Dictyostelium discoideum cDNA Clone CHN326

Sequence CHN326

GTATACGGCC ATACTAGGTT GGAAACACAT CATCCCGTTC GATCTGATAA
GTAAATCGAC CTCAGGCCTT CCAAGTACTC TGGTTGGAGA CAACAGGGGA
ACATAGGGTG CTGTATACTA TTTTATTTCA TTTTCGAAAA CTTTAAAACA
CACTTTCATA TAATTTTTTT TCTTTTATAT TAAAATTTGT TTAAATATAA
AATGTTAAGA TCATTAAAAG CTTTAAAACT TAACAGTTTA AATGCCCAAA
AAGGTATTCG TCAATTCTGT TCAGATTCTA AAATCTCTGG TCAAGTTATT
GGTATTGATT TAGGTACAAC CAATTCTTGT GTTGCTGTTA TGCAAGGTGC
TGAAGCCCGT GTTTTAGAAA ATGCTGAAGG TGGTCGTACC ACTCCATCAG
TTGTTGCCTT CACTGAAGAC AACCAAAAAA TCGTTGGTTT ACCAGCTAAA
AGACAAATGG TTACAAATGC TGAAAATACA TTATTTGCTA CTAAACGTTT
AATTGGTCGT AGATTTGATG ATCCAATGAC TAAAAAAGAT ATGACAATGG
TACCATATAA GATTGTTAAA GGTCCAAATG GTGATGCATG GTTT------
----ACAAGT TAGAATTCAA ACCAGTGGTG GTTTAAGCAA AGATGATATC
GCTGGTATCC TTAAAGAATC TGAAGCCAAC GCTGAAGTTG ATCGTAAACG
TAAAGAATTA GTTGAAGCCA GAAACAATGG TGAATCCGTT GTATACCAAG
TTGAAAAAGA TTTAGTTGAA TTCAAAGATT ACCTCTCTCA ACCACAAACT
GAAGAAATTA AAAAAGCAGT CCAAGCCGTT CGTGATGTCC TTGCCAAAGA
AGATGGTTCA GCCATTGAAG CTGAAATTAA AAAATTACAC GATTTAACTC
GTTCATCTTT TGAAACTGCC TACAAAGCTA AACTCGATTC ATCTGCAAGC
AAATCTTCAT CAACTGAAAA TAAAGAAAAC AAAGATAACA CCACTGAAGC
TGAATTCAC

Translated Amino Acid Sequence CHN326

vyghtrlethhpvrsdk*idlrpskysgwrqqgnigccilfyfifenfkthfhiifflly
*NLFKYKMLRSLKALKLNSLNAQKGIRQFCSDSKISGQVIGIDLGTTNSCVAVMQGAEAR
VLENAEGGRTTPSVVAFTEDNQKIVGLPAKRQMVTNAENTLFATKRLIGRRFDDPMTKKD
MTMVPYKIVKGPNGDAWF---

---QVRIQTSGGLSKDDIAGILKESEANAEVDRKRKELVEARNNGESVVYQVEKDLVEFK
DYLSQPQTEEIKKAVQAVRDVLAKEDGSAIEAEIKKLHDLTRSSFETAYKAKLDSSASKS
SSTENKENKDNTTEAEF

Homology CHN326 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHF461 (VHF461Q) /CSM/VH/VHF4-C/VHF461Q.Seq.d/                        894   0.0
VHE351 (VHE351Q) /CSM/VH/VHE3-C/VHE351Q.Seq.d/                        894   0.0
VHA447 (VHA447Q) /CSM/VH/VHA4-B/VHA447Q.Seq.d/                        894   0.0
VFM478 (VFM478Q) /CSM/VF/VFM4-D/VFM478Q.Seq.d/                        894   0.0
VHB842 (VHB842Q) /CSM/VH/VHB8-B/VHB842Q.Seq.d/                        890   0.0
VHM141 (VHM141Q) /CSM/VH/VHM1-B/VHM141Q.Seq.d/                        884   0.0
SFB440 (SFB440Q) /CSM/SF/SFB4-B/SFB440Q.Seq.d/                        884   0.0
VHQ173 (VHQ173Q) /CSM/VH/VHQ1-D/VHQ173Q.Seq.d/                        878   0.0
VHB739 (VHB739Q) /CSM/VH/VHB7-B/VHB739Q.Seq.d/                        878   0.0
VHQ334 (VHQ334Q) /CSM/VH/VHQ3-B/VHQ334Q.Seq.d/                        874   0.0

Homology CHN326 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY170440|AY170440.1 Dictyostelium discoideum mitochondrial h...   795   0.0    4
AF539617|AF539617.1 Dictyostelium discoideum mitochondrial H...   795   0.0    2
V00191|V00191.1 5S ribosomal RNA of slime mold (D. discoideum).   236   7e-58  1
M25202|M25202.1 D.discoideum 5S rRNA.                             236   7e-58  1
AY171066|AY171066.1 Dictyostelium discoideum extrachromosoma...   236   7e-58  1
X67782|X67782.1 D.discoideum 5S ribosomal RNA gene.               236   7e-58  1
AY293825|AY293825.1 Dictyostelium discoideum transposon clus...   192   9e-45  1
AF419853|AF419853.1 Neocallimastix patriciarum heat shock pr...    76   3e-25  3
AW586153|AW586153.1 EST317776 MHAM Medicago truncatula/Glomu...    66   9e-23  4
BI267815|BI267815.1 NF111G06IN1F1052 Insect herbivory Medica...    66   1e-22  4

Homology CHN326 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q8I0H7) RecName: Full=Heat shock 70 kDa protein, mitochondrial;...   262   2e-68
CP002799_27(CP002799|pid:none) Sphingobium chlorophenolicum L-1 ...   167   1e-39
CP000356_2041(CP000356|pid:none) Sphingopyxis alaskensis RB2256,...   165   4e-39
EU306563_1(EU306563|pid:none) Tigriopus japonicus heat shock pro...   163   2e-38
AB306281_1(AB306281|pid:none) Alligator mississippiensis HSP70C ...   163   2e-38
HQ174779_1(HQ174779|pid:none) Holothuria glaberrima mortalin mRN...   162   2e-38
DQ524993_1(DQ524993|pid:none) Sparus aurata glucose regulated pr...   162   2e-38
HB845491_1(HB845491|pid:none) Sequence 194705 from Patent EP2090...   162   4e-38
FR856862_2373(FR856862|pid:none) Novosphingobium sp. PP1Y main c...   162   4e-38
BT033490_1(BT033490|pid:none) Zea mays full-length cDNA clone ZM...   162   4e-38

Homology CHN326 vs Genome