Homology CHB609 vs DNA
Query= CHB609 (CHB609Q) /CSM/CH/CHB6-A/CHB609Q.Seq.d/
(1103 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum23.seq;
ddbjhum24.seq; ddbjhum3.seq; ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq;
ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/a/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; ddbjvrt5.seq;
/db/DDBJNEW.DATA/a/new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; ddbjinv6.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln10.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
ddbjbct8.seq; /db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss76.seq;
ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq; ddbjgss8.seq;
ddbjgss80.seq; ddbjgss81.seq; ddbjgss82.seq; ddbjgss83.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/a/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat11.seq; ddbjpat12.seq; ddbjpat13.seq; ddbjpat14.seq;
ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq;
ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; ddbjsts4.seq; /db/DDBJNEW.DATA/a/new_ddbjsts.seq;
ddbjsyn.seq; /db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/a/new_est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/a/new_est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/a/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/a/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq;
est_osat1.seq; /db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; est_rest4.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq
38,492,499 sequences; Z,592,795,642 total letters
Searching........................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AF474345|AF474345.1 Dictyostelium discoideum ABC transporter... 486 e-134 4
V00191|V00191.1 5S ribosomal RNA of slime mold (D. discoideum). 190 3e-44 1
M25202|M25202.1 D.discoideum 5S rRNA. 190 3e-44 1
AY171066|AY171066.1 Dictyostelium discoideum extrachromosoma... 190 3e-44 1
X67782|X67782.1 D.discoideum 5S ribosomal RNA gene. 190 3e-44 1
AY293825|AY293825.1 Dictyostelium discoideum transposon clus... 182 8e-42 1
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 ma... 54 7e-14 19
AC116963|AC116963.2 Dictyostelium discoideum chromosome 2 ma... 36 2e-11 21
AL844509|AL844509.1 Plasmodium falciparum chromosome 13. 40 8e-10 22
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma... 38 3e-09 13
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 38 4e-09 23
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 32 6e-09 23
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma... 36 7e-09 18
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma... 38 1e-08 15
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 32 4e-08 19
AC117076|AC117076.3 Dictyostelium discoideum chromosome 2 ma... 36 4e-08 16
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma... 34 2e-07 21
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma... 36 3e-07 18
AE014839|AE014839.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 6e-07 18
AC116924|AC116924.3 Dictyostelium discoideum chromosome 2 ma... 40 7e-07 12
AC115606|AC115606.2 Dictyostelium discoideum chromosome 2 ma... 34 1e-06 12
AL844507|AL844507.1 Plasmodium falciparum chromosome 8. 36 1e-06 19
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromo... 34 1e-06 18
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 36 2e-06 20
AE014823|AE014823.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 3e-06 17
AF362369|AF362369.2 Dictyostelium discoideum histidine kinas... 32 4e-06 8
AC116330|AC116330.2 Dictyostelium discoideum chromosome 2 ma... 36 4e-06 13
BX842643|BX842643.1 Mycoplasma mycoides subsp. mycoides SC g... 30 6e-06 21
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromo... 34 6e-06 17
AL929357|AL929357.1 Plasmodium falciparum strain 3D7, chromo... 36 6e-06 19
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 34 7e-06 17
AB063522|AB063522.2 Wigglesworthia glossinidia endosymbiont ... 36 2e-05 21
AE014845|AE014845.1 Plasmodium falciparum 3D7 chromosome 12,... 38 2e-05 16
CR382401|CR382401.1 Plasmodium falciparum chromosome 6, comp... 34 2e-05 18
AE014826|AE014826.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 3e-05 17
AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 ma... 36 3e-05 15
AE014016|AE014016.1 Buchnera aphidicola str. Bp (Baizongia p... 36 4e-05 17
AC115594|AC115594.2 Dictyostelium discoideum chromosome 2 ma... 36 8e-05 7
AE014846|AE014846.1 Plasmodium falciparum 3D7 chromosome 12,... 30 8e-05 17
Z98547|Z98547.2 Plasmodium falciparum MAL3P3. 34 3e-04 13
CR382400|CR382400.1 Plasmodium falciparum chromosome 6, comp... 42 3e-04 21
AF083031|AF083031.2 Guillardia theta nucleomorph chromosome ... 38 3e-04 11
AL844506|AL844506.1 Plasmodium falciparum chromosome 7. 36 3e-04 20
AL445563|AL445563.1 Mycoplasma pulmonis (strain UAB CTIP) co... 34 3e-04 16
AC117081|AC117081.2 Dictyostelium discoideum chromosome 2 ma... 38 3e-04 17
AE017197|AE017197.1 Rickettsia typhi str. Wilmington complet... 34 3e-04 26
AJ235271|AJ235271.1 Rickettsia prowazekii strain Madrid E, c... 36 3e-04 17
AE014816|AE014816.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 4e-04 16
AC019197|AC019197.7 Homo sapiens BAC clone RP11-361O8 from 2... 38 4e-04 11
BX248585|BX248585.1 Blochmannia floridanus complete genome; ... 36 4e-04 15
AE014850|AE014850.1 Plasmodium falciparum 3D7 chromosome 12,... 34 6e-04 15
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma... 34 6e-04 11
AL929358|AL929358.1 Plasmodium falciparum strain 3D7, chromo... 36 6e-04 17
AC009941|AC009941.5 Homo sapiens, clone RP11-115D10, complet... 38 7e-04 11
AE017263|AE017263.1 Mesoplasma florum L1 complete genome. 34 7e-04 24
AB030033|AB030033.1 Dictyostelium discoideum gene for AmiB, ... 36 9e-04 7
AE017289|AE017289.1 Leptospira interrogans serovar Copenhage... 34 0.001 12
AE014821|AE014821.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 0.001 16
AE014832|AE014832.1 Plasmodium falciparum 3D7 chromosome 10 ... 32 0.001 16
AE017337|AE017337.1 Mycoplasma mobile 163K section 1 of 3 of... 32 0.001 15
AC096443|AC096443.4 Rattus norvegicus clone CH230-107K17, **... 40 0.002 10
AE015940|AE015940.1 Clostridium tetani E88, section 5 of 10 ... 34 0.002 17
AL844148|AL844148.2 Human DNA sequence *** SEQUENCING IN PRO... 34 0.002 10
AE014842|AE014842.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 0.002 15
AE014820|AE014820.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 0.002 18
AC004688|AC004688.8 Plasmodium falciparum chromosome 12 clon... 32 0.002 15
AL158085|AL158085.4 Human DNA sequence *** SEQUENCING CANCEL... 38 0.002 9
AE017338|AE017338.1 Mycoplasma mobile 163K section 2 of 3 of... 30 0.002 18
AC092457|AC092457.1 Homo sapiens chromosome 8 clone RP4-741E... 38 0.002 9
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 ma... 42 0.002 16
AC150954|AC150954.1 Bos taurus clone CH240-149O11, WORKING D... 34 0.003 13
AC012055|AC012055.9 Homo sapiens chromosome 4, clone RP11-24... 36 0.003 10
CR450789|CR450789.2 Zebrafish DNA sequence *** SEQUENCING IN... 34 0.003 15
AL929356|AL929356.1 Plasmodium falciparum strain 3D7, chromo... 30 0.003 18
AC025050|AC025050.2 Homo sapiens clone RP11-30P10, WORKING D... 34 0.003 12
AP000989|AP000989.1 Sulfolobus tokodaii str. 7 DNA, complete... 36 0.003 12
AE014838|AE014838.1 Plasmodium falciparum 3D7 chromosome 11 ... 34 0.004 13
AC090378|AC090378.1 Homo sapiens chromosome 18 clone RP11-88... 38 0.004 5
AC125488|AC125488.3 Mus musculus BAC clone RP23-75M24 from 1... 36 0.004 11
AE014843|AE014843.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 0.004 15
AC116657|AC116657.3 Mus musculus BAC clone RP23-289E18 from ... 36 0.004 11
BX927095|BX927095.3 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.004 11
AL035477|AL035477.6 Plasmodium falciparum MAL4P4. 34 0.004 15
AC079531|AC079531.1 Mus musculus clone RP23-345C6, WORKING D... 32 0.005 11
CR382399|CR382399.1 Plasmodium falciparum chromosome 6, comp... 36 0.005 18
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma... 32 0.005 14
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clon... 32 0.006 17
AL031745|AL031745.8 Plasmodium falciparum DNA from MAL1P2. 34 0.007 21
AL929548|AL929548.8 Zebrafish DNA sequence from clone CH211-... 38 0.007 10
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c... 30 0.007 15
AX223856|AX223856.1 Sequence 1124 from Patent WO0151627. 32 0.007 13
AX197417|AX197417.1 Sequence 1124 from Patent WO0151627. 32 0.007 13
AC016770|AC016770.10 Homo sapiens BAC clone RP11-564H1 from ... 38 0.007 7
AE014824|AE014824.1 Plasmodium falciparum 3D7 chromosome 14 ... 36 0.007 16
AL162378|AL162378.16 Human DNA sequence from clone RP11-394C... 34 0.008 11
AE014833|AE014833.1 Plasmodium falciparum 3D7 chromosome 10 ... 32 0.008 16
AE014818|AE014818.1 Plasmodium falciparum 3D7 chromosome 14 ... 30 0.008 16
AB063521|AB063521.2 Wigglesworthia glossinidia endosymbiont ... 36 0.008 17
AC140978|AC140978.3 Mus musculus chromosome 14 clone RP23-42... 46 0.008 10
>AF474345|AF474345.1 Dictyostelium discoideum ABC transporter ABCC.13
(abcC13) gene, partial cds.
Length = 2565
Score = 486 bits (245), Expect(4) = e-134
Identities = 253/256 (98%)
Strand = Plus / Minus
Query: 821 caaaagaaattattcatgttaccaggtaaagatgaaactgaatcaccatggcattatatt 880
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 2564 caaaagaaattattcatgttancaggtaaagatgaaactgaatcagcatggcattatatt 2505
Query: 881 aagtttatcgaatgtcaagatagtgatagaaactttaaagaggaatgtgaaaaatggggt 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2504 aagtttatcgaatgtcaagatagtgatagaaactttaaagaggaatgtgaaaaatggggt 2445
Query: 941 atcaaacgttacccaacttggcataaatttgaaaatgattataaatcctcagaaaataaa 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2444 atcaaacgttacccaacttggcataaatttgaaaatgattataaatcctcagaaaataaa 2385
Query: 1001 attttagaaactcattcaggtgttatgggcattgctgaactttcaaaaatgtcgggttgt 1060
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2384 attttaaaaactcattcaggtgttatgggcattgctgaactttcaaaaatgtcgggttgt 2325
Query: 1061 caatatcctcttaaag 1076
||||||||||||||||
Sbjct: 2324 caatatcctcttaaag 2309
Score = 32.2 bits (16), Expect(4) = e-134
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 1075 agaaaataattcaaat 1090
||||||||||||||||
Sbjct: 2210 agaaaataattcaaat 2195
Score = 26.3 bits (13), Expect(4) = e-134
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1091 aaaatgaaaataa 1103
|||||||||||||
Sbjct: 2193 aaaatgaaaataa 2181
Score = 26.3 bits (13), Expect(4) = e-134
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 210 aattaatttactt 222
|||||||||||||
Sbjct: 2104 aattaatttactt 2116
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 46,400,205
Number of Sequences: 38492499
Number of extensions: 46400205
Number of successful extensions: 4249208
Number of sequences better than 10.0: 2258
length of query: 1103
length of database: Z,592,795,642
effective HSP length: 23
effective length of query: 1080
effective length of database: Y,707,468,165
effective search space: 45044065618200
effective search space used: 45044065618200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home