Dictyostelium discoideum cDNA Clone CHI549

Sequence CHI549

AAAACAAAAA ATTTAAATAA ATAAAATAAA AAAATTAAAA ATAAAAAAAT
GATAAATATT GAAGATATTT CAAAATCTTC AAATCAAAGT GAAGAAAAAC
AATTAAAAAG TACAAGTTCA AAAACAAAAT ACCCATTCGC AGCAAAAAGT
TTATTCAAAG GTTCAAATAA TATTACACCA TATTATTTAT CAACCAGTAA
TACATTCCAA TGTGTAGCAT CTGAGTCAAT TCAAACATGG CTTCTTTCAG
ATGATGGTCA TATCTTTACA TCCAGTGGTA ATTTTGTTTT AGATGTTTCA
TCAGGTGGTT ATTTTGTTGA ATTAGTACAA CTTAATTCAA ATTCAAAAAC
TCAAATTTGG ACAATTGATA CAACAAATAA TAAAATTCAA AACCAAGGTA
ATGGTAAATA CCTTGATATC GACAATTTGA ATATTTGTGT TGCACCTTTA
AATGGAAACG CAACTCAAAA ATGGACAACT TTTAGAAGAG CACCAATTCC
AACTGGTAAT TGGGGTTACT TTCAAAGCAA AAAATTGGAT TCCAATAATA
ATTATTGGGG TCTAAGTGTA TTAAATAATA GTACATCATA TAATACTAGT
GTAGTAATGA ATAAAGTTCA AGCAAAATCA ATAGGTCAAA TTTGGCAAAT
GACAAACGAT GGTCACATTT TATCACGTTT GGATGGTAAT TTAGTATT--
--------AT TGTTTGATGA TGAATCTCAT ATGGTTAGAA TTGATATGAG
TGAATATATG GAACAACATT CGGTTTCTCG TTTAATTGGT GCTCCACCAG
GTTATGTAGG TTATGATCAA GGTGGTCAAT TAACTGAAGC CGTCAGAAGA
AGACCATACA GTGTAGTATT GTTTGATGAA GTTGAAAAAG CTCATCAACA
AGTTTGGAAT GTTCTCTTAC AAGTATTGGA TGAAGGTCGT CTTACCGATG
GTCAAGGTAG AACCGTAGAT TTCTCAAATG TTGTTATCAT TATGACCTCA
AATTTAGGTA GTCAATACAT CCTTGGTGAA CAAGCAAACA AAGAAGGTGG
TAACAACTCT TTATCACAAG CTTGTAAAGA TAAAGTCATT GATGAAGTTA
GAAAACATTT CCGTCCAGAG TTTTTAAATC GTCTCGATGA TATAATTGTC
TTTACTCCAT TGAGTAAAGA AAACCTTCAT AGTATTATTA CTCTTCAATT
AAGATCCGTC GAAAAGAGAT TAGAAGATCA AAATATGTCT TTAAAGATTT
CAAACGATGC TTTAGATTCA ATTATCAATG CTGCATATGA TCCAATCTTT
GGTGGTAGAC CATTGAAACG TTACATTGAA AAGAATATTG TCACTGAACT
TAGTAAACTC ATCCTTGGTG GTAAATTAAA AGAAAATCAA GGTGTTGTTG
TCAATGAAAA AGATCATCAT CTCAACTTTG ATATTATAGA TTTAAAACAA
CAACAACAAC GTCCAGCTTC TCCAACCAAA AAACAAAAAA CTA

Translated Amino Acid Sequence CHI549

ktknlnk*NKKIKNKKMINIEDISKSSNQSEEKQLKSTSSKTKYPFAAKSLFKGSNNITP
YYLSTSNTFQCVASESIQTWLLSDDGHIFTSSGNFVLDVSSGGYFVELVQLNSNSKTQIW
TIDTTNNKIQNQGNGKYLDIDNLNICVAPLNGNATQKWTTFRRAPIPTGNWGYFQSKKLD
SNNNYWGLSVLNNSTSYNTSVVMNKVQAKSIGQIWQMTNDGHILSRLDGNLV---

---LFDDESHMVRIDMSEYMEQHSVSRLIGAPPGYVGYDQGGQLTEAVRRRPYSVVLFDE
VEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVIIMTSNLGSQYILGEQANKEGGNNS
LSQACKDKVIDEVRKHFRPEFLNRLDDIIVFTPLSKENLHSIITLQLRSVEKRLEDQNMS
LKISNDALDSIINAAYDPIFGGRPLKRYIEKNIVTELSKLILGGKLKENQGVVVNEKDHH
LNFDIIDLKQQQQRPASPTKKQKT

Homology CHI549 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CHI549 (CHI549Q) /CSM/CH/CHI5-C/CHI549Q.Seq.d/                       2613   0.0
SHL672 (SHL672Q) /CSM/SH/SHL6-C/SHL672Q.Seq.d/                       1524   0.0
SHJ825 (SHJ825Q) /CSM/SH/SHJ8-B/SHJ825Q.Seq.d/                       1524   0.0
SHA335 (SHA335Q) /CSM/SH/SHA3-B/SHA335Q.Seq.d/                       1524   0.0
CHR423 (CHR423Q) /CSM/CH/CHR4-A/CHR423Q.Seq.d/                       1524   0.0
CHM352 (CHM352Q) /CSM/CH/CHM3-C/CHM352Q.Seq.d/                       1520   0.0
CHS196 (CHS196Q) /CSM/CH/CHS1-D/CHS196Q.Seq.d/                       1518   0.0
SHG305 (SHG305Q) /CSM/SH/SHG3-A/SHG305Q.Seq.d/                       1516   0.0
CHH470 (CHH470Q) /CSM/CH/CHH4-C/CHH470Q.Seq.d/                       1516   0.0
SHK449 (SHK449Q) /CSM/SH/SHK4-C/SHK449Q.Seq.d/                       1515   0.0

Homology CHI549 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY282569|AY282569.1 Dictyostelium discoideum calcium up-regu...  1128   0.0    1
AY282572|AY282572.1 Dictyostelium discoideum calcium up-regu...  1096   0.0    1
AY282574|AY282574.1 Dictyostelium discoideum calcium up-regu...  1080   0.0    2
AY282568|AY282568.1 Dictyostelium discoideum calcium up-regu...  1041   0.0    2
AY282570|AY282570.1 Dictyostelium discoideum calcium up-regu...   585   0.0    2
AY282573|AY282573.1 Dictyostelium discoideum calcium up-regu...   753   0.0    3
AY282571|AY282571.1 Dictyostelium discoideum calcium up-regu...   942   0.0    4
AE016746|AE016746.1 Staphylococcus epidermidis ATCC 12228, s...   129   4e-34  3
AX145048|AX145048.1 Sequence 3770 from Patent WO0134809.          129   4e-34  3
AR485684|AR485684.1 Sequence 3770 from patent US 6703492.         129   4e-34  3

Homology CHI549 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q7Z202) RecName: Full=Calcium up-regulated protein C;  &AY28256...   434   e-120
(Q55FW5) RecName: Full=Calcium up-regulated protein A;                424   e-117
(Q7Z1I0) RecName: Full=Calcium up-regulated protein F;                423   e-116
AY282572_1(AY282572|pid:none) Dictyostelium discoideum calcium u...   423   e-116
AY282574_1(AY282574|pid:none) Dictyostelium discoideum calcium u...   419   e-115
(Q7Z1Z9) RecName: Full=Calcium up-regulated protein G;  &AY28257...   405   e-111
HC750102_1(HC750102|pid:none) Sequence 7193 from Patent WO201004...   290   1e-76
AY764155_1(AY764155|pid:none) Vitis vinifera heat shock protein ...   290   1e-76
GQ342709_1(GQ342709|pid:none) Vitis labrusca x Vitis vinifera he...   290   1e-76
CP001107_2482(CP001107|pid:none) Eubacterium rectale ATCC 33656,...   289   3e-76

Homology CHI549 vs Genome