Homology CHC609 vs DNA
Query= CHC609 (CHC609Q) /CSM/CH/CHC6-A/CHC609Q.Seq.d/
(1235 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum23.seq;
ddbjhum24.seq; ddbjhum3.seq; ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq;
ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; ddbjvrt5.seq;
/db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; ddbjinv6.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln10.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
ddbjbct8.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss76.seq;
ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq; ddbjgss8.seq;
ddbjgss80.seq; ddbjgss81.seq; ddbjgss82.seq; ddbjgss83.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat11.seq; ddbjpat12.seq; ddbjpat13.seq; ddbjpat14.seq;
ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq;
ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; ddbjsts4.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq;
ddbjsyn.seq; /db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/b/new_est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/b/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
est_osat1.seq; /db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; est_rest4.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
38,603,920 sequences; Z,714,659,095 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 36 2e-06 24
AP006628|AP006628.1 Onion yellows phytoplasma OY-M DNA, comp... 36 2e-04 25
AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 ma... 34 3e-04 15
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma... 38 4e-04 10
AP004170|AP004170.1 Mycoplasma penetrans HF-2 DNA, complete ... 34 5e-04 16
AE017263|AE017263.1 Mesoplasma florum L1 complete genome. 32 5e-04 25
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 ma... 40 8e-04 15
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma... 32 0.001 16
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 34 0.002 19
AP004172|AP004172.1 Mycoplasma penetrans HF-2 DNA, complete ... 34 0.005 14
CP000013|CP000013.1 Borrelia garinii PBi, complete genome. 44 0.007 20
BX842642|BX842642.1 Mycoplasma mycoides subsp. mycoides SC g... 30 0.007 20
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma... 34 0.008 17
CR382399|CR382399.1 Plasmodium falciparum chromosome 6, comp... 32 0.008 18
CD107524|CD107524.1 AGENCOURT_14020248 NIH_MGC_179 Homo sapi... 44 0.009 2
AP004171|AP004171.1 Mycoplasma penetrans HF-2 DNA, complete ... 34 0.009 16
AC117072|AC117072.3 Dictyostelium discoideum chromosome 2 ma... 36 0.014 10
AC116920|AC116920.3 Dictyostelium discoideum chromosome 2 ma... 38 0.017 10
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 32 0.019 17
BX842643|BX842643.1 Mycoplasma mycoides subsp. mycoides SC g... 32 0.033 19
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma... 32 0.038 11
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 ma... 34 0.042 16
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma... 32 0.043 14
AX344558|AX344558.1 Sequence 9 from Patent WO0200932. 32 0.046 16
AL031745|AL031745.8 Plasmodium falciparum DNA from MAL1P2. 34 0.059 14
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 34 0.070 14
AE014822|AE014822.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 0.071 14
AL445565|AL445565.1 Mycoplasma pulmonis (strain UAB CTIP) co... 42 0.077 16
CR427877|CR427877.1 Xenopus tropicalis EST, clone TTbA020e16... 50 0.087 1
CR430561|CR430561.1 Xenopus tropicalis EST, clone TTbA019e16... 50 0.087 1
AC093730|AC093730.3 Homo sapiens BAC clone RP11-12K22 from 4... 32 0.090 10
AE014848|AE014848.1 Plasmodium falciparum 3D7 chromosome 12,... 36 0.092 12
AC116330|AC116330.2 Dictyostelium discoideum chromosome 2 ma... 30 0.097 12
AJ010592|AJ010592.2 Guillardia theta DNA for complete sequen... 32 0.10 13
BD061520|BD061520.1 Genome DNA of symbiotic bacteria of aphid. 32 0.13 21
AR409405|AR409405.1 Sequence 1 from patent US 6632935. 32 0.13 21
AC036227|AC036227.2 Homo sapiens chromosome 11 clone RP11-59... 38 0.13 9
AE017338|AE017338.1 Mycoplasma mobile 163K section 2 of 3 of... 42 0.18 16
AX344564|AX344564.1 Sequence 15 from Patent WO0200932. 32 0.19 13
AY077835|AY077835.1 Goatpox virus strain Pellor, complete ge... 34 0.19 9
AY077836|AY077836.1 Goatpox virus strain G20-LKV, complete g... 34 0.19 9
AP001119|AP001119.1 Buchnera aphidicola str. APS (Acyrthosip... 32 0.20 15
AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 ma... 34 0.21 10
AC004153|AC004153.7 Plasmodium falciparum chromosome 12 clon... 36 0.23 10
BX322647|BX322647.12 Zebrafish DNA sequence from clone DKEYP... 38 0.24 10
AC019247|AC019247.4 Homo sapiens chromosome 3 clone RP11-271... 44 0.31 6
AC121309|AC121309.8 Mus musculus chromosome 3 clone RP24-303... 48 0.34 1
AX695914|AX695914.1 Sequence 1541 from Patent WO03008583. 48 0.34 1
AZ942628|AZ942628.1 2M0202A24R Mouse 10kb plasmid UUGC2M lib... 48 0.34 1
AP002532|AP002532.1 Homo sapiens genomic DNA, chromosome 1q2... 36 0.37 12
AC098813|AC098813.1 Papio anubis clone RP41-479E1, WORKING D... 32 0.40 8
AC091184|AC091184.6 Homo sapiens chromosome 8, clone RP11-35... 32 0.41 9
AE017206|AE017206.1 Lactobacillus johnsonii NCC 533, section... 46 0.42 8
AC027785|AC027785.2 Homo sapiens clone RP11-175K20, WORKING ... 38 0.45 10
AL357124|AL357124.19 Human DNA sequence from clone RP11-472A... 36 0.45 8
AC146445|AC146445.2 Pan troglodytes chromosome 7 clone RP43-... 38 0.48 5
BX927199|BX927199.4 Zebrafish DNA sequence from clone CH211-... 36 0.54 6
AB063521|AB063521.2 Wigglesworthia glossinidia endosymbiont ... 30 0.56 17
CO816651|CO816651.1 Nvit_emb2_005 Nasonia PDNR Embryonic Lib... 32 0.61 4
BX842645|BX842645.1 Mycoplasma mycoides subsp. mycoides SC g... 36 0.62 12
AJ235270|AJ235270.1 Rickettsia prowazekii strain Madrid E, c... 36 0.63 12
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 34 0.63 15
AC115680|AC115680.3 Dictyostelium discoideum chromosome 2 ma... 34 0.65 9
AC060228|AC060228.10 Homo sapiens chromosome 4 clone RP11-92... 36 0.65 8
CN524679|CN524679.1 GQ015M17.T3_D01 GQ015 Populus balsamifer... 34 0.65 3
AE014830|AE014830.1 Plasmodium falciparum 3D7 chromosome 10 ... 36 0.66 12
AC102840|AC102840.2 Mus musculus clone RP24-370M23, WORKING ... 34 0.74 11
AC122162|AC122162.32 Medicago truncatula clone mth2-16g15, c... 36 0.77 8
BX572090|BX572090.1 Prochlorococcus marinus MED4 complete ge... 30 0.80 16
AC100802|AC100802.2 Homo sapiens chromosome 8, clone CTB-210... 34 0.83 8
AP004173|AP004173.1 Mycoplasma penetrans HF-2 DNA, complete ... 34 0.88 11
AC021187|AC021187.5 Homo sapiens chromosome X clone RP11-750... 36 0.88 9
AC116383|AC116383.11 Mus musculus chromosome 5, clone RP23-1... 36 0.88 11
AX926717|AX926717.1 Sequence 7 from Patent WO03084989. 46 0.89 7
AY127037|AY127037.1 Epidaus xuliangae 16S ribosomal RNA gene... 40 0.90 2
AC015834|AC015834.5 Homo sapiens clone RP11-23H13, WORKING D... 32 0.92 13
AC113610|AC113610.4 Homo sapiens BAC clone RP11-373H2 from 2... 32 0.95 9
AC115607|AC115607.2 Dictyostelium discoideum chromosome 2 ma... 30 1.0 10
AC144533|AC144533.2 Homo sapiens clone RP13-546C24, WORKING ... 32 1.0 10
CR450798|CR450798.3 Zebrafish DNA sequence *** SEQUENCING IN... 44 1.1 10
AP006693|AP006693.1 Lotus corniculatus var. japonicus genomi... 36 1.1 8
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 ma... 30 1.2 11
AC067832|AC067832.3 Homo sapiens chromosome 8 clone RP11-93J... 36 1.2 11
AC137860|AC137860.4 Mus musculus clone RP23-12P20, WORKING D... 38 1.3 13
AY077834|AY077834.1 Sheeppox virus strain NISKHI, complete g... 32 1.3 10
AC103238|AC103238.5 Rattus norvegicus clone CH230-9M5, *** S... 46 1.4 1
AC094222|AC094222.8 Rattus norvegicus clone CH230-2P16, WORK... 46 1.4 1
CL408557|CL408557.1 RPCI44_415D7.r RPCI-44 Sus scrofa genomi... 46 1.4 1
AV402906|AV402906.1 Bombyx mori cDNA clone:heS30702. 46 1.4 1
BP125951|BP125951.1 Bombyx mori cDNA, clone:heS30702. 46 1.4 1
AC125517|AC125517.4 Mus musculus BAC clone RP24-261P6 from c... 46 1.4 1
CQ759881|CQ759881.1 Sequence 4 from Patent EP1382970. 46 1.4 1
AC096615|AC096615.7 Rattus norvegicus clone CH230-84O16, WOR... 46 1.4 1
AC148258|AC148258.3 Callithrix jacchus clone CH259-184D19, W... 46 1.4 1
AC131868|AC131868.6 Rattus norvegicus clone CH230-106F22, WO... 46 1.4 1
CR094040|CR094040.1 Forward strand read from insert in 5'HPR... 46 1.4 1
CQ759880|CQ759880.1 Sequence 3 from Patent EP1382970. 46 1.4 1
BZ476984|BZ476984.1 BONDE46TR BO_1.6_2_KB_tot Brassica olera... 46 1.4 1
BH471617|BH471617.1 BOHFL44TF BOHF Brassica oleracea genomic... 46 1.4 1
AC148559|AC148559.2 Oryctolagus cuniculus clone LB1-220P19, ... 32 1.4 11
>AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map
2567470-3108875 strain AX4, complete sequence.
Length = 541399
Score = 36.2 bits (18), Expect(19) = 0.004
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 208 gatgatgatgatttatta 225
||||||||||||||||||
Sbjct: 35628 gatgatgatgatttatta 35645
Score = 34.2 bits (17), Expect(24) = 2e-06
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 350 aattaccattattaaat 366
|||||||||||||||||
Sbjct: 277942 aattaccattattaaat 277926
Score = 34.2 bits (17), Expect(19) = 0.004
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 367 ttatttcaaaagttttt 383
|||||||||||||||||
Sbjct: 433720 ttatttcaaaagttttt 433704
Score = 32.2 bits (16), Expect(24) = 2e-06
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 122 atggtgctgacatttt 137
||||||||||||||||
Sbjct: 48098 atggtgctgacatttt 48113
Score = 32.2 bits (16), Expect(24) = 2e-06
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 257 acaatactaattcaaccaat 276
||||||| ||||||||||||
Sbjct: 100235 acaatacaaattcaaccaat 100254
Score = 30.2 bits (15), Expect(24) = 2e-06
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 980 ttattttaattttagttca 998
|||||||||||||| ||||
Sbjct: 214883 ttattttaattttatttca 214865
Score = 30.2 bits (15), Expect(19) = 0.004
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 1034 ctttcttaattcaat 1048
|||||||||||||||
Sbjct: 310326 ctttcttaattcaat 310340
Score = 28.2 bits (14), Expect(19) = 0.004
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 375 aaagtttttaaata 388
||||||||||||||
Sbjct: 81184 aaagtttttaaata 81197
Score = 28.2 bits (14), Expect(24) = 2e-06
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 101 acatttcatcacca 114
||||||||||||||
Sbjct: 473027 acatttcatcacca 473014
Score = 28.2 bits (14), Expect(19) = 0.004
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 1152 tttaaatagtgaat 1165
||||||||||||||
Sbjct: 334271 tttaaatagtgaat 334258
Score = 28.2 bits (14), Expect(19) = 0.004
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 402 agttttacaacaaa 415
||||||||||||||
Sbjct: 199898 agttttacaacaaa 199911
Score = 28.2 bits (14), Expect(19) = 0.004
Identities = 20/22 (90%)
Strand = Plus / Plus
Query: 336 tcaacaatcatcagaattacca 357
||||||||||| ||||| ||||
Sbjct: 67104 tcaacaatcattagaatcacca 67125
Score = 28.2 bits (14), Expect(24) = 2e-06
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 242 aattaaatgaaaac 255
||||||||||||||
Sbjct: 372428 aattaaatgaaaac 372415
Score = 28.2 bits (14), Expect(24) = 2e-06
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 104 tttcatcaccatta 117
||||||||||||||
Sbjct: 19721 tttcatcaccatta 19734
Score = 28.2 bits (14), Expect(24) = 2e-06
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 689 tttgtccaccaatt 702
||||||||||||||
Sbjct: 138106 tttgtccaccaatt 138119
Score = 28.2 bits (14), Expect(19) = 0.004
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 526 ttaattaaattaaa 539
||||||||||||||
Sbjct: 399847 ttaattaaattaaa 399834
Score = 28.2 bits (14), Expect(19) = 0.004
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 101 acatttcatcacca 114
||||||||||||||
Sbjct: 477951 acatttcatcacca 477938
Score = 28.2 bits (14), Expect(19) = 0.004
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 359 tattaaatttattt 372
||||||||||||||
Sbjct: 441099 tattaaatttattt 441086
Score = 28.2 bits (14), Expect(24) = 2e-06
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 217 gatttattattaaa 230
||||||||||||||
Sbjct: 98166 gatttattattaaa 98179
Score = 28.2 bits (14), Expect(24) = 2e-06
Identities = 17/18 (94%)
Strand = Plus / Minus
Query: 218 atttattattaaatggta 235
||||| ||||||||||||
Sbjct: 402162 atttaatattaaatggta 402145
Score = 28.2 bits (14), Expect(24) = 2e-06
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 443 aaagattaaagaaa 456
||||||||||||||
Sbjct: 222611 aaagattaaagaaa 222598
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 526 ttaattaaattaa 538
|||||||||||||
Sbjct: 221056 ttaattaaattaa 221044
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 363 aaatttatttcaa 375
|||||||||||||
Sbjct: 71265 aaatttatttcaa 71277
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 369 atttcaaaagttt 381
|||||||||||||
Sbjct: 119047 atttcaaaagttt 119059
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1041 aattcaatcattt 1053
|||||||||||||
Sbjct: 213183 aattcaatcattt 213171
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 134 ttttatcaaaaccaaat 150
|||| ||||||||||||
Sbjct: 21225 ttttttcaaaaccaaat 21241
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 83 caggtacatcaaa 95
|||||||||||||
Sbjct: 535136 caggtacatcaaa 535124
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1222 ttaaaatttttag 1234
|||||||||||||
Sbjct: 202685 ttaaaatttttag 202673
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 351 attaccattatta 363
|||||||||||||
Sbjct: 105348 attaccattatta 105360
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 463 gatccaaagaaat 475
|||||||||||||
Sbjct: 269881 gatccaaagaaat 269893
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 163 agtagtagtttaa 175
|||||||||||||
Sbjct: 66907 agtagtagtttaa 66919
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 210 tgatgatgattta 222
|||||||||||||
Sbjct: 415938 tgatgatgattta 415926
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 1146 ttcacgtttaaat 1158
|||||||||||||
Sbjct: 173072 ttcacgtttaaat 173084
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 16/17 (94%)
Strand = Plus / Minus
Query: 213 tgatgatttattattaa 229
|||| ||||||||||||
Sbjct: 441899 tgataatttattattaa 441883
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 980 ttattttaatttt 992
|||||||||||||
Sbjct: 152324 ttattttaatttt 152336
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 699 aattgtaacctat 711
|||||||||||||
Sbjct: 381175 aattgtaacctat 381163
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 338 aacaatcatcaga 350
|||||||||||||
Sbjct: 367593 aacaatcatcaga 367581
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1029 tttacctttctta 1041
|||||||||||||
Sbjct: 377862 tttacctttctta 377850
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 989 ttttagttcaaat 1001
|||||||||||||
Sbjct: 289833 ttttagttcaaat 289845
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 361 ttaaatttatttc 373
|||||||||||||
Sbjct: 271342 ttaaatttatttc 271330
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 754 tgtggtggtgtag 766
|||||||||||||
Sbjct: 288796 tgtggtggtgtag 288808
Score = 26.3 bits (13), Expect(19) = 0.004
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 525 attaattaaatta 537
|||||||||||||
Sbjct: 283972 attaattaaatta 283984
Score = 26.3 bits (13), Expect(24) = 2e-06
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 390 agaagcaattaaa 402
|||||||||||||
Sbjct: 128800 agaagcaattaaa 128812
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 39,799,971
Number of Sequences: 38603920
Number of extensions: 39799971
Number of successful extensions: 3256359
Number of sequences better than 10.0: 467
length of query: 1235
length of database: Z,714,659,095
effective HSP length: 23
effective length of query: 1212
effective length of database: Y,826,768,935
effective search space: 50694043949220
effective search space used: 50694043949220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home