Dictyostelium discoideum cDNA Clone CFI575

Sequence CFI575

AATTCAAAAA ATAATCAAAT AAATAAATAT AATATAAAAT GGATGGTGAA
GATGTTCAAG CTTTAGTAAT TGATAACGGT TCTGGTATGT GTAAAGCCGG
TTTTGCTGGT GATGATGCCC CACGTGCTGT TTTCCCATCA ATTGTTGGTC
GTCCAAGACA CACTGGTGTT ATGGTTGGTA TGGGTCAAAA AGATTCATAT
GTAGGTGATG AAGCTCAATC AAAAAGAGGT ATCTTAACCC TCAAATATCC
AATTGAACAC GGTATCGTTA CCAATTGGGA TGATATGGAA AAAATCTGGC
ACCATACTTT CTACAATGAA CTCCGTGTCG CACCAGAAGA ACACCCAGTT
CTCTTAACTG AAGCCCCATT AAATCCAAAA GCTAACAGAG AAAAAATGAC
TCAAATCATG TTTGAAACTT TCAATACTCC AGCCATGTAC GTTGCCATTC
AAGCTGTCTT ATCATTATAT GCATCTGGTC GTACCACTGG TATCGTTATG
GATTCAGGTG ATGGTGTCTC TCACACTGTT CCAATTTATG AAGGTTATGC
CTTAC----- -----TTATG CCTTACCACA CGCCATCTTA CGTTTAGATT
TAGCTGGTCG TGATCTTACT GATTACATGA TGAAAATCTT AACTGAACGT
GGTTACTCAT TCACCACCAC TGCTGAAAGA GAAATTGTCA GAGATATCAA
AGAAAAATTA GCCTACGTCG CTCTCGACTT TGAAGCTGAA ATGCAAACTG
CTGCTTCATC ATCAGCATTA GAAAAATCAT ACGAATTACC AGACGGTCAA
GTTATTACCA TCGGTAATGA ACGTTTCCGT TGTCCAGAAG CCCTCTTCCA
ACCATCATTC TTAGGTATGG AATCAGCTGG TATCCACGAA ACCACCTACA
ACTCCATCAT GAAATGTGAT GTCGATATCC GTAAAGATTT ATACGGTAAT
GTCGTCTTAT CAGGTGGTAC AACTATGTTC CCAGGTATTG CTGATCGTAT
GAACAAAGAA TTAACTGCAT TAGCACCATC AACCATGAAA ATTAAAATTA
TTGCACCACC AGAACGTAAA TACTCAGTTT GGATCGGTGG ATCTATTTTA
GCTTCACTCT CAACTTTCCA ACAAATGTGG ATCTCCAAAG AAGAATATGA
CGAATCAGGT CCATCAATTG TCCACAGAAA ATGTTTCTAA ACAATTAAAA
CCAGTGATGA AAGTGCTTCT CACACTTAAC AATATAATAT TTATATGTAT
AATAATAAAA TCTCAATAAA ATATAATTCT TATTTTTATT TT

Translated Amino Acid Sequence CFI575

fkk*snk*i*YKMDGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGM
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYE
GYAL---

---YALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEA
EMQTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKC
DVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSI
LASLSTFQQMWISKEEYDESGPSIVHRKCF*tiktsdesasht*qyniymynnkisikyn
syfyf

Homology CFI575 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFI575 (CFI575Q) /CSM/CF/CFI5-D/CFI575Q.Seq.d/                       2292   0.0
VFD511 (VFD511Q) /CSM/VF/VFD5-A/VFD511Q.Seq.d/                       1310   0.0
VFA470 (VFA470Q) /CSM/VF/VFA4-C/VFA470Q.Seq.d/                       1302   0.0
VFH562 (VFH562Q) /CSM/VF/VFH5-C/VFH562Q.Seq.d/                       1283   0.0
VFL506 (VFL506Q) /CSM/VF/VFL5-A/VFL506Q.Seq.d/                       1245   0.0
VFD357 (VFD357Q) /CSM/VF/VFD3-C/VFD357Q.Seq.d/                       1245   0.0
VFI430 (VFI430Q) /CSM/VF/VFI4-B/VFI430Q.Seq.d/                       1221   0.0
VFL794 (VFL794Q) /CSM/VF/VFL7-D/VFL794Q.Seq.d/                       1209   0.0
VFB771 (VFB771Q) /CSM/VF/VFB7-C/VFB771Q.Seq.d/                       1207   0.0
VFC602 (VFC602Q) /CSM/VF/VFC6-A/VFC602Q.Seq.d/                       1205   0.0

Homology CFI575 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...  1310   0.0    1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...  1134   0.0    6
M14146|M14146.1 D.discoideum actin 15 gene, complete cds.        1035   0.0    2
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma...   971   0.0    8
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma...   924   0.0    13
X03283|X03283.1 Dictyostelium discoideum gene for actin A3-S1.    718   0.0    2
AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 ma...  1035   0.0    2
X03281|X03281.1 Dictyostelium discoideum gene for actin A8.      1025   0.0    1
X03284|X03284.1 Dictyostelium discoideum gene for actin A3-S2.    484   0.0    4
X03282|X03282.1 dictyostelium discoideum gene for actin A12.      977   0.0    1

Homology CFI575 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54H30) RecName: Full=Major actin; AltName: Full=Actin A1; AltN...   751   0.0
(Q553U6) RecName: Full=Putative actin-22;  &AC116305_3(AC116305|...   747   0.0
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli...   745   0.0
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum)        745   0.0
(P02576) RecName: Full=Actin, plasmodial isoform;  &ATFY(A29044;...   744   0.0
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti...   744   0.0
(P07829) RecName: Full=Actin-3; AltName: Full=Actin-3-sub 1;          734   0.0
AK369759_1(AK369759|pid:none) Hordeum vulgare subsp. vulgare mRN...   733   0.0
AY294154_1(AY294154|pid:none) Thecamoeba similis actin mRNA, com...   732   0.0
(P02578) RecName: Full=Actin-1;  &ATAX(A92886;A03004) &V00002_1(...   730   0.0

Homology CFI575 vs Genome