Dictyostelium discoideum cDNA Clone CFK494

Sequence CFK494

AGAATGGGAT ACAAATCCAA GATGGAAGGG AATTAAAAGA GAATATACTG
CAGAGGATGT AATTCGTTTA AGAGGATCAT TTAAGGAGGA GCATACATTA
GCAAAGAAAG GTGCAGAGAA ACTTTGGGAT ATGTTACATG AAAAAGATAA
TTGGGTACCA GCATTGGGTG CACTTTCTGG TAATCAAGCA GTTCAAATGG
TACGTGGTGG TCTTAGAGCA ATCTATTTAA GTGGATGGCA AGTTGCTGCC
GATAATAATA CCTCTGGCCA AATGTATCCA GATCAATCAT TGTATGCCGT
AAATAGTGTA CCTGAATTAG TTCGTAGAAT TAATAATGCC CTTAGAAGAC
GTGATCAAAT TGAAGTCAAT GAAGGTAATC TTGAATTCCA ATATCTTCCA
ACACCAATTG TTGCAGATGC AGAAGCAGGT TTTGGTGGCC CATTGAATGC
CTATGAACTT ATGAGAAGTA TGATCGAAGC TGGTGCATCA GGTGTTCATT
GGGAAGATCA ATTGGCAAGC GAAAAGAAGT GTGGTCATAT GGGTGGTAAA
GTACTCATTC CAACATGTGG TCATATAAAG AATCTTACTG CCGCTCGTTT
AGCATC---- ------TTAT GGGAGTACCA ACATTGATTG TAGCTCGTAC
CGATTCTTTG GGAGCTGGTT TGTTGATGAG TGATGTTGAT GCACGTGATA
AGAAATTCAT CACTGGTAAA CGTACTGTCG AGGGTTATTA TCACTTGAAT
TGTGGTATTG AGCAAGCCAT TGAAAGAGCA CTCAATTATG CACCCTATTG
TGACTTGTTA TGGTGTGAAA CTTCAACACC ATCCATTGAA TTAGCCAAAC
AATTCGCCGA TGCCGTTCAT GAAAAATTCC CAGGTAAACT TTTAGCATAC
AATTGTTCAC CATCTTTCCA TTGGAAACAA CATTTGAAAC CAGATGAAAT
CGCCTCTTTC CAACGTCAAC TCTCTGATTT GGGCTACAAG TTCCAATTCA
TCACTTTGGC TGGTTTCCAT GCTCTCAATT TAACAATGTT TGAATTGGCA
AAGGATTACA AAAAGAATGC TATGACTGCC TATGTAAATC TTCAAGAGAA
AGAATTCTCT TTAGAATCTG AAGGCTATAC TGCAACTAGA CATCAACGTG
AAGTAGGTAC TGGTTACTTT GATCAAGTTT CTCAAATTAT CTCTGGTGGT
CAATCTTCAA CATTAGCTTT AGTAGGTTCA ACTGAAGAAG AACAATTTGA
TGAACATATG AAAAGAAAAA GAAAGTTGCT CATAATAATA AGGAAATAAT
AAAAACAAAG CTGCAAGTGT TCAAAACTAA TTAATTTTTA TTTTAAAAAA
AAA

Translated Amino Acid Sequence CFK494

EWDTNPRWKGIKREYTAEDVIRLRGSFKEEHTLAKKGAEKLWDMLHEKDNWVPALGALSG
NQAVQMVRGGLRAIYLSGWQVAADNNTSGQMYPDQSLYAVNSVPELVRRINNALRRRDQI
EVNEGNLEFQYLPTPIVADAEAGFGGPLNAYELMRSMIEAGASGVHWEDQLASEKKCGHM
GGKVLIPTCGHIKNLTAARLA---

---MGVPTLIVARTDSLGAGLLMSDVDARDKKFITGKRTVEGYYHLNCGIEQAIERALNY
APYCDLLWCETSTPSIELAKQFADAVHEKFPGKLLAYNCSPSFHWKQHLKPDEIASFQRQ
LSDLGYKFQFITLAGFHALNLTMFELAKDYKKNAMTAYVNLQEKEFSLESEGYTATRHQR
EVGTGYFDQVSQIISGGQSSTLALVGSTEEEQFDEHMKRKRKLLIIIRK**kqsckcskl
infyfkkk

Homology CFK494 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFK494 (CFK494Q) /CSM/CF/CFK4-D/CFK494Q.Seq.d/                       2605   0.0
CFF742 (CFF742Q) /CSM/CF/CFF7-B/CFF742Q.Seq.d/                       2357   0.0
AFM530 (AFM530Q) /CSM/AF/AFM5-B/AFM530Q.Seq.d/                       1429   0.0
SLE660 (SLE660Q) /CSM/SL/SLE6-C/SLE660Q.Seq.d/                       1380   0.0
SLB235 (SLB235Q) /CSM/SL/SLB2-B/SLB235Q.Seq.d/                       1312   0.0
SLC678 (SLC678Q) /CSM/SL/SLC6-D/SLC678Q.Seq.d/                       1243   0.0
AFD652 (AFD652Q) /CSM/AF/AFD6-C/AFD652Q.Seq.d/                       1241   0.0
SLG842 (SLG842Q) /CSM/SL/SLG8-B/SLG842Q.Seq.d/                       1231   0.0
CFB380 (CFB380Q) /CSM/CF/CFB3-D/CFB380Q.Seq.d/                       1221   0.0
CFG335 (CFG335Q) /CSM/CF/CFG3-B/CFG335Q.Seq.d/                       1207   0.0

Homology CFK494 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC117072|AC117072.2 Dictyostelium discoideum chromosome 2 ma...  1275   0.0    4
AF187048|AF187048.1 Strongyloides stercoralis isocitrate lya...    56   3e-14  5
BI743142|BI743142.1 kx39c04.y1 Parastrongyloides trichosuri ...    70   9e-13  4
Z83216|Z83216.1 Caenorhabditis elegans cosmid C08F11.              52   9e-12  6
BI742672|BI742672.1 kx33h05.y1 Parastrongyloides trichosuri ...    70   3e-11  2
BI322662|BI322662.1 kx14g02.y3 Parastrongyloides trichosuri ...    70   3e-11  2
BI742736|BI742736.1 kx34f02.y1 Parastrongyloides trichosuri ...    70   3e-11  2
BI743244|BI743244.1 kx40d11.y1 Parastrongyloides trichosuri ...    70   3e-11  2
BI743240|BI743240.1 kx40d06.y1 Parastrongyloides trichosuri ...    70   3e-11  2
BI175051|BI175051.1 OSTF064G9_1 AD-wrmcDNA Caenorhabditis el...    52   2e-10  3

Homology CFK494 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC117076_17(AC117076|pid:none) Dictyostelium discoideum chromoso...   416   0.0
AP006840_590(AP006840|pid:none) Symbiobacterium thermophilum IAM...   297   e-160
CP000088_1375(CP000088|pid:none) Thermobifida fusca YX, complete...   303   e-155
CP001683_2723(CP001683|pid:none) Saccharomonospora viridis DSM 4...   298   e-154
CP001874_1840(CP001874|pid:none) Thermobispora bispora DSM 43833...   290   e-151
CP002017_961(CP002017|pid:none) Bacillus tusciae DSM 2912, compl...   286   e-151
CP002810_853(CP002810|pid:none) Isoptericola variabilis 225, com...   291   e-151
CP001738_2442(CP001738|pid:none) Thermomonospora curvata DSM 431...   291   e-150
CP002042_968(CP002042|pid:none) Meiothermus silvanus DSM 9946, c...   287   e-150
CP002000_1624(CP002000|pid:none) Amycolatopsis mediterranei U32,...   293   e-150

Homology CFK494 vs Genome