Homology FC-IC0027 vs DNA
Query= FC-IC0027 (FC-IC0027Q) /CSM/FC-IC/FC-IC0027Q.Seq.d/
/CSM/FC-IC/FC-IC0027Q.Seq.d/
(588 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,356,425 sequences; S,971,923,061 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gen... 1114 0.0 1
AL445563|AL445563.1 Mycoplasma pulmonis (strain UAB CTIP) co... 36 0.003 10
AC090141|AC090141.9 Homo sapiens chromosome 8, clone RP11-14... 40 0.043 4
AL139157|AL139157.10 Human DNA sequence *** SEQUENCING CANCE... 36 1.8 6
AC145932|AC145932.2 Gallus gallus chromosome UNK clone CH261... 44 2.1 1
AC017095|AC017095.7 Homo sapiens BAC clone RP11-516C4 from 2... 44 2.1 1
AC027493|AC027493.3 Homo sapiens chromosome 3 clone RP11-585... 32 2.3 8
AL138714|AL138714.9 Human DNA sequence from clone RP11-121J7... 38 2.8 5
M69197|M69197.1 Human haptoglobin and haptoglobin-related pr... 36 5.6 3
AC006228|AC006228.5 Genomic sequence for Arabidopsis thalian... 38 6.0 4
AC022764|AC022764.4 Homo sapiens chromosome 17 clone RP11-31... 36 6.1 5
AC136164|AC136164.1 Rattus norvegicus clone CH230-401K22, **... 34 6.7 5
AZ705242|AZ705242.1 RPCI-23-236E2.TJ RPCI-23 Mus musculus ge... 32 6.9 2
AC005509|AC005509.1 Homo sapiens chromosome 4 clone B200N5 m... 42 8.3 1
AC113110|AC113110.16 Mus musculus chromosome 16 clone RP23-3... 42 8.3 1
AL627445|AL627445.21 Mouse DNA sequence from clone RP23-81D2... 42 8.3 1
AC009455|AC009455.9 Homo sapiens chromosome 18, clone RP11-1... 42 8.3 1
AZ494486|AZ494486.1 1M0329K16R Mouse 10kb plasmid UUGC1M lib... 42 8.3 1
AC022100|AC022100.7 Homo sapiens chromosome 5 clone CTB-66A9... 42 8.3 1
AC032012|AC032012.4 Mus musculus chromosome 11 clone RP23-23... 42 8.3 1
BF007376|BF007376.1 1476844 Amblyomma americanum adult Lambd... 42 8.3 1
AC103951|AC103951.7 Homo sapiens chromosome 18, clone RP11-1... 42 8.3 1
BE055442|BE055442.2 GA__Ea0005H01f Gossypium arboreum 7-10 d... 42 8.3 1
AC114580|AC114580.3 Mus musculus clone RP23-163P4, WORKING D... 42 8.3 1
AC090168|AC090168.3 Homo sapiens chromosome 18 clone RP11-12... 42 8.3 1
>AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gene,
complete cds.
Length = 3457
Score = 1114 bits (562), Expect = 0.0
Identities = 574/578 (99%)
Strand = Plus / Minus
Query: 1 acaaatattctaaaatcgccttgaatgaatcaaaagtttcatcagcagacatttcaacct 60
|||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 2048 acaaatattctaaaatcgccatgaatgaatcaaaagttacatcatcagacatttcaacct 1989
Query: 61 tgccttctctttcaatgaaatttctaccaattagcgcatttacaacatttgaacgtgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 tgccttctctttcaatgaaatttctaccaattagcgcatttacaacatttgaacgtgaga 1929
Query: 121 taatcaatgctttatgtgcaaaaattgatctgccttcaacgatgaattgaatatcagata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1928 aaatcaatgctttatgtgcaaaaattgatctgccttcaacgatgaattgaatatcagata 1869
Query: 181 gaatctttttagtaaagaatagctctttactagtttcacccaattggtcatttaagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1868 gaatctttttagtaaagaatagctctttactagtttcacccaattggtcatttaagaaag 1809
Query: 241 tgccaatcgatggattcaaatcttcattaccacccaacacattcttacaagcacttgcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 tgccaatcgatggattcaaatcttcattaccacccaacacattcttacaagcacttgcta 1749
Query: 301 aatacttgaagccgacactctctgccaatgcaattgtctcttgaagttggtcattcttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1748 aatacttgaagccgacactctctgccaatgcaattgtctcttgaagttggtcattcttat 1689
Query: 361 caaggtaattcaacacaccagtgtaaagaaactcaatgaatctattgaaaacacgacgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 caaggtaattcaacacaccagtgtaaagaaactcaatgaatctattgaaaacacgacgat 1629
Query: 421 ttattgaactgtcgattgagatctcgacaaattcaccacttgatttagtgccgtcatcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 ttattgaactgtcgattgagatctcgacaaattcaccacttgatttagtgccgtcatcat 1569
Query: 481 tcttttcgtttggtttaattgtaacactacgaatatttttaaccttaccctcatttaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 tcttttcgtttggtttaattgtaacactacgaatatttttaaccttaccctcatttaaat 1509
Query: 541 catccaatttgaactcagcttggtcagaggataatgtg 578
||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 catccaatttgaactcagcttggtcagaggataatgtg 1471
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 12,130,525
Number of Sequences: 30356425
Number of extensions: 12130525
Number of successful extensions: 873682
Number of sequences better than 10.0: 51
length of query: 588
length of database: S,971,923,061
effective HSP length: 22
effective length of query: 566
effective length of database: S,304,081,711
effective search space: 19982110248426
effective search space used: 19982110248426
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home