Dictyostelium discoideum cDNA Clone FC-IC0228

Sequence FC-IC0228

ACCAATTCCA CCAGTTATGC CACCAGCAGG TAAAGCACCA TGGATTGATA
TTATTACAAG TTCTTATGAT AAAGAGATGA GAGAAACATT AAATAGTGAA
TCATTTAGTG ATGTTAAATT TACATTTTTT GAAGAGAGAC CAGTTTATGC
ACATCGTGTT ATATTATGCT CAGCATCTGA ATTCTTTAGA AGGGTATTTG
GATACACATT ATCCTCTGAC CAAGCTGAGT TCAAATTGGA TGATTTAAAT
GAGGGTAAGG TTAAAAATAT TCGTAGTGTT ACAATTAAAC CAAACGAAAA
GAATGATGAC GGCACTAAAT CAAGTGGTGA ATTTGTCGAG ATCTCAATCG
ACAGTTCAAT AAATCGTCGT GTTTTCAATA GATTCATTGA GTTTCTTTAC
ACTGGTGTGT TGAATTACCT TGATAAGAAT GACCAACTTC AAGAGACAAT
TGCATTGGCA GAGAGTGTCG GCTTCAAGTA TTTAGCAAGT GCTTGTAAGA
ATGTGTTGGG TGGTAATGAA GATTTGAATC CATCGATTGG CACTTTCTTA
AATGACCAAT TGGGTGAAAC TAGTAAAGAG CTATTCTTTA CTAAAAAGAT
TCTATCTGAT ATTCAATTCA TCGTTGAAGG CAGATCAATT TTTGCACATA
AAGCATTGAT TTTCTCACGT TCAATGTTGT AAATGCGCTN ATTGGTAGAA
ATTTCATTGA AAGAGAAGCA AGGTGAATGT CTGATGATGT ACTTTTGATT
CATTCATGGC GATTTTAGAA ATTTG----- -----CGAGG TACCAATTCC
ACCAGTTATG CCACCAGCAG GTAAAGCACC ATGGATTGAT ATTATTACAA
GTTCTTATGA TAAAGAGATG AGAGAACCAT TAAATAGTGA ATCATTTAGT
GATGTTAAAT TTACATTTTT TGAAGAGAGA CCAGTTTATG CACATCGTGT
TATATTATGC TCAGCATCTG AATTCTTTAG AAGGGTATTT GGATACACAT
TATCCTCTGA CCAAGCTGAG TTCAAATTGG ATGATTTAAA TGAGGGTAAG
GTTAAAAATA TTCGTAGTGT TACAATTAAA CCAAACGAAA AGAATGATGA
CGGCACTAAA TCAAGTGGTG AATTTGTCGA GATCTCAATC GACAGTTCAA
TAAATCGTCG TGTTTTCAAT AGATTCATTG AGTTTCTTTA CACTGGTGTG
TTGAATTACC TTGATAAGAA TGACCAACTT CAAGAGACAA TTGCATTGGC
AGAGAGTGTC GGCTTCAAGT ATTTAGCAAG TGCTTGTAAG AATGTGTTGG
GTGGTAATGA AGATTTGAAT CCATCGATTG GCACTTTCTT AAATGACCAA
TTGGGTGAAA CTAGTAAAGA GCTATTCTTT ACTAAAAAGA TTCTATCTGA
TATTCAATTC ATCGTTGAAG GCAGATCAAT TTTTGCACAT AAAGCATTGA
TTTTCTCACG TTCAAATGTT GTAAATGCGC TAATTGGTAG AAATTTCATT
GAAAGAGAAG GCAAGGTTGA AATGTCTGAT GATGTAACTT TTGATTCATT
CATGGCGATT TTAGAATATT TGT

Translated Amino Acid Sequence FC-IC0228

qfhqlchqqvkhhglillqvlmikr*ekh*ivnhlvmlnlhflkrdqfmhivlyyaqhln
slegyldthypltklssnwmi*mrvrlkifvvlqlnqtkrmmtalnqvvnlsrsqstvq*
ivvfsidslsfftlvc*itlirmtnfkrqlhwqrvsassi*qvlvrmcwvvmki*ihrla
ls*mtnwvklvksysllkrfylifnsslkadqflhikh*fshvqcckcaxw*kfh*krsk
vnv**CTFDSFMAILEI---

---EVPIPPVMPPAGKAPWIDIITSSYDKEMREPLNSESFSDVKFTFFEERPVYAHRVIL
CSASEFFRRVFGYTLSSDQAEFKLDDLNEGKVKNIRSVTIKPNEKNDDGTKSSGEFVEIS
IDSSINRRVFNRFIEFLYTGVLNYLDKNDQLQETIALAESVGFKYLASACKNVLGGNEDL
NPSIGTFLNDQLGETSKELFFTKKILSDIQFIVEGRSIFAHKALIFSRSNVVNALIGRNF
IEREGKVEMSDDVTFDSFMAILEYL

Homology FC-IC0228 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-IC0228 (FC-IC0228Q) /CSM/FC-IC/FC-IC0228Q.Seq.d/                  3053   0.0
FC-IC1620 (FC-IC1620Q) /CSM/FC-IC/FC-IC1620Q.Seq.d/                  1522   0.0
FC-IC1572 (FC-IC1572Q) /CSM/FC-IC/FC-IC1572Q.Seq.d/                  1515   0.0
FC-IC0242 (FC-IC0242Q) /CSM/FC-IC/FC-IC0242Q.Seq.d/                  1515   0.0
FC-IC1196 (FC-IC1196Q) /CSM/FC-IC/FC-IC1196Q.Seq.d/                  1489   0.0
FC-IC0284 (FC-IC0284Q) /CSM/FC-IC/FC-IC0284Q.Seq.d/                  1479   0.0
FC-IC0621 (FC-IC0621Q) /CSM/FC-IC/FC-IC0621Q.Seq.d/                  1467   0.0
FC-IC1197 (FC-IC1197Q) /CSM/FC-IC/FC-IC1197Q.Seq.d/                  1459   0.0
FC-IC0027 (FC-IC0027Q) /CSM/FC-IC/FC-IC0027Q.Seq.d/                  1114   0.0
FC-IC0005 (FC-IC0005Q) /CSM/FC-IC/FC-IC0005Q.Seq.d/                   775   0.0

Homology FC-IC0228 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gen...  1546   0.0    4
CG110013|CG110013.1 PUIMI40TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.030  2
CC433814|CC433814.1 PUHOU87TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.043  2
CG111380|CG111380.1 PUFRH74TD ZM_0.6_1.0_KB Zea mays genomic...    38   0.044  2
AC068649|AC068649.18 Homo sapiens chromosome 12 clone RP11-3...    36   0.22   11
BW128099|BW128099.1 Ciona intestinalis cDNA, clone:rcign016n...    36   0.51   2
AC016406|AC016406.2 Homo sapiens clone RP11-45L18, LOW-PASS ...    36   0.88   7
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 ma...    36   1.0    14
AE006338|AE006338.1 Lactococcus lactis subsp. lactis IL1403 ...    42   1.3    3
AC116507|AC116507.3 Mus musculus clone RP24-309C17, WORKING ...    46   1.5    1

Homology FC-IC0228 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB018260_1(AB018260|pid:none) Homo sapiens mRNA for KIAA0717 pro...    58   2e-06
AK292863_1(AK292863|pid:none) Homo sapiens cDNA FLJ76193 complet...    58   2e-06
BC148035_1(BC148035|pid:none) Bos taurus Rho-related BTB domain ...    57   4e-06
CR859023_1(CR859023|pid:none) Pongo abelii mRNA; cDNA DKFZp469P2...    56   7e-06
BC026836_1(BC026836|pid:none) Mus musculus Rho-related BTB domai...    55   9e-06
AB385392_1(AB385392|pid:none) Synthetic construct DNA, clone: pF...    55   1e-05
AK122354_1(AK122354|pid:none) Mus musculus mRNA for mKIAA0717 pr...    55   1e-05
AF420001_1(AF420001|pid:none) Mus musculus DBC2 protein (Dbc2) m...    55   1e-05
AB020685_1(AB020685|pid:none) Homo sapiens mRNA for KIAA0878 pro...    55   1e-05
AK171295_1(AK171295|pid:none) Mus musculus NOD-derived CD11c +ve...    55   1e-05

Homology FC-IC0228 vs Genome