Homology CHR483 vs DNA
Query= CHR483 (CHR483Q) /CSM/CH/CHR4-D/CHR483Q.Seq.d/
(1438 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum3.seq;
ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq;
ddbjhum9.seq; /db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri1.seq;
ddbjpri2.seq; /db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq;
ddbjrod10.seq; ddbjrod11.seq; ddbjrod12.seq; ddbjrod13.seq;
ddbjrod14.seq; ddbjrod15.seq; ddbjrod16.seq; ddbjrod17.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/a/new_ddbjrod.seq; ddbjmam1.seq; ddbjmam2.seq;
/db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; ddbjvrt5.seq; ddbjvrt6.seq; ddbjvrt7.seq;
ddbjvrt8.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; ddbjinv6.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln10.seq;
ddbjpln11.seq; ddbjpln12.seq; ddbjpln13.seq; ddbjpln14.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
ddbjbct8.seq; ddbjbct9.seq; /db/DDBJNEW.DATA/a/new_ddbjbct.seq;
ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq; ddbjvrl4.seq;
/db/DDBJNEW.DATA/a/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss100.seq; ddbjgss101.seq; ddbjgss102.seq; ddbjgss103.seq;
ddbjgss104.seq; ddbjgss105.seq; ddbjgss106.seq; ddbjgss107.seq;
ddbjgss108.seq; ddbjgss109.seq; ddbjgss11.seq; ddbjgss110.seq;
ddbjgss111.seq; ddbjgss112.seq; ddbjgss113.seq; ddbjgss114.seq;
ddbjgss115.seq; ddbjgss116.seq; ddbjgss117.seq; ddbjgss118.seq;
ddbjgss119.seq; ddbjgss12.seq; ddbjgss120.seq; ddbjgss13.seq;
ddbjgss14.seq; ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq;
ddbjgss18.seq; ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq;
ddbjgss21.seq; ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq;
ddbjgss25.seq; ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq;
ddbjgss29.seq; ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq;
ddbjgss32.seq; ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq;
ddbjgss36.seq; ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq;
ddbjgss4.seq; ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq;
ddbjgss43.seq; ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq;
ddbjgss47.seq; ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq;
ddbjgss50.seq; ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq;
ddbjgss54.seq; ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq;
ddbjgss58.seq; ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq;
ddbjgss61.seq; ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq;
ddbjgss65.seq; ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq;
ddbjgss69.seq; ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq;
ddbjgss72.seq; ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq;
ddbjgss76.seq; ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq;
ddbjgss8.seq; ddbjgss80.seq; ddbjgss81.seq; ddbjgss82.seq;
ddbjgss83.seq; ddbjgss84.seq; ddbjgss85.seq; ddbjgss86.seq;
ddbjgss87.seq; ddbjgss88.seq; ddbjgss89.seq; ddbjgss9.seq;
ddbjgss90.seq; ddbjgss91.seq; ddbjgss92.seq; ddbjgss93.seq;
ddbjgss94.seq; ddbjgss95.seq; ddbjgss96.seq; ddbjgss97.seq;
ddbjgss98.seq; ddbjgss99.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg53.seq; ddbjhtg54.seq;
ddbjhtg55.seq; ddbjhtg56.seq; ddbjhtg57.seq; ddbjhtg6.seq;
ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat11.seq; ddbjpat12.seq; ddbjpat13.seq; ddbjpat14.seq;
ddbjpat15.seq; ddbjpat16.seq; ddbjpat17.seq; ddbjpat18.seq;
ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq;
ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts10.seq;
ddbjsts11.seq; ddbjsts12.seq; ddbjsts2.seq; ddbjsts3.seq;
ddbjsts4.seq; ddbjsts5.seq; ddbjsts6.seq; ddbjsts7.seq; ddbjsts8.seq;
ddbjsts9.seq; /db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/a/new_est_cele1.seq; est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/a/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/a/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
/db/DDBJNEW.DATA/a/new_est_mous1.seq;
/db/DDBJNEW.DATA/a/new_est_mous2.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/a/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; est_rest4.seq; est_rest5.seq; est_rest6.seq;
est_rest7.seq; est_rest8.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq;
/db/DDBJNEW.DATA/a/new_est_rest2.seq;
/db/DDBJNEW.DATA/a/new_est_rest3.seq
51,417,035 sequences; 55,201,379,993 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AY232268|AY232268.1 Dictyostelium discoideum putative protei... 1138 0.0 2
AC151119|AC151119.4 Bos taurus clone CH240-85F23, WORKING DR... 38 0.28 2
CE443900|CE443900.1 tigr-gss-dog-17000336296881 Dog Library ... 48 0.52 1
AP008207|AP008207.1 Oryza sativa (japonica cultivar-group) g... 48 0.52 1
AP003793|AP003793.1 Oryza sativa (japonica cultivar-group) g... 48 0.52 1
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma... 34 0.63 7
BX908731|BX908731.10 Zebrafish DNA sequence from clone DKEY-... 40 0.85 7
AJ749949|AJ749949.1 Francisella tularensis subsp. tularensis... 36 0.89 2
AE007582|AE007582.1 Clostridium acetobutylicum ATCC 824 sect... 30 1.1 7
AC142143|AC142143.29 Medicago truncatula clone mth2-25c22, c... 38 1.4 7
CG681014|CG681014.1 96C10_30T3 Carica papaya BAC library Car... 36 1.6 3
AC159124|AC159124.11 Medicago truncatula clone mth2-172h20, ... 38 1.9 6
BU455809|BU455809.1 603217002F1 CSEQRBN14 Gallus gallus cDNA... 46 2.0 1
AZ135866|AZ135866.1 SP_0153_B2_F10_T7A Strongylocentrotus pu... 46 2.0 1
AC064852|AC064852.4 Homo sapiens BAC clone RP11-174L18 from ... 46 2.0 1
AC125815|AC125815.6 Homo sapiens 3 BAC RP11-168E23 (Roswell ... 46 2.0 1
BZ126038|BZ126038.1 CH230-452A17.TV CHORI-230 Segment 2 Ratt... 40 2.8 2
AL445565|AL445565.1 Mycoplasma pulmonis (strain UAB CTIP) co... 34 3.6 2
AQ156502|AQ156502.1 nbxb0008A21r CUGI Rice BAC Library Oryza... 34 4.4 3
AC105738|AC105738.2 Sus scrofa clone RP44-258D7, WORKING DRA... 38 5.4 8
AZ530321|AZ530321.1 ENTCD88TF Entamoeba histolytica Sheared ... 32 5.9 3
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 42 6.2 9
BH163965|BH163965.1 ENTTK75TR Entamoeba histolytica Sheared ... 32 6.7 3
DT036556|DT036556.1 VVL117D11_694738 CabSau Berry Postverais... 40 7.0 2
DT036794|DT036794.1 VVL120B07_695214 CabSau Berry Postverais... 40 7.1 2
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 34 7.5 10
AC117899|AC117899.6 Rattus norvegicus clone CH230-320D19, WO... 38 7.9 8
DR123099|DR123099.1 49328312 Drosophila pseudoobscura embryo... 44 8.1 1
CA060564|CA060564.1 ssalrgb513128 mixed_tissue Salmo salar c... 44 8.1 1
AC167451|AC167451.1 Bos taurus clone CH240-197J13, *** SEQUE... 44 8.1 1
AC090580|AC090580.2 Homo sapiens chromosome 8 clone RP11-745... 44 8.1 1
AC041019|AC041019.2 Homo sapiens clone RP11-572N16, WORKING ... 44 8.1 1
CR855276|CR855276.4 Zebrafish DNA sequence *** SEQUENCING IN... 44 8.1 1
CR759944|CR759944.4 Zebrafish DNA sequence *** SEQUENCING IN... 44 8.1 1
BX957228|BX957228.7 Zebrafish DNA sequence *** SEQUENCING IN... 44 8.1 1
BX276183|BX276183.2 Zebrafish DNA sequence *** SEQUENCING IN... 44 8.1 1
AC164278|AC164278.2 Bos taurus clone CH240-132L10, *** SEQUE... 44 8.1 1
AC153209|AC153209.2 Bos taurus clone CH240-29N11, WORKING DR... 44 8.1 1
AC021405|AC021405.3 Homo sapiens clone RP11-29E4, WORKING DR... 44 8.1 1
AC136336|AC136336.1 Homo sapiens chromosome 17 clone RP13-39... 44 8.1 1
AC134357|AC134357.3 Rattus norvegicus clone CH230-103G2, ***... 44 8.1 1
AC018873|AC018873.3 Homo sapiens chromosome 12 clone RP11-17... 44 8.1 1
AC112550|AC112550.4 Rattus norvegicus clone CH230-233P6, ***... 44 8.1 1
AC111605|AC111605.4 Rattus norvegicus clone CH230-181F1, ***... 44 8.1 1
DE101455|DE101455.1 Oryzias latipes DNA, clone: ola1-134K03.... 44 8.1 1
CR038245|CR038245.1 Forward strand read from insert in 3'HPR... 44 8.1 1
BZ613173|BZ613173.1 KBrH138O12e Brassica rapa BAC library (K... 44 8.1 1
AZ963824|AZ963824.1 2M0233E16F Mouse 10kb plasmid UUGC2M lib... 44 8.1 1
AL273166|AL273166.1 Tetraodon nigroviridis genome survey seq... 44 8.1 1
DU104147|DU104147.1 JBnY023G03R Brassica napus BAC library J... 44 8.1 1
CZ539711|CZ539711.1 SRAA-aad27c11.g1 Strongyloides ratti who... 44 8.1 1
CR932966|CR932966.2 Medicago truncatula chromosome 5 clone m... 44 8.1 1
BX248517|BX248517.10 Zebrafish DNA sequence from clone DKEY-... 44 8.1 1
BX248240|BX248240.14 Zebrafish DNA sequence from clone CH211... 44 8.1 1
AC129288|AC129288.3 Mus musculus BAC clone RP24-481M4 from c... 44 8.1 1
AL954306|AL954306.10 Zebrafish DNA sequence from clone CH211... 44 8.1 1
AC022439|AC022439.5 Homo sapiens chromosome 5 clone RP11-184... 44 8.1 1
AL732506|AL732506.10 Mouse DNA sequence from clone RP23-195K... 44 8.1 1
AL355608|AL355608.11 Human DNA sequence from clone RP11-567J... 44 8.1 1
AC012462|AC012462.5 Homo sapiens BAC clone RP11-566P21 from ... 44 8.1 1
AC117373|AC117373.10 Homo sapiens 12 BAC RP11-174M13 (Roswel... 44 8.1 1
AC011516|AC011516.3 Homo sapiens chromosome 19 clone LLNLF-1... 44 8.1 1
>AY232268|AY232268.1 Dictyostelium discoideum putative protein Roco6
(roco6) gene, complete cds.
Length = 6684
Score = 1138 bits (574), Expect(2) = 0.0
Identities = 577/578 (99%)
Strand = Plus / Plus
Query: 2 ctggtttatttagtagattattaattcgtttattaattagtaaagaatttgatatgaaac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3341 ctggtttatttagtagattattaattcgtttattaattagtaaagaatttgatatgaaac 3400
Query: 62 caattctttattggagaaatggtgtagttgttgaatcacaatctggtaaatcattccttt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3401 caattctttattggagaaatggtgtagttgttgaatcacaatctggtaaatcattccttt 3460
Query: 122 caacctctactgctttaattgaaatggtaccaagttatgcaaattgtagttcaactatta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3461 caacctctactgctttaattgaaatggtaccaagttatgcaaattgtagttcaactatta 3520
Query: 182 aaattagtgttagaggtgatcgtcgtactggtagaggtttatcagcaaaacttttaagat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3521 aaattagtgttagaggtgatcgtcgtactggtagaggtttatcagcaaaacttttaagat 3580
Query: 242 taatcgttgaaattgctgatacactttgtacaagttggtatcatttagaaacaaatcaag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3581 taatcgttgaaattgctgatacactttgtacaagttggtatcatttagaaacaaatcaag 3640
Query: 302 ttataccatgtccacattgtattcataaaccaaattgtacattattttcattgagtgatt 361
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3641 ttataccatgtccacattgtattaataaaccaaattgtacattattttcattgagtgatt 3700
Query: 362 gtgaagcagttgcaagtagtggtgtttggtatttactttgtggtgatagaaaaattaatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3701 gtgaagcagttgcaagtagtggtgtttggtatttactttgtggtgatagaaaaattaatt 3760
Query: 422 tcgaaacttttgtaccagatgttgcaatgtctgatttttggggtagtggtagtaagaaat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3761 tcgaaacttttgtaccagatgttgcaatgtctgatttttggggtagtggtagtaagaaat 3820
Query: 482 tcaattatgatcaaattaaaatgcataaagaaaaaagaattctatcaattaaacctgcat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3821 tcaattatgatcaaattaaaatgcataaagaaaaaagaattctatcaattaaacctgcat 3880
Query: 542 catttggtaataatcaaattcaatttgaagttagagtt 579
||||||||||||||||||||||||||||||||||||||
Sbjct: 3881 catttggtaataatcaaattcaatttgaagttagagtt 3918
Score = 850 bits (429), Expect(4) = 0.0
Identities = 429/429 (100%)
Strand = Plus / Plus
Query: 686 caatggaaatggaatttaagagtgaatctgaaaaatcatcttggctaactgcaatcaatc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5849 caatggaaatggaatttaagagtgaatctgaaaaatcatcttggctaactgcaatcaatc 5908
Query: 746 gtgttatcaatcaaaatataccactctatgaaattgcacttggtaaacaaatgacaagtg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5909 gtgttatcaatcaaaatataccactctatgaaattgcacttggtaaacaaatgacaagtg 5968
Query: 806 gtagtgaaaatgattatatcacaaatttactatcggttggtccaaatgtttgggtatcac 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5969 gtagtgaaaatgattatatcacaaatttactatcggttggtccaaatgtttgggtatcac 6028
Query: 866 ttaaagaaacaccatcaattttggtttataatgtaaagagtaaagaattggttacaaaaa 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6029 ttaaagaaacaccatcaattttggtttataatgtaaagagtaaagaattggttacaaaaa 6088
Query: 926 tctctttaaatgatgatcaatccagtgatcaatggggtaaaactggtgctgtaaatatga 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6089 tctctttaaatgatgatcaatccagtgatcaatggggtaaaactggtgctgtaaatatga 6148
Query: 986 tgttggttaataatttcgtttggataactggtggttcaaaattgactcaaattgattcac 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6149 tgttggttaataatttcgtttggataactggtggttcaaaattgactcaaattgattcac 6208
Query: 1046 aatcttatcaactcttggaagtacatggaaatcattattcaaaaccaatcacctcaatgg 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6209 aatcttatcaactcttggaagtacatggaaatcattattcaaaaccaatcacctcaatgg 6268
Query: 1106 cattggttg 1114
|||||||||
Sbjct: 6269 cattggttg 6277
Score = 531 bits (268), Expect(4) = 0.0
Identities = 268/268 (100%)
Strand = Plus / Plus
Query: 1122 tgtttggatctcttgtgaagatgaatcactttcagtttgggatggtgatactggttcctt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6285 tgtttggatctcttgtgaagatgaatcactttcagtttgggatggtgatactggttcctt 6344
Query: 1182 tattagaaaagttggttctccaattggttcaccaactaagccaaccgtttacactaaact 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6345 tattagaaaagttggttctccaattggttcaccaactaagccaaccgtttacactaaact 6404
Query: 1242 tttatatttcagtggttatgtttgggcttgtactcaaggttcaattcatatttattgtat 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6405 tttatatttcagtggttatgtttgggcttgtactcaaggttcaattcatatttattgtat 6464
Query: 1302 tcattcattaacttgtaaaaagaaagttgaatcaaaaaatcatccaaatagtattgtaga 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6465 tcattcattaacttgtaaaaagaaagttgaatcaaaaaatcatccaaatagtattgtaga 6524
Query: 1362 tttaattaaagttttccaacaaactgtt 1389
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Sbjct: 6525 tttaattaaagttttccaacaaactgtt 6552
Score = 143 bits (72), Expect(2) = 0.0
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 604 gtacaacaaattattaataatggtgctgatgataatataacaacaactacattggcagtt 663
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Sbjct: 3943 gtacaacaaattattaataatggtgctgatgataatataacaacaactacattggcagtt 4002
Query: 664 aataatattaaa 675
||||||||||||
Sbjct: 4003 aataatattaaa 4014
Score = 56.0 bits (28), Expect(4) = 0.0
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1388 ttggtcatgttgtggtacaaataatgtt 1415
||||||||||||||||||||||||||||
Sbjct: 6552 ttggtcatgttgtggtacaaataatgtt 6579
Score = 40.1 bits (20), Expect(4) = 0.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1419 ttggtcttaaacaataaatt 1438
||||||||||||||||||||
Sbjct: 6585 ttggtcttaaacaataaatt 6604
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 58,827,975
Number of Sequences: 51417035
Number of extensions: 58827975
Number of successful extensions: 4937317
Number of sequences better than 10.0: 125
length of query: 1438
length of database: 55,201,379,993
effective HSP length: 24
effective length of query: 1414
effective length of database: 53,967,371,153
effective search space: 76309862810342
effective search space used: 76309862810342
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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