Dictyostelium discoideum cDNA Clone CFJ231

Sequence CFJ231

ATTATATTAT ACTTCATATA AATAACTATC TCCAAATGAA ATTTTTATTA
AAAATTAATT TATTGATCTT TTTTTTTGTG AATTCCTGTA ACTCACATCA
CTATGTTGGT ATTATCGATG ACAATTCTAT AACTCCAAAC ATGCAATGGT
TTAACGATAT TATGTCCATT AGAAGAAACG CCAATGGTGC CTGGCCTAGA
GTTAATTCTT TTAATTGAAA CGGGGTATAC TTTGTTTTCG GGAATATGGC
TCCTCATGGA TTGACCTTGC TGTATATAGG TAAAGTATCC CATCAAGATG
GGATGGGTTT GTACCACAGA GGTTACTCAG ATATAGTTGG TCGCCCAAGG
TTTTGGGGGA CTCCAAATGC AAGACCACTA GAAATGGCAA ATGCCCAAAT
TTTAATGTAT TATAGAGGTT TTGATGGTCC AGTTGCTGGT CATGCTGAGT
GGTTCCTTTC AGTATTTGGG TGCCCAGAAA ATAGTTTCAA CGAGGGTGGT
TTAAAGGAAT CTCAATTTTG TTATGGTGCA GGTCAATGGA ATTTTTTCCA
TGCAACTGCT CCCGCAG--- -------AGC TGCTGCAATT GGAATTGATC
CATACACTTC ACAACATGAT TTAAAATTAA TATTAGCGAA AAAGAAAACC
CCATTCTTTA GTGACTACTG TAAAAAGGCA ATGGAACATG GTAAACACCA
AGAACCAATA GCAAGAGAAT TTTATTTTAA TGAATTGGAG ACTTCAATTA
TCGAAAAGGG TATCTTTCCA TTGCCAGGCG ACAAAAGAAT TGGATGTTCT
CCTGATGGGG TAATTTACAC AACAGTACCT GGTAAAGATG GAGTTTTACA
GCGTGAAGGA GTTATTGAAA TAAAATGTCC ACTATCTACC ACGAACTTCA
GTGGCCTAAA GAATGGTAGA AAACCTGATG CCTTAGCTAA TGCTCAGAAA
ATACCTCTAG ATTACATTCC ACAAATATTT GCAAACATGG CATGTACTGG
GGCACAATGG TGTGATTATA TATGTTGGGT TCCAGGTGAG GTATACTTTT
GTAGAAGGGT ATTCTTTGAT ACAAATGTAT TCGTTAGCAA AATTATTTAT
AGATACACCT TTAAATGAAA TACCTTAAAG AATGAAAAAA CATTAATAAT
AAATACATTA CTCTTACAGA AACTTAAAGT TTTAAATCCA CACCTAAATA
TTCATGTACG AACTAAATTA TCATATAGAA AAAAAGTTAT AAAAAAAAAT
AATAAAAAAT TTCGTNNATT GGGGGG

Translated Amino Acid Sequence CFJ231

yiilhinnylqmkfllkinllifffvnscnshhyvgiiddnsitpnmqwfndimsirrna
ngawprvnsfn*NGVYFVFGNMAPHGLTLLYIGKVSHQDGMGLYHRGYSDIVGRPRFWGT
PNARPLEMANAQILMYYRGFDGPVAGHAEWFLSVFGCPENSFNEGGLKESQFCYGAGQWN
FFHATAPA---

---AAAIGIDPYTSQHDLKLILAKKKTPFFSDYCKKAMEHGKHQEPIAREFYFNELETSI
IEKGIFPLPGDKRIGCSPDGVIYTTVPGKDGVLQREGVIEIKCPLSTTNFSGLKNGRKPD
ALANAQKIPLDYIPQIFANMACTGAQWCDYICWVPGEVYFCRRVFFDTNVFVSKIIYRYT
FK*ntlknektliintlllqklkvlnphlnihvrtklsyrkkvikknnkkfrxlg

Homology CFJ231 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFJ231 (CFJ231Q) /CSM/CF/CFJ2-B/CFJ231Q.Seq.d/                       2321   0.0
SFF131 (SFF131Q) /CSM/SF/SFF1-B/SFF131Q.Seq.d/                       1203   0.0
AFC162 (AFC162Q) /CSM/AF/AFC1-C/AFC162Q.Seq.d/                       1187   0.0
AFN861 (AFN861Q) /CSM/AF/AFN8-C/AFN861Q.Seq.d/                       1183   0.0
SFJ512 (SFJ512Q) /CSM/SF/SFJ5-A/SFJ512Q.Seq.d/                       1160   0.0
CHD730 (CHD730Q) /CSM/CH/CHD7-B/CHD730Q.Seq.d/                       1160   0.0
CFD588 (CFD588Q) /CSM/CF/CFD5-D/CFD588Q.Seq.d/                       1049   0.0
CHC128 (CHC128Q) /CSM/CH/CHC1-B/CHC128Q.Seq.d/                       1001   0.0
SHA540 (SHA540Q) /CSM/SH/SHA5-B/SHA540Q.Seq.d/                        515   e-145
CHL386 (CHL386Q) /CSM/CH/CHL3-D/CHL386Q.Seq.d/                        408   e-113

Homology CFJ231 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 ma...   835   0.0    4
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete ...    32   2e-04  17
AC005504|AC005504.3 Plasmodium falciparum chromosome 12, ***...    42   5e-04  11
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complete...    34   0.001  16
L06178|L06178.1 Apis mellifera ligustica complete mitochondr...    30   0.002  8
AP001118|AP001118.1 Buchnera aphidicola str. APS (Acyrthosip...    32   0.003  16
AB063522|AB063522.2 Wigglesworthia brevipalpis DNA, complete...    38   0.003  16
AX344551|AX344551.1 Sequence 2 from Patent WO0200932.              36   0.004  14
AX344573|AX344573.1 Sequence 24 from Patent WO0200932.             34   0.004  14
AL445565|AL445565.1 Mycoplasma pulmonis (strain UAB CTIP) co...    34   0.004  14

Homology CFJ231 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP001154_1490(CP001154|pid:none) Laribacter hongkongensis HLHK9,...    74   2e-11
BX640412_161(BX640412|pid:none) Bordetella pertussis strain Toha...    70   2e-10
BX640443_240(BX640443|pid:none) Bordetella bronchiseptica strain...    70   2e-10
FN545225_18(FN545225|pid:none) Arsenophonus nasoniae whole genom...    68   1e-09
CP001562_872(CP001562|pid:none) Bartonella grahamii as4aup, comp...    67   2e-09
FN645507_4(FN645507|pid:none) Bartonella schoenbuchensis R1 cont...    64   1e-08
FN645509_387(FN645509|pid:none) Bartonella schoenbuchensis R1 co...    64   1e-08
BX897699_671(BX897699|pid:none) Bartonella henselae strain Houst...    64   2e-08
CP001277_1425(CP001277|pid:none) Candidatus Hamiltonella defensa...    62   9e-08
CP001349_3671(CP001349|pid:none) Methylobacterium nodulans ORS 2...    61   2e-07

Homology CFJ231 vs Genome