Homology CFJ231 vs Protein
Query= CFJ231 (CFJ231Q) /CSM/CF/CFJ2-B/CFJ231Q.Seq.d/
(1276 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP001154_1490(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 74 2e-11
BX640412_161(BX640412|pid:none) Bordetella pertussis strain Toha... 70 2e-10
BX640443_240(BX640443|pid:none) Bordetella bronchiseptica strain... 70 2e-10
FN545225_18(FN545225|pid:none) Arsenophonus nasoniae whole genom... 68 1e-09
CP001562_872(CP001562|pid:none) Bartonella grahamii as4aup, comp... 67 2e-09
FN645507_4(FN645507|pid:none) Bartonella schoenbuchensis R1 cont... 64 1e-08
FN645509_387(FN645509|pid:none) Bartonella schoenbuchensis R1 co... 64 1e-08
BX897699_671(BX897699|pid:none) Bartonella henselae strain Houst... 64 2e-08
CP001277_1425(CP001277|pid:none) Candidatus Hamiltonella defensa... 62 9e-08
CP001349_3671(CP001349|pid:none) Methylobacterium nodulans ORS 2... 61 2e-07
BX897699_370(BX897699|pid:none) Bartonella henselae strain Houst... 60 2e-07
HM004430_126(HM004430|pid:none) Bathycoccus sp. RCC1105 virus Bp... 60 2e-07
CP001001_5658(CP001001|pid:none) Methylobacterium radiotolerans ... 58 1e-06
FN645509_177(FN645509|pid:none) Bartonella schoenbuchensis R1 co... 58 1e-06
FN645509_25(FN645509|pid:none) Bartonella schoenbuchensis R1 con... 58 1e-06
AM260525_507(AM260525|pid:none) Bartonella tribocorum CIP 105476... 57 2e-06
BT061486_1(BT061486|pid:none) Zea mays full-length cDNA clone ZM... 57 3e-06
AM260525_1821(AM260525|pid:none) Bartonella tribocorum CIP 10547... 56 5e-06
HM004432_124(HM004432|pid:none) Bathycoccus sp. RCC1105 virus Bp... 55 1e-05
AM260525_332(AM260525|pid:none) Bartonella tribocorum CIP 105476... 54 2e-05
CP002083_1528(CP002083|pid:none) Hyphomicrobium denitrificans AT... 54 2e-05
CP001562_671(CP001562|pid:none) Bartonella grahamii as4aup, comp... 54 2e-05
CP000061_182(CP000061|pid:none) Aster yellows witches'-broom phy... 53 4e-05
AM260525_376(AM260525|pid:none) Bartonella tribocorum CIP 105476... 52 6e-05
AP006628_71(AP006628|pid:none) Onion yellows phytoplasma OY-M DN... 51 1e-04
AP004705_7(AP004705|pid:none) Oryza sativa Japonica Group genomi... 50 4e-04
AP008214_566(AP008214|pid:none) Oryza sativa (japonica cultivar-... 50 4e-04
AL606623_20(AL606623|pid:none) Oryza sativa genomic DNA, chromos... 49 5e-04
CP000061_223(CP000061|pid:none) Aster yellows witches'-broom phy... 48 0.001
CP002449_1617(CP002449|pid:none) Alicycliphilus denitrificans BC... 48 0.001
CP000884_1908(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 47 0.002
AP006628_345(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 47 0.002
AC068197_4(AC068197|pid:none) Genomic sequence for Arabidopsis t... 47 0.002
FN645496_167(FN645496|pid:none) Bartonella sp. 1-1C contig11, wh... 47 0.002
AY735513_1(AY735513|pid:none) Arabidopsis thaliana hypothetical ... 47 0.002
AK353497_1(AK353497|pid:none) Thellungiella halophila mRNA, comp... 47 0.003
JO495235_1(JO495235|pid:none) TSA: Silene latifolia contig02118Y... 46 0.004
DQ111953_6(DQ111953|pid:none) Phytoplasma sp. CPh FliA (fliA) ge... 46 0.004
JO495234_1(JO495234|pid:none) TSA: Silene latifolia contig02118X... 46 0.004
JO841005_1(JO841005|pid:none) TSA: Amblyomma maculatum Am-21382 ... 45 0.007
AP006628_518(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 45 0.009
GU244497_206(GU244497|pid:none) Cafeteria roenbergensis virus BV... 45 0.012
EU304328_144(EU304328|pid:none) Ostreococcus virus OsV5, complet... 45 0.012
AP006628_391(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 45 0.012
JF974320_58(JF974320|pid:none) Micromonas pusilla virus SP1, ***... 45 0.012
EF200535_4(EF200535|pid:none) Malaysian periwinkle yellows phyto... 45 0.012
CP001706_2099(CP001706|pid:none) Jonesia denitrificans DSM 20603... 43 0.034
FN386611_126(FN386611|pid:none) Ostreococcus tauri virus 1 compl... 43 0.034
HQ633072_118(HQ633072|pid:none) Micromonas pusilla virus PL1, **... 43 0.044
JO842338_1(JO842338|pid:none) TSA: Amblyomma maculatum Am-61606 ... 42 0.058
CP002684_7464(CP002684|pid:none) Arabidopsis thaliana chromosome... 42 0.075
AK118996_1(AK118996|pid:none) Arabidopsis thaliana At1g67660 mRN... 42 0.075
AM076770_92(AM076770|pid:none) Bacteriophage PY100. 42 0.098
CP000061_113(CP000061|pid:none) Aster yellows witches'-broom phy... 41 0.13
AP008957_2287(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 41 0.17
CP001277_1786(CP001277|pid:none) Candidatus Hamiltonella defensa... 40 0.37
AM422018_328(AM422018|pid:none) Candidatus Phytoplasma australie... 39 0.49
FN554974_1649(FN554974|pid:none) Trypanosoma brucei gambiense DA... 39 0.83
CP000926_3431(CP000926|pid:none) Pseudomonas putida GB-1, comple... 39 0.83
(Q5UQV1) RecName: Full=Uncharacterized protein R354; &AY653733_... 38 1.1
HQ336222_383(HQ336222|pid:none) Acanthamoeba polyphaga mimivirus... 38 1.1
JF801956_396(JF801956|pid:none) Acanthamoeba castellanii mamavir... 38 1.1
DQ491002_214(DQ491002|pid:none) Paramecium bursaria Chlorella vi... 38 1.1
CU469464_402(CU469464|pid:none) Candidatus Phytoplasma mali stra... 38 1.4
DQ491003_200(DQ491003|pid:none) Paramecium bursaria Chlorella vi... 37 3.2
HQ225832_54(HQ225832|pid:none) Tetrasphaera phage TJE1, complete... 37 3.2
CU469464_249(CU469464|pid:none) Candidatus Phytoplasma mali stra... 36 5.4
BX571868_267(BX571868|pid:none) Photorhabdus luminescens subsp. ... 36 5.4
HE575324_1365(HE575324|pid:none) Trypanosoma congolense IL3000 a... 35 7.0
CP001321_1070(CP001321|pid:none) Haemophilus parasuis SH0165, co... 35 7.0
>CP001154_1490(CP001154|pid:none) Laribacter hongkongensis HLHK9,
complete genome.
Length = 203
Score = 73.9 bits (180), Expect = 2e-11
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Frame = +3
Query: 666 YCKKAMEHGKHQEPIAREFYFNELETSIIEKGIFPLPGDKRIGCSPDGVIYTTVPGKDGV 845
+ AM+ G EP AR Y E + E G+ P G SPDG++ T
Sbjct: 56 FSNAAMQRGTELEPHARARYIIETGEIVTEVGLIDHPTIAGFGASPDGLVGDT------- 108
Query: 846 LQREGVIEIKCPLSTTNFSGLKNGR-KPDALANAQKIPLDYIPQIFANMACTGAQWCDYI 1022
G+IEIKCP + T+ +K G+ KP+ YI Q+ MACTG QWCD++
Sbjct: 109 ----GLIEIKCPNTWTHIETIKTGKPKPE-----------YIKQMQTQMACTGRQWCDFV 153
Query: 1023 CW---VPGEV-YFCRRV 1061
+ +P ++ YFC R+
Sbjct: 154 SYDDRLPDDMQYFCTRI 170
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 4,032,209,987
Number of extensions: 94755342
Number of successful extensions: 185231
Number of sequences better than 10.0: 71
Number of HSP's gapped: 185112
Number of HSP's successfully gapped: 72
Length of query: 425
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 290
Effective length of database: 1,010,438,449
Effective search space: 293027150210
Effective search space used: 293027150210
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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