Dictyostelium discoideum cDNA Clone CHB274

Sequence CHB274

ACTGTTGGCC TACTGGAAAT TTATTTCACA AAAAGTATAA TACAAGATGG
GTAAAGAAAA AACACATATT AATATCGTCG TTATTGGTCA CGTAGATGCT
GGTAAATCAA CCACCACTGG TCATTTAATC TACAAATGTG GTGGTATCGA
TAAAAGAGTT ATCGAAAAAT ACGAAAAGGA AGCTTCTGAA ATGGGTAAAC
AATCATTCAA ATATGCTTGG GTTATGGATA AATTAAAAGC TGAACGTGAA
AGAGGTATTA CCATCGATAT TGCTTTATGG AAATTCGAAA CCTCAAAATA
CTACTTCACC ATTATTGATG CTCCAGGTCA CAGAGATTTC ATCAAGAATA
TGATTACTGG TACCTCACAA GCCGATTGTG CTGTCTTAGT CATTGCCTCC
CCAACTGGTG AGTTCGAAGC TGGTATTGCC AAGAACGGTC AAACTCGTGA
ACACGCTCTC CTTGCTTACA CTTTAGGTGT CAAACAAATG ATCGTTGCTA
TCAACAAGAT GGATGAAAAA TCAACCAACT ACTCACAAGC CCGTTACG--
--------TC GATGCCATCG TCGAACCAAA ACGTCCACAC GATAAACCAT
TACGTATTCC ATTACAAGAT GTCTACAAGA TCGGTGGTAT CGGTACTGTT
CCAGTAGGTC GTGTCGAAAC TGGTATCATT AAACCAGGTA TGGTCGTCAC
CTTTGCCCCA GCTGGTCTCT CAACTGAAGT TAAATCAGTC GAAATGCATC
ACGAACAACT CCCAGAAGCC CGTCCAGGTG ACAATGTAGG TTTCAACGTT
AAAAACGTTT CAGTCAAAGA AATTAAAAGA GGTATGGTCG CTGGTGACTC
CAAAAACGAT CCACCACAAG AAACTGAAAA ATTCGTTGCT CAAGTTATCG
TCCTCAACCA TCCAGGTCAA ATCCATGCTG GTTACTCACC AGTCTTAGAT
TGTCACACTG CTCACATTGC CTGTAAATTC ACTGAAATCG TCGATAAAGT
TGATCGTCGT ACTGGTGCCG TCGTTGCCAA AGAAGGTACT GCCGCCGTCG
TCTTAAAGAA TGGTGATGCT GCTATGGTCG AATTAACCCC ATCTCGTCCA
ATGTGTGTTG AATCATTCAC TGAATACCCA CCATTAGGTC GTTTCGCCGT
CAGAGATATG AGACAAACCG TTGCCGTCGG TGTCATCAAA TCAACCGTCA
AGAAAGCCCC AGGTAAAGCA GGTGATAAGA AAGGTGCTGC TGCTCCATCA
AAGAAGAAAT AAATAATTTA AAAAAAATTT TATAATTATC TAAAA

Translated Amino Acid Sequence CHB274

llaywkfisqkv*YKMGKEKTHINIVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKE
ASEMGKQSFKYAWVMDKLKAERERGITIDIALWKFETSKYYFTIIDAPGHRDFIKNMITG
TSQADCAVLVIASPTGEFEAGIAKNGQTREHALLAYTLGVKQMIVAINKMDEKSTNYSQA
RY---

---DAIVEPKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEV
KSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNH
PGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTP
SRPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAPSKKK*ii*
kkfynylk

Homology CHB274 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CHB274 (CHB274Q) /CSM/CH/CHB2-D/CHB274Q.Seq.d/                       2460   0.0
CHE287 (CHE287Q) /CSM/CH/CHE2-D/CHE287Q.Seq.d/                       1409   0.0
VFD312 (VFD312Q) /CSM/VF/VFD3-A/VFD312Q.Seq.d/                       1407   0.0
CFH117 (CFH117Q) /CSM/CF/CFH1-A/CFH117Q.Seq.d/                       1407   0.0
CFC844 (CFC844Q) /CSM/CF/CFC8-B/CFC844Q.Seq.d/                       1407   0.0
CFC589 (CFC589Q) /CSM/CF/CFC5-D/CFC589Q.Seq.d/                       1407   0.0
VFI867 (VFI867Q) /CSM/VF/VFI8-C/VFI867Q.Seq.d/                       1402   0.0
CFF722 (CFF722Q) /CSM/CF/CFF7-A/CFF722Q.Seq.d/                       1402   0.0
SFG573 (SFG573Q) /CSM/SF/SFG5-D/SFG573Q.Seq.d/                       1400   0.0
CHB464 (CHB464Q) /CSM/CH/CHB4-C/CHB464Q.Seq.d/                       1400   0.0

Homology CHB274 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


X55972|X55972.1 D. discoideum EF1-II gene for elongation fac...  1402   0.0    1
X55973|X55973.1 D. discoideum EF1-I gene for elongation fact...  1322   0.0    1
AF016242|AF016242.1 Dictyostelium discoideum protein synthes...  1166   0.0    2
M29934|M29934.1 C.albicans elongation factor 1-alpha (TEF-1)...   260   0.0    9
M29935|M29935.1 C.albicans elongation factor 1-alpha (TEF-2)...   236   e-180  9
AF402092|AF402092.1 Pichia anomala strain NRRL Y-366 transla...   224   e-161  8
AX109715|AX109715.1 Sequence 448 from Patent WO0123604.           190   e-156  9
AX109714|AX109714.1 Sequence 447 from Patent WO0123604.           188   e-156  9
AF402023|AF402023.1 Kluyveromyces piceae strain NRRL Y-17977...   204   e-146  6
AX109679|AX109679.1 Sequence 412 from Patent WO0123604.           155   e-146  7

Homology CHB274 vs Protein

Sequences producing significant alignments:                      (bits) Value


AK297878_1(AK297878|pid:none) Homo sapiens cDNA FLJ52573 complet...   326   e-155
X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio...   429   e-118
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati...   429   e-118
(P18624) RecName: Full=Elongation factor 1-alpha;          Short...   429   e-118
HM241587_1(HM241587|pid:none) Bicyclus trilophus elongation fact...   258   e-112
HM241573_1(HM241573|pid:none) Bicyclus safitza isolate M elongat...   258   e-110
HM241572_1(HM241572|pid:none) Bicyclus procora elongation factor...   254   e-110
HM241563_1(HM241563|pid:none) Bicyclus mandanes elongation facto...   253   e-110
HM241589_1(HM241589|pid:none) Bicyclus vansoni elongation factor...   260   e-110
HM241583_1(HM241583|pid:none) Bicyclus sophrosyne elongation fac...   258   e-110

Homology CHB274 vs Genome