Homology FC-IC0043 vs DNA
Query= FC-IC0043 (FC-IC0043Q) /CSM/FC-IC/FC-IC0043Q.Seq.d/
/CSM/FC-IC/FC-IC0043Q.Seq.d/
(355 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,356,425 sequences; S,971,923,061 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AW724145|AW724145.1 f4b06nm.f2 Neurospora crassa morning cDN... 52 1e-07 2
AW724144|AW724144.1 f4b06nm.f1 Neurospora crassa morning cDN... 52 1e-07 2
AW715373|AW715373.1 g4b02nm.f1 Neurospora crassa morning cDN... 52 1e-07 2
CF194761|CF194761.1 m5m23b3.r1 Cryptococcus neoformans strai... 44 4e-05 3
CD116259|CD116259.1 ME1-0038P-A145-H11-U.B ME1-0038 Schistos... 58 8e-05 1
CD163190|CD163190.1 ML1-0082U-V216-B10-U.B ML1-0082 Schistos... 58 8e-05 1
CD183694|CD183694.1 MS1-0038U-A290-H01-U.B MS1-0038 Schistos... 58 8e-05 1
BF936994|BF936994.1 EST460049 Schistosoma mansoni female, Ph... 58 8e-05 1
CD170044|CD170044.1 MS1-0002T-L205-C06-U.B MS1-0002 Schistos... 58 8e-05 1
CD137635|CD137635.1 MG1-0048U-A216-G02-U.B MG1-0048 Schistos... 58 8e-05 1
CD145566|CD145566.1 MG1-0105U-A350-B05-U.B MG1-0105 Schistos... 58 8e-05 1
CF190373|CF190373.1 k8e01j2.f1 Cryptococcus neoformans strai... 44 3e-04 2
CF194828|CF194828.1 n1c23b3.f1 Cryptococcus neoformans strai... 44 3e-04 2
CF188528|CF188528.1 k2g22j2.f1 Cryptococcus neoformans strai... 44 3e-04 2
BG586002|BG586002.1 EST487767 MHAM Medicago truncatula/Glomu... 40 0.001 2
BM815200|BM815200.1 EST593294 BNIR Medicago truncatula/Meloi... 40 0.001 2
CD851895|CD851895.1 DH0ALL20ZA09ZZM1 HaDevR5 Helianthus annu... 54 0.001 1
BU237871|BU237871.1 Hy_ad_01D10_M13R Hydractinia sp. from Of... 36 0.004 2
CF194760|CF194760.1 m5m23b3.f1 Cryptococcus neoformans strai... 44 0.005 2
CD096030|CD096030.1 ME1-0006T-L150-A06-U.B ME1-0006 Schistos... 50 0.020 1
AU220503|AU220503.1 Caenorhabditis elegans cDNA clone:yk890d... 46 0.31 1
BJ146080|BJ146080.1 Caenorhabditis elegans cDNA clone:yk1228... 46 0.31 1
AU210577|AU210577.1 Caenorhabditis elegans cDNA clone:yk761a... 46 0.31 1
BJ147338|BJ147338.1 Caenorhabditis elegans cDNA clone:yk1249... 46 0.31 1
BJ144165|BJ144165.1 Caenorhabditis elegans cDNA clone:yk1204... 46 0.31 1
BJ152479|BJ152479.1 Caenorhabditis elegans cDNA clone:yk1307... 46 0.31 1
C46775|C46775.1 C.elegans cDNA clone yk424e6 : 5' end, singl... 46 0.31 1
BJ129505|BJ129505.1 Caenorhabditis elegans cDNA clone:yk1031... 46 0.31 1
U08102|U08102.1 Caenorhabditis elegans putative RNA helicase... 46 0.31 1
AU216572|AU216572.1 Caenorhabditis elegans cDNA clone:yk839e... 46 0.31 1
BJ151941|BJ151941.1 Caenorhabditis elegans cDNA clone:yk1301... 46 0.31 1
Z54327|Z54327.1 Caenorhabditis elegans cosmid C26D10. 46 0.31 1
BJ150972|BJ150972.1 Caenorhabditis elegans cDNA clone:yk1290... 46 0.31 1
CD119988|CD119988.1 ME1-0060T-D082-A07-U.G ME1-0060 Schistos... 46 0.31 1
CB404676|CB404676.1 OSTR026F6_1 AD-wrmcDNA Caenorhabditis el... 46 0.31 1
BJ150335|BJ150335.1 Caenorhabditis elegans cDNA clone:yk1097... 46 0.31 1
BJ148605|BJ148605.1 Caenorhabditis elegans cDNA clone:yk1265... 46 0.31 1
BJ145261|BJ145261.1 Caenorhabditis elegans cDNA clone:yk1216... 46 0.31 1
BJ136380|BJ136380.1 Caenorhabditis elegans cDNA clone:yk1112... 46 0.31 1
BJ135661|BJ135661.1 Caenorhabditis elegans cDNA clone:yk1103... 46 0.31 1
AU218750|AU218750.1 Caenorhabditis elegans cDNA clone:yk868f... 46 0.31 1
AC116532|AC116532.2 Homo sapiens chromosome 11 clone RP11-28... 36 1.1 2
AL022098|AL022098.1 Human DNA sequence from clone RP3-510L9 ... 44 1.2 1
AL832268|AL832268.1 Homo sapiens mRNA; cDNA DKFZp667N1617 (f... 44 1.2 1
BU718782|BU718782.1 SJM2CNC09 SJM Schistosoma japonicum cDNA... 44 1.2 1
BU796603|BU796603.1 SJF2EEA12 SJF Schistosoma japonicum cDNA... 44 1.2 1
BU718834|BU718834.1 SJM2CNH03 SJM Schistosoma japonicum cDNA... 44 1.2 1
Z82211|Z82211.1 Human DNA sequence from clone RP3-447N6 on c... 42 2.7 2
AL139397|AL139397.8 Human DNA sequence from clone RP11-445O1... 42 2.8 2
AV555536|AV555536.1 Arabidopsis thaliana cDNA clone:SQ017e09... 38 3.4 2
AV563826|AV563826.1 Arabidopsis thaliana cDNA clone:SQ194b03... 38 3.4 2
AV785046|AV785046.1 Arabidopsis thaliana cDNA clone:RAFL06-1... 38 4.4 2
AC146240|AC146240.1 Pan troglodytes chromosome UNK clone RP4... 42 4.9 1
AL772194|AL772194.6 Mouse DNA sequence from clone RP23-331M1... 42 4.9 1
AC147497|AC147497.2 Medicago truncatula clone mth2-138p6, WO... 42 4.9 1
AC091021|AC091021.8 Homo sapiens chromosome 18, clone RP11-7... 42 4.9 1
AC021788|AC021788.5 Homo sapiens chromosome 5 clone RP11-215... 42 4.9 1
CA796380|CA796380.1 Cac_BL_3394 Cac_BL (Bean and Leaf from A... 42 4.9 1
CA795540|CA795540.1 Cac_BL_2570 Cac_BL (Bean and Leaf from A... 42 4.9 1
CA796328|CA796328.1 Cac_BL_3339 Cac_BL (Bean and Leaf from A... 42 4.9 1
AP002410|AP002410.1 Homo sapiens genomic DNA, chromosome 18q... 42 4.9 1
BM161051|BM161051.1 EST563574 PyBS Plasmodium yoelii yoelii ... 42 4.9 1
CA796005|CA796005.1 Cac_BL_3017 Cac_BL (Bean and Leaf from A... 42 4.9 1
CA795895|CA795895.1 Cac_BL_2914 Cac_BL (Bean and Leaf from A... 42 4.9 1
AC006146|AC006146.2 Homo sapiens PAC clone RP4-693M11 from 1... 42 4.9 1
AC008885|AC008885.5 Homo sapiens chromosome 5 clone CTD-2218... 42 4.9 1
CA796477|CA796477.1 Cac_BL_3497 Cac_BL (Bean and Leaf from A... 42 4.9 1
CA795812|CA795812.1 Cac_BL_2834 Cac_BL (Bean and Leaf from A... 42 4.9 1
AC108003|AC108003.2 Homo sapiens chromosome 8 clone CTD-2337... 42 4.9 1
AL109852|AL109852.13 Human DNA sequence from clone RP5-1178I... 42 4.9 1
BZ023186|BZ023186.1 oeh63d12.b1 B.oleracea002 Brassica olera... 42 4.9 1
AB001684|AB001684.1 Chlorella vulgaris C-27 chloroplast DNA,... 32 6.9 6
BT001052|BT001052.1 Arabidopsis thaliana At5g11170/F2I11_60 ... 38 7.8 2
BU644931|BU644931.2 mgns017xE16f.b Magnaporthe grisea NS Uni... 34 9.4 2
AJ010466|AJ010466.1 Arabidopsis thaliana mRNA for DEAD box R... 38 9.7 2
AJ428513|AJ428513.1 Chironomus tentans mRNA for HEL protein. 36 9.7 2
AE015540|AE015540.1 Shewanella oneidensis MR-1 section 89 of... 30 9.9 2
AC010359|AC010359.5 Homo sapiens chromosome 5 clone CTD-2033... 40 19 1
AC095135|AC095135.10 Rattus norvegicus clone CH230-8C1, WORK... 40 19 1
AC096659|AC096659.1 Homo sapiens BAC clone RP11-45I20 from 4... 40 19 1
AC068324|AC068324.8 Arabidopsis thaliana chromosome 1 BAC F1... 40 19 1
AC146950|AC146950.1 Zea mays clone ZMMBBc0464F01, WORKING DR... 40 19 1
AC095372|AC095372.4 Rattus norvegicus clone CH230-1K14, WORK... 40 19 1
AC009501|AC009501.4 Homo sapiens BAC clone RP11-511I11 from ... 40 19 1
AC026757|AC026757.12 Arabidopsis thaliana chromosome 1 BAC F... 40 19 1
AC084201|AC084201.10 Mus musculus chromosome 7 clone RP23-41... 40 19 1
CE684871|CE684871.1 tigr-gss-dog-17000314527177 Dog Library ... 40 19 1
BZ499664|BZ499664.1 BONJJ89TR BO_1.6_2_KB_tot Brassica olera... 40 19 1
AC064859|AC064859.6 Homo sapiens BAC clone RP11-329A6 from 2... 40 19 1
AC095457|AC095457.6 Rattus norvegicus clone CH230-7J3, WORKI... 40 19 1
BZ710917|BZ710917.1 OGDAK05TM ZM_0.7_1.5_KB Zea mays genomic... 40 19 1
CE367982|CE367982.1 tigr-gss-dog-17000362029539 Dog Library ... 40 19 1
CE128840|CE128840.1 tigr-gss-dog-17000326051723 Dog Library ... 40 19 1
AC105790|AC105790.3 Rattus norvegicus clone CH230-252D23, **... 40 19 1
CE046822|CE046822.1 tigr-gss-dog-17000357080529 Dog Library ... 40 19 1
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma... 40 19 1
R04448|R04448.1 pk23g05.s1 Kuwabara Mixed stage C. briggsae ... 40 19 1
>AW724145|AW724145.1 f4b06nm.f2 Neurospora crassa morning cDNA
library Neurospora crassa cDNA clone f4b06nm 5', mRNA
sequence.
Length = 465
Score = 52.0 bits (26), Expect(2) = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 60 gtagttgatgacgacattgacacgttcaatatcgataccacgaccaaaga 109
|||||||||| ||| |||| ||||| ||||||||||||||||||||||
Sbjct: 199 gtagttgatggcgaggttgatgcgttcgatatcgataccacgaccaaaga 150
Score = 34.2 bits (17), Expect(2) = 1e-07
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 5 aaacgaccagcacgacc 21
|||||||||||||||||
Sbjct: 255 aaacgaccagcacgacc 239
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 6,039,626
Number of Sequences: 30356425
Number of extensions: 6039626
Number of successful extensions: 493721
Number of sequences better than 10.0: 277
length of query: 355
length of database: S,971,923,061
effective HSP length: 22
effective length of query: 333
effective length of database: S,304,081,711
effective search space: 11756259209763
effective search space used: 11756259209763
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home