Dictyostelium discoideum cDNA Clone CHB609

Sequence CHB609

TGGAAACACA TCATCCCGTT CGATCTGATA AGTAAATCGA CCTCAGGCCT
TCCAAGTACT CTGGTTGGAG ACAACAGGGG AACATAGAGT GCTGTATACT
ATTCTTTAAT GTTATATAAC AATAGTGCGT TAGTCACACA TTTTTCGATG
GTAACACTAA ATAAAAGAAC ATTAGTTCAA TATATGCAAA TTATAGGTAT
TTTAGGTGTA ATTAATTTAC TTCTATCACT TTATATGGCA TTTGGTGACA
TTGAAAGTGG AACATGTGAT ATCAATGCAA CCCTATCCTG TACATCAGTA
ATCAAAAGTG AATATGGCAA AATATTTGGT GTACCAGTTT CATACTATGG
TATCACTTGG AATCTAGTTT TACTCTATTG TATTTGGAGA ATTTATTTAG
AAGATAAAGT ACCAGCATTT GTAACAACCA ATTTTCATTT GGTGTTCAAT
TGGTATTGGT TTTGTATTTT ATTTTATTGC AGCAGAATTA ATAATTGGTA
AAATTTGTCC ATTTTGTACA TTAGTTCATA TTATTAATGT AGCATTAATG
TATTTAGTAT TTCAAGTTTA TTGTCAACTT AAATCACCAC CACCATTATT
TTTAGTAGCA AATTCATTGA AATCATTCAT TGTGACAGTA TTATTAGTGC
ATTTAATGTT AATATTATTT GTTAATGGTG GTAATACAAA TGGTGGTGTT
GGTGGTGGTA TCATAATTAA TGGTATTAAT AAAAAGATAA CAAATGAATC
ATTTTCACAA TGTTTAACAA GAATGAATAT GGTAATGTTT GGTTCATCTT
CATGTGGTGC ATGTATGAAT CAAAAGAAAT TATTCATGTT ACCAGGTAAA
GATGAAACTG AATCACCATG GCATTATATT AAGTTTATCG AATGTCAAGA
TAGTGATAGA AACTTTAAAG AGGAATGTGA AAAATGGGGT ATCAAACGTT
ACCCAACTTG GCATAAATTT GAAAATGATT ATAAATCCTC AGAAAATAAA
ATTTTAGAAA CTCATTCAGG TGTTATGGGC ATTGCTGAAC TTTCAAAAAT
GTCGGGTTGT CAATATCCTC TTAAAGAAAA TAATTCAAAT AAAATGAAAA
TAA

Translated Amino Acid Sequence CHB609

gntssrsi**vnrpqafqvlwlettgehrvlytil*cyitivr*shifrw*h*ikeh*fn
ickl*vf*v*liyfyhfiwhlvtlkvehvismqpypvhq*skvnmakylvyqfhtmvslg
i*fysivfgefi*kikyqhl*QPIFIWCSIGIGFVFYFIAAELIIGKICPFCTLVHIINV
ALMYLVFQVYCQLKSPPPLFLVANSLKSFIVTVLLVHLMLILFVNGGNTNGGVGGGIIIN
GINKKITNESFSQCLTRMNMVMFGSSSCGACMNQKKLFMLPGKDETESPWHYIKFIECQD
SDRNFKEECEKWGIKRYPTWHKFENDYKSSENKILETHSGVMGIAELSKMSGCQYPLKEN
NSNKMKI

Homology CHB609 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CHB609 (CHB609Q) /CSM/CH/CHB6-A/CHB609Q.Seq.d/                       2187   0.0
AFI317 (AFI317Q) /CSM/AF/AFI3-A/AFI317Q.Seq.d/                       1261   0.0
CFH265 (CFH265Q) /CSM/CF/CFH2-C/CFH265Q.Seq.d/                       1156   0.0
CHC679 (CHC679Q) /CSM/CH/CHC6-D/CHC679Q.Seq.d/                       1110   0.0
CHC761 (CHC761Q) /CSM/CH/CHC7-C/CHC761Q.Seq.d/                        198   1e-49
SHK457 (SHK457Q) /CSM/SH/SHK4-C/SHK457Q.Seq.d/                        196   5e-49
SHH506 (SHH506Q) /CSM/SH/SHH5-A/SHH506Q.Seq.d/                        196   5e-49
SHF471 (SHF471Q) /CSM/SH/SHF4-C/SHF471Q.Seq.d/                        196   5e-49
SFL195 (SFL195Q) /CSM/SF/SFL1-D/SFL195Q.Seq.d/                        196   5e-49
CHN326 (CHN326Q) /CSM/CH/CHN3-B/CHN326Q.Seq.d/                        196   5e-49

Homology CHB609 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF474345|AF474345.1 Dictyostelium discoideum ABC transporter...   486   e-134  4
V00191|V00191.1 5S ribosomal RNA of slime mold (D. discoideum).   190   3e-44  1
M25202|M25202.1 D.discoideum 5S rRNA.                             190   3e-44  1
AY171066|AY171066.1 Dictyostelium discoideum extrachromosoma...   190   3e-44  1
X67782|X67782.1 D.discoideum 5S ribosomal RNA gene.               190   3e-44  1
AY293825|AY293825.1 Dictyostelium discoideum transposon clus...   182   8e-42  1
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 ma...    54   7e-14  19
AC116963|AC116963.2 Dictyostelium discoideum chromosome 2 ma...    36   2e-11  21
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           40   8e-10  22
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma...    38   3e-09  13

Homology CHB609 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP011745_41(AP011745|pid:none) Candidatus Caldiarchaeum subterra...    44   2e-06
CP000815_263(CP000815|pid:none) Paulinella chromatophora chromat...    45   0.005
BA000039_142(BA000039|pid:none) Thermosynechococcus elongatus BP...    44   0.012
CP000751_60(CP000751|pid:none) Kineococcus radiotolerans SRS3021...    35   0.017
CP001399_484(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, ...    38   0.023
CP001401_476(CP001401|pid:none) Sulfolobus islandicus M.16.27, c...    38   0.023
CP000435_2497(CP000435|pid:none) Synechococcus sp. CC9311, compl...    43   0.035
CP001630_5856(CP001630|pid:none) Actinosynnema mirum DSM 43827, ...    42   0.046
AY223810_107(AY223810|pid:none) Rhodococcus erythropolis linear ...    42   0.046
AE009441_897(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,...    31   0.053

Homology CHB609 vs Genome