Dictyostelium discoideum cDNA Clone CHS196

Sequence CHS196

CATAATAAAT AATAATTAAA ATTTGCATAT ATAAAAGAAA TAAAAATTTT
TTATTTTTTG TAAACATATT ATTTTCTGTA AATAAATCAT ATAATTTTTC
AACATACATA TATATATATA TATTTTTAAA ATAAAATAAA ATAAAAATGT
CATTTAATCC AGAAGAATTT ACTGATAAAA CAAATACAAT TTTGTTAAGA
ACTCAAGAAT TGGCAAGAGA AAAATCAAAT GTACAATTAG CACCAATACA
TTTGGCTGTT ACATTATTAA ATGATGAAGA TAATTTAGCA AAATCTATAT
TTGAAAAAGC TGGTGGAGAT GTACCAAAAA TTGATGCTGG TTTTAAAAGA
TTATTAGCCA AACAACCTGT TCAAAATCCA GTACCACCTG AAATTTCTCC
AAATTCATTA TTTTTACAAG TTTTAAGATC AGCAGCACGT CATCAAAAGA
ATAATGGTGA TTCTCATTTA GCAGTTGACC ATTTAATATT GGGATTATTG
GATGATAGAG ATATATTATC AGTATTGGGA GATGCTGGTG CAACCAAAGA
ACAAGTTATA CAAGCAGTTA AAGAGAT--- -------AAT TGGCAAAAGC
ATTGGCATTG GAATTGTTTG ATGATGAATC TCATATGGTT AGAATTGATA
TGAGTGAATA TATGGANCAA CATTCGGTTT CTCGTTTAAT TGGTGCTCCA
CCAGGTTATG TAGGTTATGA TCAAGGTGGT CAATTAACTG AAGCCGTCAG
AAGAAGACCA TACAGTGTAG TATTGTTTGA TGAAGTTGAA AAAGCTCATC
AACAAGTTTG GAATGTTCTC TTACAAGTAT TGGATGAAGG TCGTCTTACC
GATGGTCAAG GTAGAACCGT AGATTTCTCA AATGTTGTTA TCATTATGAC
CTCAAATTTA GGTAGTCAAT ACATCCTTGG TGAACAAGCA AACAAAGAAG
GTGGTAACAA CTCTTTATCA CAAGCTTGTA AAGATAAAGT CATTGATGAA
GTTAGAAAAC ATTTCCGTCC AGAGTTTTTA AATCGTCTCG ATGATATAAT
TGTCTTTACT CCATTGAGTA AAGAAAACCT TCATAGTATT ATTACTCTTC
AATTAAGATC CGTCGAAAAG AGATTAGAAG ATCAAAATAT GTCTTTAAAG
ATTTCAAACG ATGCTTTAGA TTCAATTATC AATGCTGCAT ATGATCCAAT
CTTTGGTGGT AGACCATTGA AACGTTACAT TGAAAAGAAT ATTGTCACTG
AACTTAGTAA ACTCATCCTT GGTGGTAAAT TAAAAGAAAA TCAAGGTGTT
GTTGTCAATG AAAAAGATCA TCATCTCAAC TTTGATATTA TAGATTTAAA
ACAACAACAA CAACGTCCAG CTTCTCCAAC CAAAAAACAA AAAACTATTA
AATAAAAAAA AATAAAAAAT AA

Translated Amino Acid Sequence CHS196

**iiikiciykrnknflffvnilfsvnksynfstyiyiyiflk*NKIKMSFNPEEFTDKT
NTILLRTQELAREKSNVQLAPIHLAVTLLNDEDNLAKSIFEKAGGDVPKIDAGFKRLLAK
QPVQNPVPPEISPNSLFLQVLRSAARHQKNNGDSHLAVDHLILGLLDDRDILSVLGDAGA
TKEQVIQAVKE---

---LAKALALELFDDESHMVRIDMSEYMXQHSVSRLIGAPPGYVGYDQGGQLTEAVRRRP
YSVVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVIIMTSNLGSQYILGEQA
NKEGGNNSLSQACKDKVIDEVRKHFRPEFLNRLDDIIVFTPLSKENLHSIITLQLRSVEK
RLEDQNMSLKISNDALDSIINAAYDPIFGGRPLKRYIEKNIVTELSKLILGGKLKENQGV
VVNEKDHHLNFDIIDLKQQQQRPASPTKKQKTIK*kkikn

Homology CHS196 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CHS196 (CHS196Q) /CSM/CH/CHS1-D/CHS196Q.Seq.d/                       2381   0.0
SHJ825 (SHJ825Q) /CSM/SH/SHJ8-B/SHJ825Q.Seq.d/                       1562   0.0
CHR423 (CHR423Q) /CSM/CH/CHR4-A/CHR423Q.Seq.d/                       1560   0.0
CHH470 (CHH470Q) /CSM/CH/CHH4-C/CHH470Q.Seq.d/                       1560   0.0
SFE610 (SFE610Q) /CSM/SF/SFE6-A/SFE610Q.Seq.d/                       1552   0.0
CHR708 (CHR708Q) /CSM/CH/CHR7-A/CHR708Q.Seq.d/                       1548   0.0
CHI477 (CHI477Q) /CSM/CH/CHI4-D/CHI477Q.Seq.d/                       1544   0.0
SHL672 (SHL672Q) /CSM/SH/SHL6-C/SHL672Q.Seq.d/                       1540   0.0
SHG564 (SHG564Q) /CSM/SH/SHG5-C/SHG564Q.Seq.d/                       1540   0.0
CHL860 (CHL860Q) /CSM/CH/CHL8-C/CHL860Q.Seq.d/                       1540   0.0

Homology CHS196 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


CP000029|CP000029.1 Staphylococcus epidermidis RP62A, comple...   123   2e-32  3
AE016746|AE016746.1 Staphylococcus epidermidis ATCC 12228, s...   123   2e-32  3
AX145048|AX145048.1 Sequence 3770 from Patent WO0134809.          123   3e-32  3
AR485684|AR485684.1 Sequence 3770 from patent US 6703492.         123   3e-32  3
AF269730|AF269730.1 Staphylococcus epidermidis strain SR1 cl...   123   3e-32  3
AX143829|AX143829.1 Sequence 2551 from Patent WO0134809.          123   3e-32  3
AR484857|AR484857.1 Sequence 2551 from patent US 6703492.         123   3e-32  3
AB239684|AB239684.1 Tetragenococcus halophilus gene for ClpB...   100   9e-23  2
AZ551673|AZ551673.1 ENTGF14TF Entamoeba histolytica Sheared ...    68   3e-19  3
BX842644|BX842644.1 Mycoplasma mycoides subsp. mycoides SC g...    62   8e-18  3

Homology CHS196 vs Protein

Sequences producing significant alignments:                      (bits) Value


HC750102_1(HC750102|pid:none) Sequence 7193 from Patent WO201004...   288   4e-76
AY764155_1(AY764155|pid:none) Vitis vinifera heat shock protein ...   288   4e-76
GQ342709_1(GQ342709|pid:none) Vitis labrusca x Vitis vinifera he...   288   4e-76
CP001107_2482(CP001107|pid:none) Eubacterium rectale ATCC 33656,...   286   2e-75
AJ970534_1(AJ970534|pid:none) Triticum turgidum subsp. durum par...   286   2e-75
FP929043_719(FP929043|pid:none) Eubacterium rectale M104/1 draft...   286   2e-75
HC750078_1(HC750078|pid:none) Sequence 7169 from Patent WO201004...   286   3e-75
AJ970533_1(AJ970533|pid:none) Triticum turgidum subsp. durum par...   286   3e-75
HC750088_1(HC750088|pid:none) Sequence 7179 from Patent WO201004...   286   3e-75
(Q6F2Y7) RecName: Full=Chaperone protein ClpB1; AltName: Full=AT...   286   3e-75

Homology CHS196 vs Genome