Dictyostelium discoideum cDNA Clone CHA188

Sequence CHA188

---------- AAGAAAATCG GTGAGAAGCA TTACACTTTA AATGCACCAG
TGCGTTCCAT TATTCAAGAT GCCAATCAAT GTACCATTAA AACTGATAAC
GGTTCAACTT ATCGTTCAAA ATACATTGTT GTTGCAATTC CACCAACATT
GGCTGGCCGT ATTCATTATT CACCATCTAT GCCACCAAGA CGTGATGAAC
TCACTCAAAG AATGCCAATG GGTTCCGTCA TTAAAACCAT CACCATCTAT
GATGAACCAT TCTGGAGAAA AGAAGGTTAT TCAGCTGAAG CCATCTCTGA
TAAAGGTCCA ATCTTTATCT GCTATGATGA CTCTTCACAT GACGATAAGA
AAACAGCTAT CGTTGGTTTC ATTGCTGCTT CAGCCGCTAA AGATTGGGCT
GAAAAATCAC CAGAAGAAAG AAAGAGAGCC GTCTTAGACT GTTATGCTCG
TTGGTGGGGT CCAAAAGCAT TATCTCCAAG AATCTTTTTA GAGAAAAGTT
GGAAAGAAGA AGAATATTCA CGTGGTTGTT ATTTAGGTTA CACTAGTCCA
GGTACTCTCT ACCAATGTGG TGAACATTTA CGTGCTCCAG TTGGTAGAAT
TCATTGGGCT GGTACAGAAA CTGCTTCAGT TTGGATGGTT ATATGGAAGG
TGCCTTAGAA TCAGGTTTTA GAGTTTCAAA AGAAATTAAA GATAATATTA
ATTCAAAAT

Translated Amino Acid Sequence CHA188

---KIGEKHYTLNAPVRSIIQDANQCTIKTDNGSTYRSKYIVVAIPPTLAGRIHYSPSMP
PRRDELTQRMPMGSVIKTITIYDEPFWRKEGYSAEAISDKGPIFICYDDSSHDDKKTAIV
GFIAASAAKDWAEKSPEERKRAVLDCYARWWGPKALSPRIFLEKSWKEEEYSRGCYLGYT
SPGTLYQCGEHLRAPVGRIHWAGTETASVWMVIWKVP*nqvlefqkklkiiliqn

Homology CHA188 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CHA188 (CHA188Q) /CSM/CH/CHA1-D/CHA188Q.Seq.d/                       1386   0.0
CFG795 (CFG795Q) /CSM/CF/CFG7-D/CFG795Q.Seq.d/                       1366   0.0
CFI683 (CFI683Q) /CSM/CF/CFI6-D/CFI683Q.Seq.d/                       1358   0.0
CFI459 (CFI459Q) /CSM/CF/CFI4-C/CFI459Q.Seq.d/                       1352   0.0
VFA759 (VFA759Q) /CSM/VF/VFA7-C/VFA759Q.Seq.d/                       1346   0.0
VFG414 (VFG414Q) /CSM/VF/VFG4-A/VFG414Q.Seq.d/                       1344   0.0
SFK548 (SFK548Q) /CSM/SF/SFK5-B/SFK548Q.Seq.d/                       1344   0.0
CFI735 (CFI735Q) /CSM/CF/CFI7-B/CFI735Q.Seq.d/                       1344   0.0
CFI583 (CFI583Q) /CSM/CF/CFI5-D/CFI583Q.Seq.d/                       1344   0.0
CFH765 (CFH765Q) /CSM/CF/CFH7-C/CFH765Q.Seq.d/                       1344   0.0

Homology CHA188 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    38   0.007  2
AC092921|AC092921.6 Homo sapiens chromosome 3 clone RP11-216...    42   0.013  2
AC116453|AC116453.3 Mus musculus clone RP24-299G8, WORKING D...    34   0.087  7
AC147111|AC147111.1 Mus musculus chromosome UNK clone RP24-1...    34   0.088  7
AC034260|AC034260.2 Homo sapiens clone RP11-10J15, WORKING D...    34   0.12   8
BZ439413|BZ439413.1 BONNE28TR BO_1.6_2_KB_tot Brassica olera...    48   0.16   1
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromo...    46   0.18   7
AL512600|AL512600.5 Human DNA sequence from clone RP11-452A1...    32   0.22   8
AC099253|AC099253.6 Rattus norvegicus clone CH230-202N20, **...    34   0.26   5
AL732399|AL732399.11 Mouse DNA sequence from clone RP23-311A...    38   0.29   6

Homology CHA188 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP010948_357(AP010948|pid:none) Azospirillum sp. B510 plasmid pA...   201   8e-52
CP002988_2755(CP002988|pid:none) Halophilic archaeon DL31, compl...   191   2e-48
AP006618_3091(AP006618|pid:none) Nocardia farcinica IFM 10152 DN...   184   1e-46
CP001854_3609(CP001854|pid:none) Conexibacter woesei DSM 14684, ...   183   6e-46
FQ859184_1118(FQ859184|pid:none) Streptomyces cattleya NRRL 8057...   185   2e-45
I51346(I51346) monoamine oxidase - rainbow trout  &L37878_1(L378...   177   2e-44
AY185211_1(AY185211|pid:none) Danio rerio monoamine oxidase mRNA...   176   2e-44
(Q6NSN2) RecName: Full=Amine oxidase [flavin-containing];       ...   174   5e-44
(Q6PLK3) RecName: Full=Amine oxidase [flavin-containing] B;     ...   172   1e-43
AB047270_1(AB047270|pid:none) Cavia porcellus MAO-A mRNA for put...   173   1e-43

Homology CHA188 vs Genome