Homology FC-IC0242 vs DNA
Query= FC-IC0242 (FC-IC0242Q) /CSM/FC-IC/FC-IC0242Q.Seq.d/
(910 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,679,270 sequences; T,251,742,201 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gen... 777 0.0 3
BX323991|BX323991.5 Zebrafish DNA sequence *** SEQUENCING IN... 34 0.62 6
AC016406|AC016406.2 Homo sapiens clone RP11-45L18, LOW-PASS ... 36 0.97 5
AC068649|AC068649.18 Homo sapiens chromosome 12 clone RP11-3... 34 1.7 9
AC073665|AC073665.1 Mus musculus clone CT7-122J17, WORKING D... 44 3.3 1
AC145932|AC145932.2 Gallus gallus chromosome UNK clone CH261... 44 3.3 1
AC115026|AC115026.3 Mus musculus clone RP24-238A19, WORKING ... 44 3.3 1
AC017095|AC017095.7 Homo sapiens BAC clone RP11-516C4 from 2... 44 3.3 1
AE017057|AE017057.1 Oryza sativa (japonica cultivar-group) c... 40 4.8 6
AE007655|AE007655.1 Clostridium acetobutylicum ATCC824 secti... 42 7.1 2
AC119105|AC119105.4 Rattus norvegicus clone CH230-232M21, WO... 36 7.5 5
AP004598|AP004598.1 Oceanobacillus iheyensis HTE831 genomic ... 32 8.3 9
AC102494|AC102494.6 Mus musculus chromosome 7, clone RP24-56... 42 13 1
AE006338|AE006338.1 Lactococcus lactis subsp. lactis IL1403 ... 42 13 1
AC005509|AC005509.1 Homo sapiens chromosome 4 clone B200N5 m... 42 13 1
AC003091|AC003091.1 Homo sapiens BAC clone CTA-326G4 from 7,... 42 13 1
X80800|X80800.1 A.calcoaceticus genes lipB, lipA and trmD, p... 42 13 1
AL844172|AL844172.8 Zebrafish DNA sequence from clone DKEY-2... 42 13 1
BI925123|BI925123.1 EST545012 tomato flower, buds 0-3 mm Lyc... 42 13 1
AL672006|AL672006.7 Mouse DNA sequence from clone RP23-28L9 ... 42 13 1
B88477|B88477.1 CpG0220A CpIOWAgDNA1 Cryptosporidium parvum ... 42 13 1
AF323668|AF323668.1 Bacteriophage bIL285, complete genome. 42 13 1
AC072062|AC072062.3 Homo sapiens BAC clone RP11-548N17 from ... 42 13 1
AL627445|AL627445.21 Mouse DNA sequence from clone RP23-81D2... 42 13 1
AZ494486|AZ494486.1 1M0329K16R Mouse 10kb plasmid UUGC1M lib... 42 13 1
AC009455|AC009455.9 Homo sapiens chromosome 18, clone RP11-1... 42 13 1
BX322538|BX322538.2 Zebrafish DNA sequence *** SEQUENCING IN... 42 13 1
AY003885|AY003885.1 Cloning vector pZR80, complete sequence. 42 13 1
AC032012|AC032012.4 Mus musculus chromosome 11 clone RP23-23... 42 13 1
AC103951|AC103951.7 Homo sapiens chromosome 18, clone RP11-1... 42 13 1
BE055442|BE055442.2 GA__Ea0005H01f Gossypium arboreum 7-10 d... 42 13 1
AC090168|AC090168.3 Homo sapiens chromosome 18 clone RP11-12... 42 13 1
>AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gene,
complete cds.
Length = 3457
Score = 777 bits (392), Expect(3) = 0.0
Identities = 392/392 (100%)
Strand = Plus / Plus
Query: 519 gtttctttacactggtgtgttgaattaccttgataagaatgaccaacttcaagagacaat 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 gtttctttacactggtgtgttgaattaccttgataagaatgaccaacttcaagagacaat 1716
Query: 579 tgcattggcagagagtgtcggcttcaagtatttagcaagtgcttgtaagaatgtgttggg 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 tgcattggcagagagtgtcggcttcaagtatttagcaagtgcttgtaagaatgtgttggg 1776
Query: 639 tggtaatgaagatttgaatccatcgattggcactttcttaaatgaccaattgggtgaaac 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1777 tggtaatgaagatttgaatccatcgattggcactttcttaaatgaccaattgggtgaaac 1836
Query: 699 tagtaaagagctattctttactaaaaagattctatctgatattcaattcatcgttgaagg 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1837 tagtaaagagctattctttactaaaaagattctatctgatattcaattcatcgttgaagg 1896
Query: 759 cagatcaatttttgcacataaagcattgattttctcacgttcaaatgttgtaaatgcgct 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897 cagatcaatttttgcacataaagcattgattttctcacgttcaaatgttgtaaatgcgct 1956
Query: 819 aattggtagaaatttcattgaaagagaaggcaaggttgaaatgtctgatgatgtaacttt 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 aattggtagaaatttcattgaaagagaaggcaaggttgaaatgtctgatgatgtaacttt 2016
Query: 879 tgattcattcatggcgattttagaatatttgt 910
||||||||||||||||||||||||||||||||
Sbjct: 2017 tgattcattcatggcgattttagaatatttgt 2048
Score = 466 bits (235), Expect(3) = 0.0
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 127 accaattccaccagttatgccaccagcaggtaaagcaccatggattgatattattacaag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 accaattccaccagttatgccaccagcaggtaaagcaccatggattgatattattacaag 1326
Query: 187 ttcttatgataaagagatgagagaaacattaaatagtgaatcatttagtgatgttaaatt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 ttcttatgataaagagatgagagaaacattaaatagtgaatcatttagtgatgttaaatt 1386
Query: 247 tacattttttgaagagagaccagtttatgcacatcgtgttatattatgctcagcatctga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 tacattttttgaagagagaccagtttatgcacatcgtgttatattatgctcagcatctga 1446
Query: 307 attctttagaagggtatttggatacacattatcctctgaccaagctgagttcaaa 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 attctttagaagggtatttggatacacattatcctctgaccaagctgagttcaaa 1501
Score = 315 bits (159), Expect(3) = 0.0
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 360 aaattggatgatttaaatgagggtaaggttaaaaatattcgtagtgttacaattaaacca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 aaattggatgatttaaatgagggtaaggttaaaaatattcgtagtgttacaattaaacca 1558
Query: 420 aacgaaaagaatgatgacggcactaaatcaagtggtgaatttgtcgagatctcaatcgac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 aacgaaaagaatgatgacggcactaaatcaagtggtgaatttgtcgagatctcaatcgac 1618
Query: 480 agttcaataaatcgtcgtgttttcaatagattcattgag 518
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 agttcaataaatcgtcgtgttttcaatagattcattgag 1657
Score = 85.7 bits (43), Expect(2) = 2e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 accaattccaccagttatgccaccagcaggtaaagcaccatgg 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 accaattccaccagttatgccaccagcaggtaaagcaccatgg 1309
Score = 38.2 bits (19), Expect(2) = 2e-18
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 gatattattacaagttctt 67
|||||||||||||||||||
Sbjct: 1313 gatattattacaagttctt 1331
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 19,444,275
Number of Sequences: 30679270
Number of extensions: 19444275
Number of successful extensions: 1437524
Number of sequences better than 10.0: 66
length of query: 910
length of database: T,251,742,201
effective HSP length: 22
effective length of query: 888
effective length of database: S,576,798,261
effective search space: 31592196855768
effective search space used: 31592196855768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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