Mus musculus BTB (POZ) domain cont... 39 0.51
AJ720925_1(AJ720925|pid:none) Gallus gallus mRNA for hypothetica... 39 0.51
BC101561_1(BC101561|pid:none) Homo sapiens BTB (POZ) domain cont... 38 0.66
(Q8NAP8) RecName: Full=Zinc finger and BTB domain-containing pro... 38 0.66
AK317640_1(AK317640|pid:none) Arabidopsis thaliana AT5G19330 mRN... 38 0.66
AK357951_1(AK357951|pid:none) Hordeum vulgare subsp. vulgare mRN... 38 0.86
AK360591_1(AK360591|pid:none) Hordeum vulgare subsp. vulgare mRN... 38 0.86
AP003633_29(AP003633|pid:none) Oryza sativa Japonica Group genom... 38 0.86
CP001959_2585(CP001959|pid:none) Brachyspira murdochii DSM 12563... 37 1.1
AP008217_208(AP008217|pid:none) Oryza sativa (japonica cultivar-... 37 1.1
EU969827_1(EU969827|pid:none) Zea mays clone 336160 unknown mRNA. 37 1.1
FQ378032_67(FQ378032|pid:none) Oryza brachyantha chromosome 11. 37 1.1
CP002686_6025(CP002686|pid:none) Arabidopsis thaliana chromosome... 37 1.5
(Q9ZVC2) RecName: Full=Regulatory protein NPR5; AltName: Full=BT... 37 1.5
JN408495_1(JN408495|pid:none) Lotus japonicus BTB/POZ ankyrin re... 37 1.5
DQ450955_1(DQ450955|pid:none) Oryza sativa (japonica cultivar-gr... 37 1.5
BX784028_1(BX784028|pid:none) Zebrafish DNA sequence from clone ... 37 1.5
AK355716_1(AK355716|pid:none) Hordeum vulgare subsp. vulgare mRN... 37 1.5
BT002986_1(BT002986|pid:none) Arabidopsis thaliana clone RAFL15-... 37 1.5
BT039266_1(BT039266|pid:none) Zea mays full-length cDNA clone ZM... 37 1.9
JN180860_1(JN180860|pid:none) Pisum sativum cultivar Parvus BTB/... 37 1.9
BC155152_1(BC155152|pid:none) Danio rerio zgc:110075, mRNA (cDNA... 37 1.9
BC092719_1(BC092719|pid:none) Danio rerio zgc:110075, mRNA (cDNA... 37 1.9
BC042246_1(BC042246|pid:none) Xenopus laevis BTB/POZ and zinc-fi... 37 1.9
AM427664_1(AM427664|pid:none) Vitis vinifera contig VV78X250604.... 37 1.9
JN180856_1(JN180856|pid:none) Medicago truncatula cultivar R108 ... 37 1.9
FJ532056_1(FJ532056|pid:none) Brassica rapa subsp. pekinensis NP... 37 1.9
JN180865_1(JN180865|pid:none) Pisum sativum cultivar SGE BTB/POZ... 37 1.9
JN180862_1(JN180862|pid:none) Pisum sativum cultivar Paloma BTB/... 37 1.9
AP004183_11(AP004183|pid:none) Oryza sativa Japonica Group genom... 37 1.9
CR954214_345(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 36 2.5
FR823386_206(FR823386|pid:none) Neospora caninum Liverpool compl... 36 2.5
AK100472_1(AK100472|pid:none) Oryza sativa Japonica Group cDNA c... 36 2.5
BC043960_1(BC043960|pid:none) Xenopus laevis hypothetical protei... 36 2.5
BT063824_1(BT063824|pid:none) Zea mays full-length cDNA clone ZM... 36 2.5
AC132492_6(AC132492|pid:none) Oryza sativa (japonica cultivar-gr... 36 2.5
CP002160_1979(CP002160|pid:none) Clostridium cellulovorans 743B,... 36 3.3
AC140916_9(AC140916|pid:none) Medicago truncatula clone mth2-12b... 36 3.3
AK367450_1(AK367450|pid:none) Hordeum vulgare subsp. vulgare mRN... 36 3.3
CP001820_52(CP001820|pid:none) Veillonella parvula DSM 2008, com... 36 3.3
T15442(T15442)hypothetical protein C07D10.2 - Caenorhabditis ele... 36 3.3
CR378676_58(CR378676|pid:none) Photobacterium profundum SS9 chro... 36 3.3
JI164394_1(JI164394|pid:none) TSA: Ascaris suum ASCF_417_5100 mR... 36 3.3
EF087879_1(EF087879|pid:none) Picea sitchensis clone WS02815_I02... 36 3.3
(Q54BA2) RecName: Full=Ankyrin repeat, bromo and BTB domain-cont... 35 4.3
AP010935_517(AP010935|pid:none) Streptococcus dysgalactiae subsp... 32 4.3
HE580276_283(HE580276|pid:none) Naumovozyma dairenensis CBS 421 ... 35 5.6
CR848583_1(CR848583|pid:none) Xenopus tropicalis finished cDNA, ... 35 5.6
AK343025_1(AK343025|pid:none) Acyrthosiphon pisum ACYPI008207 mR... 35 5.6
BC155387_1(BC155387|pid:none) Xenopus tropicalis regulator of ch... 35 5.6
BT053827_1(BT053827|pid:none) Zea mays full-length cDNA clone ZM... 35 5.6
FN357555_36(FN357555|pid:none) Schistosoma mansoni genome sequen... 35 5.6
FP476056_3794(FP476056|pid:none) Zobellia galactanivorans strain... 35 7.3
FJ821026_10(FJ821026|pid:none) Drosophila miranda strain MSH22 c... 35 7.3
FJ418596_1(FJ418596|pid:none) Glycine max NPR1-2 protein gene, p... 35 7.3
AM295007_1405(AM295007|pid:none) Streptococcus pyogenes Manfredo... 32 9.3
CP002215_547(CP002215|pid:none) Streptococcus dysgalactiae subsp... 31 9.3
CP002346_587(CP002346|pid:none) Riemerella anatipestifer DSM 158... 34 9.5
BC068656_1(BC068656|pid:none) Xenopus laevis hypothetical protei... 34 9.5
CP002562_1529(CP002562|pid:none) Riemerella anatipestifer RA-GD,... 34 9.5
BC161229_1(BC161229|pid:none) Xenopus tropicalis B-cell CLL/lymp... 34 9.5
CP000568_1480(CP000568|pid:none) Clostridium thermocellum ATCC 2... 34 9.5
AK369877_1(AK369877|pid:none) Hordeum vulgare subsp. vulgare mRN... 34 9.5
BT095319_1(BT095319|pid:none) Soybean clone JCVI-FLGm-7M5 unknow... 34 9.5
>FQ310506_541(FQ310506|pid:none) Dicentrarchus labrax chromosome
sequence corresponding to linkage group 1, top part,
complete sequence.
Length = 587
Score = 53.1 bits (126), Expect = 2e-05
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = +1
Query: 508 DSLRFLYTGVLNYLDKNDQLQETIA--LAESVGFKYLASACKNVLGGNEDLNP-SIGTFL 678
++L F+Y G + D LQE + L S+ L ++++G D P +
Sbjct: 323 ETLMFIYRGAWEW----DHLQEALEEKLKNSLAVAQLMERIRSLIG--RDRGPRDTPSAR 376
Query: 679 NDQLGETSKELFFTKKILSDIQFIVEGRSIFAHKALIFSRSNVVNALIGRNFIEREGKVE 858
QLG + F + SD+ F+V+G + AH+A++ +R +V+ A+ + E +V
Sbjct: 377 AAQLGPQTLVNLFNSPLYSDVIFMVQGSVLPAHRAVLVARCDVMAAMFSGKYAEARSRVV 436
Query: 859 MSDDVTFDSFMAILEYL 909
V+ D+F++ LEYL
Sbjct: 437 PIHGVSSDTFLSFLEYL 453
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,337,174,025
Number of extensions: 46062053
Number of successful extensions: 120397
Number of sequences better than 10.0: 117
Number of HSP's gapped: 120346
Number of HSP's successfully gapped: 131
Length of query: 303
Length of database: 1,732,582,204
Length adjustment: 131
Effective length of query: 172
Effective length of database: 1,031,835,301
Effective search space: 177475671772
Effective search space used: 177475671772
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home