Dictyostelium discoideum cDNA Clone CHO169

Sequence CHO169

ACACACACTC AACACACTAT CACATACATT ATATATTTAT TAAAAATATA
GAAATAATAA TAAAATATTA CATGTATATG AAAAAAAGAA AAAATGCAAC
AACCAATTTC GATTCAACAA CCAGTAGTTA ATAATATAAA TAATAGTCCA
AATAATCAAG CAAATATAAA TAACAATACA ACTAATAATA CCAATAATAA
TAATAATAAT AATAATACTA CTAATAATAT TGCTAACAAC AATAATTCCA
ATAACATCAA TAATAATAAT GAAATTAATA ATAGTAATAT AAATAATAAT
ATAAATAATG GTATAAATAA TGATATAGAT AGAGGTGGTG AAAAGAAAGC
AAATAAATTA ATTGCAAAAA CAACAAAGAA ATTTAATAAA GATAAGACAG
CATATACAAG TGGTAAATTT TTTGAACTTT GGAGAAATCA AGTTGTACGT
GATAAAATAT TAGGTTATGT TAGAATTCAT AATTTACATT ATGATAAGAG
AGTTTTTAAA TGTATAGATT TAAATAATTG TATTGATAAC GGTGCAGATT
TACAACAACA ACATAATTGT CATAGAGTTC ATAATCATTA TCATCAAGAT
CTTGGTCAT- ---------A AATTAATTAT CACTGGTAAT AATTTACAAC
ATGATGGTCC TGACGTTTTC ATGGTTGGTA AAAAGGGCTC AAAAATCACT
CATTTAAAAC TTAGAGGTTA TGAAAAACCT ATTTGTCAAG AAATGTTTAA
GAATTTAGTT AACCTAAAAT CAATTCAATT CATTGGTGCC TACAATCATC
AATTAGGACC AAACTGTTTC CCACCACAAT CAATTACAAA TCTCGAATTT
GATTGTTTAC CATCGGTCAT CCCAATTGGT TCCTTACCAT CAACTTTAAA
ATCATTAAGA GTTAAATCAT TTTGTACTCC ATTCTTAAAA AATTCATTAC
CATCTTCACT CTTAATTTTA GAATGTGCTT TTGTTCGTTC TTTCATTGAC
TCTTGTGAAA TTGTTGATGA GATATTTGTT GAACAACAAG CTCAATACGC
TCAACAACAA TTATTACAAA ATGAACAAGC ATTACAAGCT CAAAAACAAT
TAGAAATACA ACAACAAGTT GCTCAACAAA GATTACAACA ATTAAAACAA
CAAAAACAAC AACAACAACA ACAACAAGAT AATGAACAAC AATTAGATCA
TTCAATTGAA AATAATGATG GTAGTATACA AGATGACCAT GAACATGAAC
TTGAGGAAGA ACAAGAAAAN AAGAAGAAGA AGAAGATACA AANNATCACC
AACATCCATT TTACAAGAAG CAATAATCAA ATCAACA

Translated Amino Acid Sequence CHO169

thtqhtityiiyllki*k***nitci*KKEKMQQPISIQQPVVNNINNSPNNQANINNNT
TNNTNNNNNNNNTTNNIANNNNSNNINNNNEINNSNINNNINNGINNDIDRGGEKKANKL
IAKTTKKFNKDKTAYTSGKFFELWRNQVVRDKILGYVRIHNLHYDKRVFKCIDLNNCIDN
GADLQQQHNCHRVHNHYHQDLGH---

---KLIITGNNLQHDGPDVFMVGKKGSKITHLKLRGYEKPICQEMFKNLVNLKSIQFIGA
YNHQLGPNCFPPQSITNLEFDCLPSVIPIGSLPSTLKSLRVKSFCTPFLKNSLPSSLLIL
ECAFVRSFIDSCEIVDEIFVEQQAQYAQQQLLQNEQALQAQKQLEIQQQVAQQRLQQLKQ
QKQQQQQQQDNEQQLDHSIENNDGSIQDDHEHELEEEQEXKKKKKIQXITNIHFTRSNNQ
IN

Homology CHO169 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CHO169 (CHO169Q) /CSM/CH/CHO1-C/CHO169Q.Seq.d/                       1380   0.0
VHD627 (VHD627Q) /CSM/VH/VHD6-B/VHD627Q.Seq.d/                        852   0.0
AHA596 (AHA596Q) /CSM/AH/AHA5-D/AHA596Q.Seq.d/                        829   0.0
AHQ254 (AHQ254Q) /CSM/AH/AHQ2-C/AHQ254Q.Seq.d/                        716   0.0
SHF646 (SHF646Q) /CSM/SH/SHF6-B/SHF646Q.Seq.d/                        551   e-156
CHH261 (CHH261Q) /CSM/CH/CHH2-C/CHH261Q.Seq.d/                        551   e-156
CHG574 (CHG574Q) /CSM/CH/CHG5-D/CHG574Q.Seq.d/                         46   0.001
SFD521 (SFD521Q) /CSM/SF/SFD5-A/SFD521Q.Seq.d/                         42   0.022
CFH647 (CFH647Q) /CSM/CF/CFH6-B/CFH647Q.Seq.d/                         42   0.022
VSH134 (VSH134Q) /CSM/VS/VSH1-B/VSH134Q.Seq.d/                         40   0.085

Homology CHO169 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma...   852   0.0    15
BX842643|BX842643.1 Mycoplasma mycoides subsp. mycoides SC g...    36   3e-09  20
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    40   2e-08  15
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           44   2e-08  20
AE014826|AE014826.1 Plasmodium falciparum 3D7 chromosome 14 ...    38   1e-07  16
AE014838|AE014838.1 Plasmodium falciparum 3D7 chromosome 11 ...    40   4e-07  16
AL929356|AL929356.1 Plasmodium falciparum strain 3D7, chromo...    34   5e-07  19
AC117072|AC117072.3 Dictyostelium discoideum chromosome 2 ma...    36   7e-07  17
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma...    34   8e-07  16
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma...    32   9e-07  16

Homology CHO169 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q86AH2) RecName: Full=FNIP repeat-containing protein DDB_G02719...   291   8e-77
AC117075_45(AC117075|pid:none) Dictyostelium discoideum chromoso...    41   0.18
AC114265_1(AC114265|pid:none) Dictyostelium discoideum chromosom...    39   0.52
JN258408_1042(JN258408|pid:none) Megavirus chiliensis, complete ...    39   0.68
(Q54JC0) RecName: Full=Calmodulin-binding protein CmbB; AltName:...    37   3.4
AC117267_6(AC117267|pid:none) Dictyostelium discoideum chromosom...    37   3.4
JN258408_100(JN258408|pid:none) Megavirus chiliensis, complete g...    36   4.4
AC116305_136(AC116305|pid:none) Dictyostelium discoideum chromos...    36   4.4
(Q869L4) RecName: Full=Probable serine/threonine-protein kinase ...    36   4.4
(Q552Z2) RecName: Full=Probable serine/threonine-protein kinase ...    36   4.4

Homology CHO169 vs Genome