Homology FC-IC0228 vs Protein
Query= FC-IC0228 (FC-IC0228Q) /CSM/FC-IC/FC-IC0228Q.Seq.d/
(1573 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717 pro... 58 2e-06
AK292863_1(AK292863|pid:none) Homo sapiens cDNA FLJ76193 complet... 58 2e-06
BC148035_1(BC148035|pid:none) Bos taurus Rho-related BTB domain ... 57 4e-06
CR859023_1(CR859023|pid:none) Pongo abelii mRNA; cDNA DKFZp469P2... 56 7e-06
BC026836_1(BC026836|pid:none) Mus musculus Rho-related BTB domai... 55 9e-06
AB385392_1(AB385392|pid:none) Synthetic construct DNA, clone: pF... 55 1e-05
AK122354_1(AK122354|pid:none) Mus musculus mRNA for mKIAA0717 pr... 55 1e-05
AF420001_1(AF420001|pid:none) Mus musculus DBC2 protein (Dbc2) m... 55 1e-05
AB020685_1(AB020685|pid:none) Homo sapiens mRNA for KIAA0878 pro... 55 1e-05
AK171295_1(AK171295|pid:none) Mus musculus NOD-derived CD11c +ve... 55 1e-05
BC041337_1(BC041337|pid:none) Homo sapiens Rho-related BTB domai... 55 1e-05
(O94844) RecName: Full=Rho-related BTB domain-containing protein... 55 1e-05
BC144800_1(BC144800|pid:none) Mus musculus Rho-related BTB domai... 54 2e-05
CR858863_1(CR858863|pid:none) Pongo abelii mRNA; cDNA DKFZp469P1... 54 2e-05
(Q9DAK3) RecName: Full=Rho-related BTB domain-containing protein... 54 2e-05
AK173015_1(AK173015|pid:none) Mus musculus premature mRNA for mK... 54 2e-05
AK005770_1(AK005770|pid:none) Mus musculus adult male testis cDN... 54 2e-05
(Q9CTN4) RecName: Full=Rho-related BTB domain-containing protein... 53 4e-05
AK129234_1(AK129234|pid:none) Mus musculus mRNA for mKIAA0878 pr... 53 4e-05
FQ310506_541(FQ310506|pid:none) Dicentrarchus labrax chromosome ... 53 4e-05
JI861809_1(JI861809|pid:none) TSA: Capra hircus 8214.1.Cahikidne... 51 2e-04
AC117082_9(AC117082|pid:none) Dictyostelium discoideum chromosom... 49 0.001
HB815236_1(HB815236|pid:none) Sequence 164450 from Patent EP2090... 47 0.002
BX649610_1(BX649610|pid:none) Zebrafish DNA sequence from clone ... 45 0.009
(P0C7A6) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 45 0.009
AE014296_3770(AE014296|pid:none) Drosophila melanogaster chromos... 44 0.020
AF221547_1(AF221547|pid:none) Drosophila melanogaster RhoGTPase ... 44 0.020
AF033623_1(AF033623|pid:none) Ovis aries putative heparan sulfat... 44 0.026
BX784028_1(BX784028|pid:none) Zebrafish DNA sequence from clone ... 44 0.034
(Q9ZVC2) RecName: Full=Regulatory protein NPR5; AltName: Full=BT... 43 0.045
(Q1LVW0) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 43 0.045
BX649350_1(BX649350|pid:none) Zebrafish DNA sequence from clone ... 43 0.045
AL928936_1(AL928936|pid:none) Zebrafish DNA sequence from clone ... 43 0.045
BT002986_1(BT002986|pid:none) Arabidopsis thaliana clone RAFL15-... 43 0.045
DQ450955_1(DQ450955|pid:none) Oryza sativa (japonica cultivar-gr... 43 0.058
BC006756_1(BC006756|pid:none) Mus musculus ankyrin repeat and BT... 42 0.076
(O08764) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 42 0.076
AB173763_1(AB173763|pid:none) Macaca fascicularis brain cDNA clo... 42 0.100
BC141145_1(BC141145|pid:none) Mus musculus BTB (POZ) domain cont... 42 0.13
AK044022_1(AK044022|pid:none) Mus musculus 10 days neonate corte... 42 0.13
BC072592_1(BC072592|pid:none) Mus musculus BTB (POZ) domain cont... 42 0.13
AK039038_1(AK039038|pid:none) Mus musculus adult male hypothalam... 42 0.13
AK018115_1(AK018115|pid:none) Mus musculus adult male medulla ob... 42 0.13
AK091560_1(AK091560|pid:none) Homo sapiens cDNA FLJ34241 fis, cl... 41 0.17
(A6QL63) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 41 0.17
BT039266_1(BT039266|pid:none) Zea mays full-length cDNA clone ZM... 41 0.17
BC084274_1(BC084274|pid:none) Xenopus laevis hypothetical LOC495... 41 0.17
AK127012_1(AK127012|pid:none) Homo sapiens cDNA FLJ45068 fis, cl... 41 0.17
CR860715_1(CR860715|pid:none) Pongo abelii mRNA; cDNA DKFZp459O0... 41 0.17
AY373588_1(AY373588|pid:none) Homo sapiens ANK-repeat BTB domain... 41 0.17
(Q8N961) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 41 0.17
AK128445_1(AK128445|pid:none) Homo sapiens cDNA FLJ46588 fis, cl... 41 0.17
CP001159_136(CP001159|pid:none) Thalassiosira pseudonana CCMP133... 41 0.17
AK355716_1(AK355716|pid:none) Hordeum vulgare subsp. vulgare mRN... 40 0.49
AL606921_1(AL606921|pid:none) Mouse DNA sequence from clone RP23... 39 0.84
(Q8CII0) RecName: Full=Zinc finger and BTB domain-containing pro... 39 0.84
AK132152_1(AK132152|pid:none) Mus musculus 14, 17 days embryo he... 39 0.84
AK228073_1(AK228073|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.84
CP002686_6025(CP002686|pid:none) Arabidopsis thaliana chromosome... 39 1.1
AK367450_1(AK367450|pid:none) Hordeum vulgare subsp. vulgare mRN... 39 1.1
FP671138_274(FP671138|pid:none) Mycoplasma agalactiae 5632 chrom... 39 1.1
BC059036_1(BC059036|pid:none) Mus musculus BTB (POZ) domain cont... 39 1.1
AJ720925_1(AJ720925|pid:none) Gallus gallus mRNA for hypothetica... 39 1.1
BC101561_1(BC101561|pid:none) Homo sapiens BTB (POZ) domain cont... 38 1.4
(Q8NAP8) RecName: Full=Zinc finger and BTB domain-containing pro... 38 1.4
AK317640_1(AK317640|pid:none) Arabidopsis thaliana AT5G19330 mRN... 38 1.4
AK357951_1(AK357951|pid:none) Hordeum vulgare subsp. vulgare mRN... 38 1.9
AK360591_1(AK360591|pid:none) Hordeum vulgare subsp. vulgare mRN... 38 1.9
AP003633_29(AP003633|pid:none) Oryza sativa Japonica Group genom... 38 1.9
JN180856_1(JN180856|pid:none) Medicago truncatula cultivar R108 ... 38 1.9
AP008217_208(AP008217|pid:none) Oryza sativa (japonica cultivar-... 37 2.5
EU969827_1(EU969827|pid:none) Zea mays clone 336160 unknown mRNA. 37 2.5
FQ378032_67(FQ378032|pid:none) Oryza brachyantha chromosome 11. 37 2.5
EU410304_250(EU410304|pid:none) Vaccinia virus GLV-1h68, complet... 37 2.5
CP000152_440(CP000152|pid:none) Burkholderia sp. 383, complete s... 37 3.2
JN408495_1(JN408495|pid:none) Lotus japonicus BTB/POZ ankyrin re... 37 3.2
HQ288144_1(HQ288144|pid:none) Hottentotta judaicus clone Hj0079 ... 37 3.2
FJ532056_1(FJ532056|pid:none) Brassica rapa subsp. pekinensis NP... 37 3.2
JN180860_1(JN180860|pid:none) Pisum sativum cultivar Parvus BTB/... 37 4.2
BC155152_1(BC155152|pid:none) Danio rerio zgc:110075, mRNA (cDNA... 37 4.2
BC092719_1(BC092719|pid:none) Danio rerio zgc:110075, mRNA (cDNA... 37 4.2
BC042246_1(BC042246|pid:none) Xenopus laevis BTB/POZ and zinc-fi... 37 4.2
AM427664_1(AM427664|pid:none) Vitis vinifera contig VV78X250604.... 37 4.2
JN180865_1(JN180865|pid:none) Pisum sativum cultivar SGE BTB/POZ... 37 4.2
JN180862_1(JN180862|pid:none) Pisum sativum cultivar Paloma BTB/... 37 4.2
AP004183_11(AP004183|pid:none) Oryza sativa Japonica Group genom... 37 4.2
BC005253_1(BC005253|pid:none) Homo sapiens kelch-like 20 (Drosop... 36 5.5
CR954214_345(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 36 5.5
(D3Z8N4) RecName: Full=Kelch-like protein 20; &(Q08DK3) RecName... 36 5.5
DQ121394_178(DQ121394|pid:none) Vaccinia virus strain Lister clo... 36 5.5
FR823386_206(FR823386|pid:none) Neospora caninum Liverpool compl... 36 5.5
AB026190_1(AB026190|pid:none) Homo sapiens mRNA for Kelch motif ... 36 5.5
AK100472_1(AK100472|pid:none) Oryza sativa Japonica Group cDNA c... 36 5.5
BC043960_1(BC043960|pid:none) Xenopus laevis hypothetical protei... 36 5.5
AB171139_1(AB171139|pid:none) Macaca fascicularis brain cDNA clo... 36 5.5
(Q8VCK5) RecName: Full=Kelch-like protein 20; AltName: Full=Kelc... 36 5.5
AK053371_1(AK053371|pid:none) Mus musculus 0 day neonate eyeball... 36 5.5
AE001362_184(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.5
(Q5ZKD9) RecName: Full=Kelch-like protein 20; &AJ720145_1(AJ720... 36 5.5
AC132492_6(AC132492|pid:none) Oryza sativa (japonica cultivar-gr... 36 5.5
CP002160_1979(CP002160|pid:none) Clostridium cellulovorans 743B,... 36 7.1
BC167385_1(BC167385|pid:none) Xenopus tropicalis cDNA clone MGC:... 36 7.1
AC140916_9(AC140916|pid:none) Medicago truncatula clone mth2-12b... 36 7.1
CP001820_52(CP001820|pid:none) Veillonella parvula DSM 2008, com... 36 7.1
AY074524_1(AY074524|pid:none) Arabidopsis thaliana unknown prote... 36 7.1
T15442(T15442)hypothetical protein C07D10.2 - Caenorhabditis ele... 36 7.1
(B7U179) RecName: Full=ARMADILLO BTB ARABIDOPSIS PROTEIN 1; ... 36 7.1
JI164394_1(JI164394|pid:none) TSA: Ascaris suum ASCF_417_5100 mR... 36 7.1
AY678275_240(AY678275|pid:none) Vaccinia virus strain LC16m8, co... 36 7.1
EF087879_1(EF087879|pid:none) Picea sitchensis clone WS02815_I02... 36 7.1
GU591327_69(GU591327|pid:none) Durinskia baltica strain CS-38 ch... 35 9.3
(Q4L7C9) RecName: Full=Phosphoenolpyruvate carboxykinase [ATP]; ... 35 9.3
HQ407377_179(HQ407377|pid:none) Cowpox virus strain Austria 1999... 35 9.3
(O72736) RecName: Full=Kelch repeat and BTB domain-containing pr... 35 9.3
CP000153_201(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 35 9.3
(Q54BA2) RecName: Full=Ankyrin repeat, bromo and BTB domain-cont... 35 9.3
>AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717 protein,
partial cds.
Length = 751
Score = 57.8 bits (138), Expect = 2e-06
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Frame = +1
Query: 1069 VTIKPNEKNDDGTKSSGEFVEISIDSSINRRVFNRFIEFLYTGVLNYLDKNDQ-LQETIA 1245
V+I+ D T S V + +DSSI F +++LYTG L D+N++ L
Sbjct: 418 VSIQEEMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTGEL---DENERDLMHIAH 474
Query: 1246 LAESVGFKYLASACKNVLGGNEDLNPSIGTFLNDQLGETSKELFFTKKILSDIQFIVEGR 1425
+AE + L N+L +N I + + KE K SD+ FI++
Sbjct: 475 IAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECL-AKGTFSDVTFILDDG 533
Query: 1426 SIFAHKALIFSRSNVVNALIGRNFIEREGKVEMSDDVTFDSFMAILEYL 1572
+I AHK L+ S + + A+ G F+E + + + A+LEYL
Sbjct: 534 TISAHKPLLISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYL 582
Score = 46.2 bits (108), Expect = 0.005
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +2
Query: 278 VTIKPNEKNDDGTKSSGEFVEISIDSSINRRVFNRFIEFLYTGVLNYLDKNDQ-LQETIA 454
V+I+ D T S V + +DSSI F +++LYTG LD+N++ L
Sbjct: 418 VSIQEEMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTG---ELDENERDLMHIAH 474
Query: 455 LAESVGFKYLASACKNVLGGNEDLNPSIGTFLNDQLGETSKELFFTKKILSDIQFIVEGR 634
+AE + L N+L +N I + + KE K SD+ FI++
Sbjct: 475 IAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKEC-LAKGTFSDVTFILDDG 533
Query: 635 SIFAHKALIFS 667
+I AHK L+ S
Sbjct: 534 TISAHKPLLIS 544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 4,062,089,906
Number of extensions: 83257135
Number of successful extensions: 215468
Number of sequences better than 10.0: 116
Number of HSP's gapped: 215208
Number of HSP's successfully gapped: 180
Length of query: 524
Length of database: 1,732,582,204
Length adjustment: 137
Effective length of query: 387
Effective length of database: 999,740,023
Effective search space: 386899388901
Effective search space used: 386899388901
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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