Dictyostelium discoideum cDNA Clone CHO422

Sequence CHO422

ATATAATAAA TAATGTCAGA ACCAAAACCA ACTCAACCAA TCAAAGAGAT
TGATGAGGAA ACTAAAAGAA AGAATGAAGA GAAAAAGAAA GCCAAAGAGG
CAGAGAAAGC AGAGAAATTA GCAAAAATGA AAGAAAAGGA AGCTAAACAA
GCAGCAGCAA AAGAAAAAGA ATTACAAAAT AAACTTAAAA AAGAACAAGA
GAAAAAAGAA AAAGAAGCTG AAGAAAAAGA AAAACAAGAA GCTGAAGAAA
AAATTGTTAG AGAACATATT GAAAAAATTT TAAAAACCCC AAAGGGTGAA
AAGAAAGATG TTTCAAGTTT ATTATCATCA TATCATCCAA CAGCAGTTGA
ATCAATTTGG TATGATTATT GGTTAGATAA TGGATATTTT TCACCAGAGA
AACAAATGGA GATTCAACCA CATGTAGTTA AAGATAAAAA GTTTGTAATT
GTTATTCCAC CACCAAATGT TACAGGTAGT TTACATTTAG GACATGCATT
AACCAATTCA ATTCAAGATG CAGTTGTTCG TTATCATCGT ATGAAGGGTG
AAGTTTGTTT ATGGGTACCA GGTACAGATC ATGCAGGTAT TGCAACACAA
GTAGTTGTAG AGAAAAAGAT TTGGAAAGAG AATAAGATCA CTCGTCATGA
T--------- -CATCCATTC ATGCCATACC TCACCGAGGA GTTGTATCAA
TCATTACCAC GTCGTCCAGA AGATGTCATT CCAACCATTA TGTTATGTCC
ATACCCACAA TCTCAATCAT GTTGGGCCAA TTCTGACATT GAGGAAGAAA
TGAAACAATG TCAAGATATC ATCAAATCAA TTCGTTCACT TCGTGCTACC
TATACCATTC CAGCCTCTAA AAAACTTCAC ACTTATCTTC ACGTTAAAAA
TCAAGAGAAT CTCGAACGTT TCACTAAAAA CTCTTCATTC ATTCGTGTTT
TAGCTTATGC CTCTGAACTC GAAGTTTCCA TTAGTGATGA ATCTCGTCCT
GGTTGTATCG TTAATGTTGT CAATGAAAAT GTTTCAACCC TTTTAGATGT
TAGAGGATCT GTTGATTTCA ATCTTGAAAT TGCTCGTCTC GAAACAAAGA
AACAACAATT GGTCAAAAAC TATGAAACTT TAGTTTCAAA AACTACCATA
CCTTCTTATG ATAAAGTTCC ACAAAATATC AGAGATGATA ATACTCAAAA
AATTAAAGCT TTAGATGAAG AAATTAATAT TACAAACAAA ACCATGAAAG
TTTTACAAAA TTAAATATTT AAAATTATAA ATAATAATTA ATAATAATAA
TAAAAAGTTT AATTACTAAA TT

Translated Amino Acid Sequence CHO422

i**IMSEPKPTQPIKEIDEETKRKNEEKKKAKEAEKAEKLAKMKEKEAKQAAAKEKELQN
KLKKEQEKKEKEAEEKEKQEAEEKIVREHIEKILKTPKGEKKDVSSLLSSYHPTAVESIW
YDYWLDNGYFSPEKQMEIQPHVVKDKKFVIVIPPPNVTGSLHLGHALTNSIQDAVVRYHR
MKGEVCLWVPGTDHAGIATQVVVEKKIWKENKITRHD---

---HPFMPYLTEELYQSLPRRPEDVIPTIMLCPYPQSQSCWANSDIEEEMKQCQDIIKSI
RSLRATYTIPASKKLHTYLHVKNQENLERFTKNSSFIRVLAYASELEVSISDESRPGCIV
NVVNENVSTLLDVRGSVDFNLEIARLETKKQQLVKNYETLVSKTTIPSYDKVPQNIRDDN
TQKIKALDEEINITNKTMKVLQN*ifkiinnn*****kv*lln

Homology CHO422 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CHO422 (CHO422Q) /CSM/CH/CHO4-A/CHO422Q.Seq.d/                       1863   0.0
VHL788 (VHL788Q) /CSM/VH/VHL7-D/VHL788Q.Seq.d/                       1179   0.0
VHL460 (VHL460Q) /CSM/VH/VHL4-C/VHL460Q.Seq.d/                       1179   0.0
VHL308 (VHL308Q) /CSM/VH/VHL3-A/VHL308Q.Seq.d/                       1179   0.0
VHM840 (VHM840Q) /CSM/VH/VHM8-B/VHM840Q.Seq.d/                       1174   0.0
VHN702 (VHN702Q) /CSM/VH/VHN7-A/VHN702Q.Seq.d/                       1166   0.0
VHJ111 (VHJ111Q) /CSM/VH/VHJ1-A/VHJ111Q.Seq.d/                       1166   0.0
VHA717 (VHA717Q) /CSM/VH/VHA7-A/VHA717Q.Seq.d/                       1166   0.0
SHD476 (SHD476Q) /CSM/SH/SHD4-D/SHD476Q.Seq.d/                       1166   0.0
VHP692 (VHP692Q) /CSM/VH/VHP6-D/VHP692Q.Seq.d/                       1160   0.0

Homology CHO422 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 ma...  1158   0.0    7
AB092433|AB092433.1 Entamoeba histolytica mRNA for valyl tRN...    96   4e-28  2
BH161129|BH161129.1 ENTSE35TR Entamoeba histolytica Sheared ...    84   1e-24  2
BH159895|BH159895.1 ENTRU27TF Entamoeba histolytica Sheared ...    72   5e-21  2
AZ550882|AZ550882.1 ENTEC77TF Entamoeba histolytica Sheared ...    84   2e-16  3
AZ551677|AZ551677.1 ENTDS20TF Entamoeba histolytica Sheared ...    84   8e-12  1
CV464811|CV464811.1 taj26d03.y1 Hydra EST UCI 5 ALP Hydra ma...    52   4e-09  2
CZ531779|CZ531779.1 SRAA-aac74g10.b1 Strongyloides ratti who...    58   4e-09  2
DD122063|DD122063.1 STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLE...    58   1e-05  2
AX622476|AX622476.1 Sequence 5439 from Patent WO02094868.          58   1e-05  2

Homology CHO422 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q86KU2) RecName: Full=Probable valyl-tRNA synthetase, cytoplasm...   389   e-106
JN048908_1(JN048908|pid:none) Acytostelium subglobosum clone ADB...   220   2e-55
JN048921_1(JN048921|pid:none) Dictyostelium lacteum clone DL0231...   213   3e-53
FN357900_10(FN357900|pid:none) Schistosoma mansoni genome sequen...   157   1e-36
AB092433_1(AB092433|pid:none) Entamoeba histolytica mRNA for val...   157   1e-36
AE013599_1829(AE013599|pid:none) Drosophila melanogaster chromos...   157   2e-36
CR954203_287(CR954203|pid:none) Ostreococcus tauri strain OTTH05...   153   2e-35
AF087141_1(AF087141|pid:none) Mus musculus uncharacterized long ...   150   2e-34
(Q04462) RecName: Full=Valyl-tRNA synthetase;          EC=6.1.1....   150   2e-34
BC053703_1(BC053703|pid:none) Mus musculus valyl-tRNA synthetase...   150   2e-34

Homology CHO422 vs Genome